RNA–Protein interactions for RNA: ENST00000544868.2

MALAT1-203, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-203ENST00000544868 MS4A4AQ96JQ5 239 aa11.8□□□□□ -0.52
MALAT1-203ENST00000544868 HACL1Q9UJ83 578 aa11.8□□□□□ -0.52
MALAT1-203ENST00000544868 BRCA2P51587 3418 aa11.79□□□□□ -0.52
MALAT1-203ENST00000544868 GYS1P13807 737 aa11.79□□□□□ -0.52
MALAT1-203ENST00000544868 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
MALAT1-203ENST00000544868 SAGE1Q9NXZ1 904 aa11.79□□□□□ -0.52
MALAT1-203ENST00000544868 RAPGEFL1Q9UHV5 662 aa11.79□□□□□ -0.52
MALAT1-203ENST00000544868 SPTBN5Q9NRC6 3674 aaKnown RBP11.78□□□□□ -0.52
MALAT1-203ENST00000544868 DLEC1Q9Y238 1755 aa11.78□□□□□ -0.52
MALAT1-203ENST00000544868 POTEFA5A3E0 1075 aa11.78□□□□□ -0.52
MALAT1-203ENST00000544868 AKAP4Q5JQC9 854 aa11.78□□□□□ -0.52
MALAT1-203ENST00000544868 CST9Q5W186 159 aa11.78□□□□□ -0.52
MALAT1-203ENST00000544868 SAPCD2Q86UD0 394 aa11.78□□□□□ -0.52
MALAT1-203ENST00000544868 TTC28Q96AY4 2481 aa11.78□□□□□ -0.52
MALAT1-203ENST00000544868 KIAA0100Q14667 2235 aaKnown RBP11.78□□□□□ -0.52
MALAT1-203ENST00000544868 MAP2P11137 1827 aaKnown RBP11.77□□□□□ -0.52
MALAT1-203ENST00000544868 G3V3G9 751 aa11.77□□□□□ -0.53
MALAT1-203ENST00000544868 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
MALAT1-203ENST00000544868 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
MALAT1-203ENST00000544868 ANKRD24Q8TF21 1146 aa11.77□□□□□ -0.53
MALAT1-203ENST00000544868 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
MALAT1-203ENST00000544868 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
MALAT1-203ENST00000544868 NOGQ13253 232 aa11.76□□□□□ -0.53
MALAT1-203ENST00000544868 TTLL6Q8N841 843 aa11.76□□□□□ -0.53
MALAT1-203ENST00000544868 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
MALAT1-203ENST00000544868 ZIC5Q96T25 663 aa11.76□□□□□ -0.53
MALAT1-203ENST00000544868 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
MALAT1-203ENST00000544868 CCDC24Q8N4L8 307 aa11.75□□□□□ -0.53
MALAT1-203ENST00000544868 ZCRB1Q8TBF4 217 aaKnown RBP11.75□□□□□ -0.53
MALAT1-203ENST00000544868 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
MALAT1-203ENST00000544868 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
MALAT1-203ENST00000544868 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
MALAT1-203ENST00000544868 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.74□□□□□ -0.53
MALAT1-203ENST00000544868 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
MALAT1-203ENST00000544868 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
MALAT1-203ENST00000544868 H0YGN5 161 aa11.73□□□□□ -0.53
MALAT1-203ENST00000544868 TRAF5O00463 557 aa11.73□□□□□ -0.53
MALAT1-203ENST00000544868 TRPA1O75762 1119 aa11.73□□□□□ -0.53
MALAT1-203ENST00000544868 SIK1P57059 783 aa11.73□□□□□ -0.53
MALAT1-203ENST00000544868 DDR1Q08345 913 aa11.73□□□□□ -0.53
MALAT1-203ENST00000544868 RNF123Q5XPI4 1314 aa11.73□□□□□ -0.53
MALAT1-203ENST00000544868 AKAP11Q9UKA4 1901 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 INSRP06213 1382 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 PPP1R37O75864 691 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 ITPK1Q13572 414 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
MALAT1-203ENST00000544868 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
MALAT1-203ENST00000544868 TAOK3Q9H2K8 898 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 RNF186Q9NXI6 227 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 LAMA3Q16787 3333 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 LTN1O94822 1766 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 PAPPA2Q9BXP8 1791 aa11.72□□□□□ -0.53
MALAT1-203ENST00000544868 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
MALAT1-203ENST00000544868 LTBP3Q9NS15 1303 aa11.71□□□□□ -0.53
MALAT1-203ENST00000544868 RFC4P35249 363 aa11.71□□□□□ -0.53
MALAT1-203ENST00000544868 RBBP6Q7Z6E9 1792 aaKnown RBP11.71□□□□□ -0.54
MALAT1-203ENST00000544868 FAM208AQ9UK61 1670 aaKnown RBP11.71□□□□□ -0.54
MALAT1-203ENST00000544868 ITGB4P16144 1822 aa11.7□□□□□ -0.54
MALAT1-203ENST00000544868 FBXO46Q6PJ61 603 aaPredicted RBP11.7□□□□□ -0.54
MALAT1-203ENST00000544868 HDAC9Q9UKV0 1011 aa11.7□□□□□ -0.54
MALAT1-203ENST00000544868 PIEZO1Q92508 2521 aa11.69□□□□□ -0.54
MALAT1-203ENST00000544868 ZNF541Q9H0D2 1346 aa11.69□□□□□ -0.54
MALAT1-203ENST00000544868 CELF2O95319 508 aaKnown RBP11.69□□□□□ -0.54
MALAT1-203ENST00000544868 STXBP5LQ9Y2K9 1186 aa11.69□□□□□ -0.54
MALAT1-203ENST00000544868 ATP6V1AP38606 617 aa11.68□□□□□ -0.54
MALAT1-203ENST00000544868 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
MALAT1-203ENST00000544868 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
MALAT1-203ENST00000544868 C21orf2O43822 256 aa11.67□□□□□ -0.54
MALAT1-203ENST00000544868 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
MALAT1-203ENST00000544868 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
MALAT1-203ENST00000544868 SOX1O00570 391 aaPredicted RBP11.66□□□□□ -0.54
MALAT1-203ENST00000544868 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
MALAT1-203ENST00000544868 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
MALAT1-203ENST00000544868 LRCH3Q96II8 777 aa11.66□□□□□ -0.54
MALAT1-203ENST00000544868 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
MALAT1-203ENST00000544868 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
MALAT1-203ENST00000544868 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
MALAT1-203ENST00000544868 MAMSTRQ6ZN01 415 aa11.64□□□□□ -0.55
MALAT1-203ENST00000544868 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
MALAT1-203ENST00000544868 C3orf67Q6ZVT6 689 aa11.64□□□□□ -0.55
MALAT1-203ENST00000544868 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
MALAT1-203ENST00000544868 PIGBQ92521 554 aa11.64□□□□□ -0.55
MALAT1-203ENST00000544868 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
MALAT1-203ENST00000544868 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
MALAT1-203ENST00000544868 ITGAEP38570 1179 aa11.63□□□□□ -0.55
MALAT1-203ENST00000544868 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
MALAT1-203ENST00000544868 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
MALAT1-203ENST00000544868 H0YIN7 160 aa11.62□□□□□ -0.55
MALAT1-203ENST00000544868 EN2P19622 333 aaPredicted RBP11.62□□□□□ -0.55
MALAT1-203ENST00000544868 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
MALAT1-203ENST00000544868 LTV1Q96GA3 475 aaPredicted RBP11.62□□□□□ -0.55
MALAT1-203ENST00000544868 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
MALAT1-203ENST00000544868 MUC3AQ02505 3323 aa11.62□□□□□ -0.55
MALAT1-203ENST00000544868 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
MALAT1-203ENST00000544868 RPS6KA4O75676 772 aa11.61□□□□□ -0.55
MALAT1-203ENST00000544868 DEFB123Q8N688 67 aa11.61□□□□□ -0.55
MALAT1-203ENST00000544868 PRO3102Q9H379 93 aa11.61□□□□□ -0.55
MALAT1-203ENST00000544868 ZNF408Q9H9D4 720 aa11.61□□□□□ -0.55
MALAT1-203ENST00000544868 SCUBE2Q9NQ36 999 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms