RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 RNF217Q8TC41 542 aa9.76□□□□□ -0.85
UBE2N-204ENST00000549833 CNKSR1Q969H4 720 aa9.76□□□□□ -0.85
UBE2N-204ENST00000549833 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
UBE2N-204ENST00000549833 DNAAF2Q9NVR5 837 aaKnown RBP9.76□□□□□ -0.85
UBE2N-204ENST00000549833 RRBP1Q9P2E9 1410 aaKnown RBP9.75□□□□□ -0.85
UBE2N-204ENST00000549833 IL2RAP01589 272 aa9.75□□□□□ -0.85
UBE2N-204ENST00000549833 RNF144AP50876 292 aaPredicted RBP9.75□□□□□ -0.85
UBE2N-204ENST00000549833 SCNN1DP51172 638 aa9.75□□□□□ -0.85
UBE2N-204ENST00000549833 OGFOD1Q8N543 542 aa9.75□□□□□ -0.85
UBE2N-204ENST00000549833 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
UBE2N-204ENST00000549833 VRTNQ9H8Y1 702 aa9.75□□□□□ -0.85
UBE2N-204ENST00000549833 DNMT3LQ9UJW3 386 aa9.75□□□□□ -0.85
UBE2N-204ENST00000549833 RBM19Q9Y4C8 960 aaKnown RBP9.75□□□□□ -0.85
UBE2N-204ENST00000549833 ABCC5O15440 1437 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 DAPK1P53355 1430 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 MAGI2Q86UL8 1455 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 MLH3Q9UHC1 1453 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 FIGNL2A6NMB9 653 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 INHAP05111 366 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 RFX1P22670 979 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 SLC27A3Q5K4L6 730 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 LARP1Q6PKG0 1096 aaKnown RBP9.74□□□□□ -0.85
UBE2N-204ENST00000549833 XAGE2Q96GT9 111 aa9.74□□□□□ -0.85
UBE2N-204ENST00000549833 SPAG9O60271 1321 aaKnown RBP9.74□□□□□ -0.85
UBE2N-204ENST00000549833 CFAP65Q6ZU64 1925 aaKnown RBP9.74□□□□□ -0.85
UBE2N-204ENST00000549833 PLXNC1O60486 1568 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 STAU1O95793 577 aaKnown RBP9.73□□□□□ -0.85
UBE2N-204ENST00000549833 RASA1P20936 1047 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
UBE2N-204ENST00000549833 CLDN10P78369 228 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 TLR1Q15399 786 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 LYSMD3Q7Z3D4 306 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 LARGE2Q8N3Y3 721 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 TPCN2Q8NHX9 752 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 ZNF594Q96JF6 807 aaPredicted RBP9.73□□□□□ -0.85
UBE2N-204ENST00000549833 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
UBE2N-204ENST00000549833 SHANK2Q9UPX8 1470 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 FAM196BA6NMK8 535 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L15C9J2P7 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L10C9JJH3 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L13C9JLJ4 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L12C9JPN9 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L11C9JVI0 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L21D6R901 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L18D6R9N7 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L22D6RA61 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L17D6RBQ6 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L19D6RCP7 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L20D6RJB6 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 BACH1O14867 736 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 USP17L24Q0WX57 530 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 CCDC102BQ68D86 513 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 SIX5Q8N196 739 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
UBE2N-204ENST00000549833 BCORL1Q5H9F3 1711 aa9.71□□□□□ -0.85
UBE2N-204ENST00000549833 ITGAEP38570 1179 aa9.71□□□□□ -0.86
UBE2N-204ENST00000549833 CENPCQ03188 943 aa9.71□□□□□ -0.86
UBE2N-204ENST00000549833 ZSCAN10Q96SZ4 725 aaPredicted RBP9.71□□□□□ -0.86
UBE2N-204ENST00000549833 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
UBE2N-204ENST00000549833 RTEL1-TNFRSF6BF6WH68 1400 aa9.71□□□□□ -0.86
UBE2N-204ENST00000549833 PTPRKQ15262 1439 aa9.71□□□□□ -0.86
UBE2N-204ENST00000549833 ATP10AO60312 1499 aa9.71□□□□□ -0.86
UBE2N-204ENST00000549833 FER1L4A9Z1Z3 1794 aa9.7□□□□□ -0.86
UBE2N-204ENST00000549833 TSPY4P0CV99 314 aa9.7□□□□□ -0.86
UBE2N-204ENST00000549833 TSPY10P0CW01 314 aa9.7□□□□□ -0.86
UBE2N-204ENST00000549833 ARID3AQ99856 593 aa9.7□□□□□ -0.86
UBE2N-204ENST00000549833 ZNF358Q9NW07 568 aa9.7□□□□□ -0.86
UBE2N-204ENST00000549833 SERTAD1Q9UHV2 236 aa9.7□□□□□ -0.86
UBE2N-204ENST00000549833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
UBE2N-204ENST00000549833 REREQ9P2R6 1566 aa9.7□□□□□ -0.86
UBE2N-204ENST00000549833 PRICKLE2Q7Z3G6 844 aa9.69□□□□□ -0.86
UBE2N-204ENST00000549833 GCC2Q8IWJ2 1684 aa9.69□□□□□ -0.86
UBE2N-204ENST00000549833 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.69□□□□□ -0.86
UBE2N-204ENST00000549833 PBXIP1Q96AQ6 731 aa9.69□□□□□ -0.86
UBE2N-204ENST00000549833 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
UBE2N-204ENST00000549833 GRIP2Q9C0E4 1043 aa9.69□□□□□ -0.86
UBE2N-204ENST00000549833 ADGRL2O95490 1459 aa9.68□□□□□ -0.86
UBE2N-204ENST00000549833 A2MP01023 1474 aa9.68□□□□□ -0.86
UBE2N-204ENST00000549833 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-204ENST00000549833 ZBTB7BO15156 539 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-204ENST00000549833 PTK7Q13308 1070 aa9.68□□□□□ -0.86
UBE2N-204ENST00000549833 CRTC2Q53ET0 693 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-204ENST00000549833 GNASQ5JWF2 1037 aa9.68□□□□□ -0.86
UBE2N-204ENST00000549833 TMEM214Q6NUQ4 689 aaKnown RBP9.68□□□□□ -0.86
UBE2N-204ENST00000549833 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
UBE2N-204ENST00000549833 SPATA31C2B4DYI2 1134 aa9.67□□□□□ -0.86
UBE2N-204ENST00000549833 SMTNP53814 917 aa9.67□□□□□ -0.86
UBE2N-204ENST00000549833 CEP152O94986 1710 aa9.67□□□□□ -0.86
UBE2N-204ENST00000549833 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
UBE2N-204ENST00000549833 RIMS1Q86UR5 1692 aaKnown RBP9.67□□□□□ -0.86
UBE2N-204ENST00000549833 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
UBE2N-204ENST00000549833 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 ARID4BQ4LE39 1312 aaPredicted RBP9.66□□□□□ -0.86
UBE2N-204ENST00000549833 A6NJY4 79 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 M0R2N6 131 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 SEC13P55735 322 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 TAS1R3Q7RTX0 852 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms