RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 PHKG2P15735 406 aa13.97□□□□□ -0.17
DDB1-224ENST00000545894 PDLIM2Q96JY6 352 aa13.97□□□□□ -0.17
DDB1-224ENST00000545894 LRRC37A3O60309 1634 aa13.97□□□□□ -0.17
DDB1-224ENST00000545894 PKD1L3Q7Z443 1732 aa13.97□□□□□ -0.17
DDB1-224ENST00000545894 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
DDB1-224ENST00000545894 PDE1AP54750 535 aa13.97□□□□□ -0.17
DDB1-224ENST00000545894 MARCH10Q8NA82 808 aaPredicted RBP13.97□□□□□ -0.17
DDB1-224ENST00000545894 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
DDB1-224ENST00000545894 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
DDB1-224ENST00000545894 RBM27Q9P2N5 1060 aaKnown RBP13.96□□□□□ -0.17
DDB1-224ENST00000545894 MCM2P49736 904 aa13.95□□□□□ -0.18
DDB1-224ENST00000545894 AKAP4Q5JQC9 854 aa13.95□□□□□ -0.18
DDB1-224ENST00000545894 IFNL2Q8IZJ0 200 aa13.95□□□□□ -0.18
DDB1-224ENST00000545894 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
DDB1-224ENST00000545894 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
DDB1-224ENST00000545894 TERF1P54274 439 aa13.95□□□□□ -0.18
DDB1-224ENST00000545894 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
DDB1-224ENST00000545894 LRSAM1Q6UWE0 723 aa13.95□□□□□ -0.18
DDB1-224ENST00000545894 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
DDB1-224ENST00000545894 NEK4P51957 841 aa13.94□□□□□ -0.18
DDB1-224ENST00000545894 TMX3Q96JJ7 454 aa13.94□□□□□ -0.18
DDB1-224ENST00000545894 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
DDB1-224ENST00000545894 MBD3O95983 291 aa13.94□□□□□ -0.18
DDB1-224ENST00000545894 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
DDB1-224ENST00000545894 TMEM63CQ9P1W3 806 aa13.94□□□□□ -0.18
DDB1-224ENST00000545894 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
DDB1-224ENST00000545894 ZNF500O60304 480 aaPredicted RBP13.93□□□□□ -0.18
DDB1-224ENST00000545894 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
DDB1-224ENST00000545894 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
DDB1-224ENST00000545894 MPRIPQ6WCQ1 1025 aa13.93□□□□□ -0.18
DDB1-224ENST00000545894 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
DDB1-224ENST00000545894 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
DDB1-224ENST00000545894 MCCP23508 829 aa13.93□□□□□ -0.18
DDB1-224ENST00000545894 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
DDB1-224ENST00000545894 SYCE3A1L190 88 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 GNAI2P04899 355 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 ESYT1Q9BSJ8 1104 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 F6X3S4 739 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 BRD1O95696 1058 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 CUL4AQ13619 759 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 G2E3Q7L622 706 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
DDB1-224ENST00000545894 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
DDB1-224ENST00000545894 KDM6AO15550 1401 aaPredicted RBP13.91□□□□□ -0.18
DDB1-224ENST00000545894 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
DDB1-224ENST00000545894 HTATSF1O43719 755 aaKnown RBP13.91□□□□□ -0.18
DDB1-224ENST00000545894 ANAPC15P60006 121 aa13.91□□□□□ -0.18
DDB1-224ENST00000545894 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
DDB1-224ENST00000545894 PDCL3Q9H2J4 239 aa13.91□□□□□ -0.18
DDB1-224ENST00000545894 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.91□□□□□ -0.18
DDB1-224ENST00000545894 NSFL1CQ9UNZ2 370 aaKnown RBP13.91□□□□□ -0.18
DDB1-224ENST00000545894 MCM5P33992 734 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 FOXD4L5Q5VV16 416 aaPredicted RBP13.9□□□□□ -0.18
DDB1-224ENST00000545894 FOXD4L4Q8WXT5 416 aaPredicted RBP13.9□□□□□ -0.18
DDB1-224ENST00000545894 RTF1Q92541 710 aaKnown RBP13.9□□□□□ -0.18
DDB1-224ENST00000545894 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
DDB1-224ENST00000545894 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 TSPYL4Q9UJ04 414 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 ZKSCAN5Q9Y2L8 839 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 MX1P20591 662 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 BRWD3Q6RI45 1802 aa13.9□□□□□ -0.18
DDB1-224ENST00000545894 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
DDB1-224ENST00000545894 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
DDB1-224ENST00000545894 TSHZ3Q63HK5 1081 aa13.89□□□□□ -0.19
DDB1-224ENST00000545894 GNAI3P08754 354 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 CHMLP26374 656 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 ACSBG1Q96GR2 724 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 STK31Q9BXU1 1019 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 ANO2Q9NQ90 1003 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 PALD1Q9ULE6 856 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
DDB1-224ENST00000545894 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
DDB1-224ENST00000545894 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
DDB1-224ENST00000545894 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
DDB1-224ENST00000545894 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
DDB1-224ENST00000545894 ERVV-2B6SEH9 535 aa13.87□□□□□ -0.19
DDB1-224ENST00000545894 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
DDB1-224ENST00000545894 RILPL2Q969X0 211 aa13.87□□□□□ -0.19
DDB1-224ENST00000545894 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
DDB1-224ENST00000545894 BCL9O00512 1426 aa13.87□□□□□ -0.19
DDB1-224ENST00000545894 ADAMTS7Q9UKP4 1686 aa13.86□□□□□ -0.19
DDB1-224ENST00000545894 KCNQ2O43526 872 aa13.86□□□□□ -0.19
DDB1-224ENST00000545894 FAM196AQ6ZSG2 479 aa13.86□□□□□ -0.19
DDB1-224ENST00000545894 NFATC2IPQ8NCF5 419 aa13.86□□□□□ -0.19
DDB1-224ENST00000545894 TSPY26PQ9H489 355 aa13.86□□□□□ -0.19
DDB1-224ENST00000545894 PNMA6EA0A0J9YXQ4 647 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 CABP4P57796 275 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 NOL8Q76FK4 1167 aaKnown RBP13.85□□□□□ -0.19
DDB1-224ENST00000545894 PTF1AQ7RTS3 328 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 RNF214Q8ND24 703 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 SLC52A2Q9HAB3 445 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 TOGARAM1Q9Y4F4 1720 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 EPB41L2O43491 1005 aaKnown RBP13.85□□□□□ -0.19
DDB1-224ENST00000545894 FLIIQ13045 1269 aa13.85□□□□□ -0.19
DDB1-224ENST00000545894 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms