RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 USPL1Q5W0Q7 1092 aa15.02■□□□□ -0
SNHG1-221ENST00000544983 ANKRD13DQ6ZTN6 518 aa15.02■□□□□ -0
SNHG1-221ENST00000544983 PLBD2Q8NHP8 589 aa15.02■□□□□ -0
SNHG1-221ENST00000544983 C4AP0C0L4 1744 aa15.02□□□□□ -0.01
SNHG1-221ENST00000544983 ANXA1P04083 346 aa15.01□□□□□ -0.01
SNHG1-221ENST00000544983 RARSP54136 660 aaKnown RBP15.01□□□□□ -0.01
SNHG1-221ENST00000544983 AIMP1Q12904 312 aaKnown RBP15.01□□□□□ -0.01
SNHG1-221ENST00000544983 FLIIQ13045 1269 aa15.01□□□□□ -0.01
SNHG1-221ENST00000544983 GIGYF2Q6Y7W6 1299 aaKnown RBP15.01□□□□□ -0.01
SNHG1-221ENST00000544983 SSH1Q8WYL5 1049 aa15.01□□□□□ -0.01
SNHG1-221ENST00000544983 PTPRCP08575 1304 aa15□□□□□ -0.01
SNHG1-221ENST00000544983 TTLL7Q6ZT98 887 aa15□□□□□ -0.01
SNHG1-221ENST00000544983 SMIM5Q71RC9 77 aa15□□□□□ -0.01
SNHG1-221ENST00000544983 MRPL50Q8N5N7 158 aaKnown RBP15□□□□□ -0.01
SNHG1-221ENST00000544983 SPON1Q9HCB6 807 aa15□□□□□ -0.01
SNHG1-221ENST00000544983 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
SNHG1-221ENST00000544983 SRP68Q9UHB9 627 aaKnown RBP15□□□□□ -0.01
SNHG1-221ENST00000544983 KIF16BQ96L93 1317 aa14.99□□□□□ -0.01
SNHG1-221ENST00000544983 POLD1P28340 1107 aa14.99□□□□□ -0.01
SNHG1-221ENST00000544983 KSR2Q6VAB6 950 aa14.99□□□□□ -0.01
SNHG1-221ENST00000544983 RIC3Q7Z5B4 369 aa14.99□□□□□ -0.01
SNHG1-221ENST00000544983 PDGFDQ9GZP0 370 aaPredicted RBP14.99□□□□□ -0.01
SNHG1-221ENST00000544983 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
SNHG1-221ENST00000544983 SCN7AQ01118 1682 aa14.99□□□□□ -0.01
SNHG1-221ENST00000544983 TCERG1O14776 1098 aaKnown RBP14.98□□□□□ -0.01
SNHG1-221ENST00000544983 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
SNHG1-221ENST00000544983 ZBTB7AO95365 584 aa14.98□□□□□ -0.01
SNHG1-221ENST00000544983 FKBP5Q13451 457 aaPredicted RBP14.98□□□□□ -0.01
SNHG1-221ENST00000544983 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
SNHG1-221ENST00000544983 SETDB2Q96T68 719 aa14.98□□□□□ -0.01
SNHG1-221ENST00000544983 ZBTB3Q9H5J0 574 aa14.98□□□□□ -0.01
SNHG1-221ENST00000544983 BCL2L12Q9HB09 334 aa14.98□□□□□ -0.01
SNHG1-221ENST00000544983 ATP10DQ9P241 1426 aa14.98□□□□□ -0.01
SNHG1-221ENST00000544983 BCORQ6W2J9 1755 aa14.98□□□□□ -0.01
SNHG1-221ENST00000544983 TM4SF1P30408 202 aa14.97□□□□□ -0.01
SNHG1-221ENST00000544983 TRIM28Q13263 835 aaKnown RBP14.97□□□□□ -0.01
SNHG1-221ENST00000544983 FKBP8Q14318 412 aa14.97□□□□□ -0.01
SNHG1-221ENST00000544983 PARP10Q53GL7 1025 aa14.97□□□□□ -0.01
SNHG1-221ENST00000544983 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
SNHG1-221ENST00000544983 PI4KAP2A4QPH2 592 aa14.96□□□□□ -0.01
SNHG1-221ENST00000544983 NEXNQ0ZGT2 675 aa14.96□□□□□ -0.01
SNHG1-221ENST00000544983 TCIRG1Q13488 830 aa14.96□□□□□ -0.01
SNHG1-221ENST00000544983 G2E3Q7L622 706 aa14.96□□□□□ -0.01
SNHG1-221ENST00000544983 PI4KAP1Q8N8J0 262 aa14.96□□□□□ -0.01
SNHG1-221ENST00000544983 METTL22Q9BUU2 404 aaPredicted RBP14.96□□□□□ -0.01
SNHG1-221ENST00000544983 RCAN3Q9UKA8 241 aa14.96□□□□□ -0.01
SNHG1-221ENST00000544983 PARP3Q9Y6F1 533 aa14.96□□□□□ -0.01
SNHG1-221ENST00000544983 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
SNHG1-221ENST00000544983 NUP98P52948 1817 aa14.95□□□□□ -0.02
SNHG1-221ENST00000544983 MMP10P09238 476 aa14.95□□□□□ -0.02
SNHG1-221ENST00000544983 NFIXQ14938 502 aa14.95□□□□□ -0.02
SNHG1-221ENST00000544983 HLFQ16534 295 aa14.95□□□□□ -0.02
SNHG1-221ENST00000544983 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
SNHG1-221ENST00000544983 DNAAF4Q8WXU2 420 aa14.95□□□□□ -0.02
SNHG1-221ENST00000544983 API5Q9BZZ5 524 aaKnown RBP14.95□□□□□ -0.02
SNHG1-221ENST00000544983 NIP7Q9Y221 180 aaKnown RBP eCLIP14.95□□□□□ -0.026e-44■■■■□ 24.8
SNHG1-221ENST00000544983 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
SNHG1-221ENST00000544983 RNF123Q5XPI4 1314 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 TBC1D9BQ66K14 1250 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 MSL1Q68DK7 614 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 PPP1R42Q7Z4L9 355 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 SGIP1Q9BQI5 828 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 BCL2L13Q9BXK5 485 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 NYXQ9GZU5 481 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 MAP3K2Q9Y2U5 619 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 ADCY9O60503 1353 aa14.94□□□□□ -0.02
SNHG1-221ENST00000544983 IBTKQ9P2D0 1353 aaPredicted RBP14.94□□□□□ -0.02
SNHG1-221ENST00000544983 POLRMTO00411 1230 aaKnown RBP14.93□□□□□ -0.02
SNHG1-221ENST00000544983 PTGER2P43116 358 aa14.93□□□□□ -0.02
SNHG1-221ENST00000544983 TPTE2Q6XPS3 522 aa14.93□□□□□ -0.02
SNHG1-221ENST00000544983 CCDC191Q8NCU4 936 aa14.93□□□□□ -0.02
SNHG1-221ENST00000544983 ISCA1Q9BUE6 129 aa14.93□□□□□ -0.02
SNHG1-221ENST00000544983 NOB1Q9ULX3 412 aaKnown RBP14.93□□□□□ -0.02
SNHG1-221ENST00000544983 MS4A1P11836 297 aa14.92□□□□□ -0.02
SNHG1-221ENST00000544983 HSP90B1P14625 803 aaKnown RBP14.92□□□□□ -0.02
SNHG1-221ENST00000544983 LINS1Q8NG48 757 aa14.92□□□□□ -0.02
SNHG1-221ENST00000544983 ARFGEF2Q9Y6D5 1785 aa14.91□□□□□ -0.02
SNHG1-221ENST00000544983 BCAR3O75815 825 aa14.91□□□□□ -0.02
SNHG1-221ENST00000544983 SERPINB2P05120 415 aa14.91□□□□□ -0.02
SNHG1-221ENST00000544983 ZKSCAN2Q63HK3 967 aa14.91□□□□□ -0.02
SNHG1-221ENST00000544983 ATF7IPQ6VMQ6 1270 aa14.91□□□□□ -0.02
SNHG1-221ENST00000544983 BICDL1Q6ZP65 573 aa14.91□□□□□ -0.02
SNHG1-221ENST00000544983 NLRP10Q86W26 655 aa14.91□□□□□ -0.02
SNHG1-221ENST00000544983 NBPF5PQ86XG9 351 aaPredicted RBP14.91□□□□□ -0.02
SNHG1-221ENST00000544983 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.91□□□□□ -0.02
SNHG1-221ENST00000544983 ALDH1L1O75891 902 aa14.9□□□□□ -0.02
SNHG1-221ENST00000544983 GPTP24298 496 aa14.9□□□□□ -0.02
SNHG1-221ENST00000544983 DDR1Q08345 913 aa14.9□□□□□ -0.02
SNHG1-221ENST00000544983 CNBD1Q8NA66 436 aa14.9□□□□□ -0.02
SNHG1-221ENST00000544983 MYD88Q99836 296 aa14.9□□□□□ -0.02
SNHG1-221ENST00000544983 UTP14AQ9BVJ6 771 aaKnown RBP14.9□□□□□ -0.02
SNHG1-221ENST00000544983 CWC25Q9NXE8 425 aaPredicted RBP14.9□□□□□ -0.02
SNHG1-221ENST00000544983 PDZRN3Q9UPQ7 1066 aa14.9□□□□□ -0.02
SNHG1-221ENST00000544983 ANKRD36CQ5JPF3 1778 aa14.9□□□□□ -0.02
SNHG1-221ENST00000544983 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
SNHG1-221ENST00000544983 NPHP1O15259 732 aa14.89□□□□□ -0.03
SNHG1-221ENST00000544983 GTF2E1P29083 439 aaPredicted RBP14.89□□□□□ -0.03
SNHG1-221ENST00000544983 CCT4P50991 539 aaKnown RBP14.89□□□□□ -0.03
SNHG1-221ENST00000544983 ST5P78524 1137 aa14.89□□□□□ -0.03
SNHG1-221ENST00000544983 BEND3Q5T5X7 828 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms