RNA–Protein interactions for RNA: ENST00000546328.1

ACACB-215, Transcript of acetyl-CoA carboxylase beta, human

TSL 3

Gene ACACB, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACB-215	ENST00000546328	ARHGAP45	Q92619	1136 aa		10.19	□□□□□ -0.78
ACACB-215	ENST00000546328	SMC4	Q9NTJ3	1288 aa		10.19	□□□□□ -0.78
ACACB-215	ENST00000546328	KIAA1551	Q9HCM1	1747 aa		10.19	□□□□□ -0.78
ACACB-215	ENST00000546328	PCNT	O95613	3336 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	NBPF26	B4DH59	902 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	KIF3C	O14782	793 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	IPO8	O15397	1037 aa	Known RBP	10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	RPS6KA4	O75676	772 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	SLC4A2	P04920	1241 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	ADRA2B	P18089	450 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	SSFA2	P28290	1259 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	NBPF10	Q6P3W6	841 aa	Known RBP	10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	NBPF15	Q8N660	670 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	CHPF2	Q9P2E5	772 aa		10.18	□□□□□ -0.78
ACACB-215	ENST00000546328	PXDNL	A1KZ92	1463 aa		10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	RNF123	Q5XPI4	1314 aa		10.17	□□□□□ -0.78
ACACB-215	ENST00000546328		A0A087WZG4	1122 aa		10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	GNPAT	O15228	680 aa		10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	A1BG	P04217	495 aa		10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	MS4A1	P11836	297 aa		10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	EIF5	P55010	431 aa	Known RBP	10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	ZBTB1	Q9Y2K1	713 aa		10.17	□□□□□ -0.78
ACACB-215	ENST00000546328	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	DDX58	O95786	925 aa	Known RBP	10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	MMP10	P09238	476 aa		10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	FLII	Q13045	1269 aa		10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	NPM2	Q86SE8	214 aa	Known RBP	10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	NECTIN2	Q92692	538 aa		10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	API5	Q9BZZ5	524 aa	Known RBP	10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	RTCB	Q9Y3I0	505 aa	Known RBP	10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	BCOR	Q6W2J9	1755 aa		10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	C4A	P0C0L4	1744 aa		10.16	□□□□□ -0.78
ACACB-215	ENST00000546328	COL15A1	P39059	1388 aa		10.15	□□□□□ -0.78
ACACB-215	ENST00000546328	BCAR3	O75815	825 aa		10.15	□□□□□ -0.78
ACACB-215	ENST00000546328	PROSER3	Q2NL68	480 aa		10.15	□□□□□ -0.78
ACACB-215	ENST00000546328	ANKRD36C	Q5JPF3	1778 aa		10.15	□□□□□ -0.78
ACACB-215	ENST00000546328	ARFGEF2	Q9Y6D5	1785 aa		10.15	□□□□□ -0.78
ACACB-215	ENST00000546328	SCN7A	Q01118	1682 aa		10.15	□□□□□ -0.79
ACACB-215	ENST00000546328	NUP98	P52948	1817 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	KIF13B	Q9NQT8	1826 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328		A0A0G2JLW4	131 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	ERVV-1	B6SEH8	477 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	MYL6B	P14649	208 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	CANX	P27824	592 aa	Known RBP	10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	PDE3A	Q14432	1141 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	ZKSCAN2	Q63HK3	967 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	ATF7IP	Q6VMQ6	1270 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	KIF6	Q6ZMV9	814 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	COPS6	Q7L5N1	327 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	PLBD2	Q8NHP8	589 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	BCL2L13	Q9BXK5	485 aa		10.14	□□□□□ -0.79
ACACB-215	ENST00000546328	TCERG1	O14776	1098 aa	Known RBP	10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	RRP1	P56182	461 aa	Known RBP	10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	FKBP5	Q13451	457 aa	Predicted RBP	10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	TRAPPC3L	Q5T215	181 aa		10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	KSR2	Q6VAB6	950 aa		10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	ANKRD13D	Q6ZTN6	518 aa		10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	G2E3	Q7L622	706 aa		10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	XAGE3	Q8WTP9	111 aa		10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	PHAX	Q9H814	394 aa	Known RBP	10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	NOB1	Q9ULX3	412 aa	Known RBP	10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	BCS1L	Q9Y276	419 aa		10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	C10orf71	Q711Q0	1435 aa		10.13	□□□□□ -0.79
ACACB-215	ENST00000546328	MAP3K15	Q6ZN16	1313 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	ANXA1	P04083	346 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	TRIM27	P14373	513 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	DPEP1	P16444	411 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	HSP90AB3P	Q58FF7	597 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	CLEC4G	Q6UXB4	293 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	DZIP3	Q86Y13	1208 aa	Known RBP	10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	DNAJC5G	Q8N7S2	189 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	NMRK2	Q9NPI5	230 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	NARF	Q9UHQ1	456 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	ZNF652	Q9Y2D9	606 aa		10.12	□□□□□ -0.79
ACACB-215	ENST00000546328	ABCC4	O15439	1325 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	PI4KAP2	A4QPH2	592 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	CAMTA2	O94983	1202 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	GYS1	P13807	737 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	RFC4	P35249	363 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	PIP4K2A	P48426	406 aa	Predicted RBP	10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	TTLL7	Q6ZT98	887 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	PI4KAP1	Q8N8J0	262 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	DNAAF4	Q8WXU2	420 aa		10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	FRAT1	Q92837	279 aa	Predicted RBP	10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	ARHGEF1	Q92888	912 aa	Known RBP	10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	METTL22	Q9BUU2	404 aa	Predicted RBP	10.11	□□□□□ -0.79
ACACB-215	ENST00000546328	BRCA1	P38398	1863 aa	Known RBP	10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	USP42	Q9H9J4	1324 aa	Known RBP	10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	ZPR1	O75312	459 aa		10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	KCNA3	P22001	575 aa		10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	CCT4	P50991	539 aa	Known RBP	10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	TGFB2	P61812	414 aa		10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	HTRA3	P83110	453 aa		10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	NEXN	Q0ZGT2	675 aa		10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	AIMP1	Q12904	312 aa	Known RBP	10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	TRIM28	Q13263	835 aa	Known RBP	10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	INTS3	Q68E01	1043 aa	Known RBP	10.1	□□□□□ -0.79
ACACB-215	ENST00000546328	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms