RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
LTBR-213ENST00000544454 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
LTBR-213ENST00000544454 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
LTBR-213ENST00000544454 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
LTBR-213ENST00000544454 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
LTBR-213ENST00000544454 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
LTBR-213ENST00000544454 E9PSI1 815 aa17.68■□□□□ 0.42
LTBR-213ENST00000544454 ANXA1P04083 346 aa17.68■□□□□ 0.42
LTBR-213ENST00000544454 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
LTBR-213ENST00000544454 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
LTBR-213ENST00000544454 COPS6Q7L5N1 327 aa17.68■□□□□ 0.42
LTBR-213ENST00000544454 SERPINB2P05120 415 aa17.67■□□□□ 0.42
LTBR-213ENST00000544454 HLFQ16534 295 aa17.67■□□□□ 0.42
LTBR-213ENST00000544454 XAGE3Q8WTP9 111 aa17.67■□□□□ 0.42
LTBR-213ENST00000544454 EXOSC9Q06265 439 aaKnown RBP17.66■□□□□ 0.42
LTBR-213ENST00000544454 SLFN5Q08AF3 891 aa17.66■□□□□ 0.42
LTBR-213ENST00000544454 VAMP4O75379 141 aa17.65■□□□□ 0.42
LTBR-213ENST00000544454 TGFB2P61812 414 aa17.65■□□□□ 0.42
LTBR-213ENST00000544454 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
LTBR-213ENST00000544454 GIGYF2Q6Y7W6 1299 aaKnown RBP17.65■□□□□ 0.42
LTBR-213ENST00000544454 ZBTB3Q9H5J0 574 aa17.65■□□□□ 0.42
LTBR-213ENST00000544454 CARMIL3Q8ND23 1372 aa17.65■□□□□ 0.42
LTBR-213ENST00000544454 NLGN2Q8NFZ4 835 aa17.64■□□□□ 0.41
LTBR-213ENST00000544454 NIP7Q9Y221 180 aaKnown RBP eCLIP17.64■□□□□ 0.41
LTBR-213ENST00000544454 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
LTBR-213ENST00000544454 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
LTBR-213ENST00000544454 C10orf71Q711Q0 1435 aa17.63■□□□□ 0.41
LTBR-213ENST00000544454 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
LTBR-213ENST00000544454 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
LTBR-213ENST00000544454 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
LTBR-213ENST00000544454 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
LTBR-213ENST00000544454 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
LTBR-213ENST00000544454 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
LTBR-213ENST00000544454 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
LTBR-213ENST00000544454 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
LTBR-213ENST00000544454 CDCA7LQ96GN5 454 aa17.61■□□□□ 0.41
LTBR-213ENST00000544454 ATP10DQ9P241 1426 aa17.61■□□□□ 0.41
LTBR-213ENST00000544454 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
LTBR-213ENST00000544454 PRR5LQ6MZQ0 368 aa17.6■□□□□ 0.41
LTBR-213ENST00000544454 NBPF5PQ86XG9 351 aaPredicted RBP17.6■□□□□ 0.41
LTBR-213ENST00000544454 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
LTBR-213ENST00000544454 BRIP1Q9BX63 1249 aa17.6■□□□□ 0.41
LTBR-213ENST00000544454 PHAXQ9H814 394 aaKnown RBP17.6■□□□□ 0.41
LTBR-213ENST00000544454 TCIRG1Q13488 830 aa17.59■□□□□ 0.41
LTBR-213ENST00000544454 PARP10Q53GL7 1025 aa17.59■□□□□ 0.41
LTBR-213ENST00000544454 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
LTBR-213ENST00000544454 GOLGB1Q14789 3259 aaKnown RBP17.58■□□□□ 0.41
LTBR-213ENST00000544454 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
LTBR-213ENST00000544454 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
LTBR-213ENST00000544454 NPHP1O15259 732 aa17.58■□□□□ 0.4
LTBR-213ENST00000544454 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
LTBR-213ENST00000544454 GPTP24298 496 aa17.58■□□□□ 0.4
LTBR-213ENST00000544454 ST5P78524 1137 aa17.58■□□□□ 0.4
LTBR-213ENST00000544454 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
LTBR-213ENST00000544454 BCORQ6W2J9 1755 aa17.58■□□□□ 0.4
LTBR-213ENST00000544454 DPEP1P16444 411 aa17.57■□□□□ 0.4
LTBR-213ENST00000544454 PDE6BP35913 854 aa17.57■□□□□ 0.4
LTBR-213ENST00000544454 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
LTBR-213ENST00000544454 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
LTBR-213ENST00000544454 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
LTBR-213ENST00000544454 KCNA3P22001 575 aa17.56■□□□□ 0.4
LTBR-213ENST00000544454 GTF2E1P29083 439 aaPredicted RBP17.56■□□□□ 0.4
LTBR-213ENST00000544454 TRIM28Q13263 835 aaKnown RBP17.56■□□□□ 0.4
LTBR-213ENST00000544454 GPR162Q16538 588 aa17.56■□□□□ 0.4
LTBR-213ENST00000544454 SUSD4Q5VX71 490 aa17.56■□□□□ 0.4
LTBR-213ENST00000544454 ZNF428Q96B54 188 aa17.56■□□□□ 0.4
LTBR-213ENST00000544454 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
LTBR-213ENST00000544454 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
LTBR-213ENST00000544454 KSR2Q6VAB6 950 aa17.55■□□□□ 0.4
LTBR-213ENST00000544454 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
LTBR-213ENST00000544454 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
LTBR-213ENST00000544454 ISCA1Q9BUE6 129 aa17.55■□□□□ 0.4
LTBR-213ENST00000544454 UTRNP46939 3433 aa17.55■□□□□ 0.4
LTBR-213ENST00000544454 NRXN2Q9P2S2 1712 aa17.55■□□□□ 0.4
LTBR-213ENST00000544454 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
LTBR-213ENST00000544454 H0YIN7 160 aa17.54■□□□□ 0.4
LTBR-213ENST00000544454 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
LTBR-213ENST00000544454 FLIIQ13045 1269 aa17.54■□□□□ 0.4
LTBR-213ENST00000544454 G2E3Q7L622 706 aa17.54■□□□□ 0.4
LTBR-213ENST00000544454 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
LTBR-213ENST00000544454 PIM2Q9P1W9 311 aa17.54■□□□□ 0.4
LTBR-213ENST00000544454 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
LTBR-213ENST00000544454 PI4KAP2A4QPH2 592 aa17.53■□□□□ 0.4
LTBR-213ENST00000544454 GRIN3BO60391 1043 aa17.53■□□□□ 0.4
LTBR-213ENST00000544454 NTSR2O95665 410 aa17.53■□□□□ 0.4
LTBR-213ENST00000544454 CHRNA5P30532 468 aa17.53■□□□□ 0.4
LTBR-213ENST00000544454 C2CD5Q86YS7 1000 aa17.53■□□□□ 0.4
LTBR-213ENST00000544454 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
LTBR-213ENST00000544454 PI4KAP1Q8N8J0 262 aa17.53■□□□□ 0.4
LTBR-213ENST00000544454 METTL22Q9BUU2 404 aaPredicted RBP17.53■□□□□ 0.4
LTBR-213ENST00000544454 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
LTBR-213ENST00000544454 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.4
LTBR-213ENST00000544454 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
LTBR-213ENST00000544454 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
LTBR-213ENST00000544454 MAP3K2Q9Y2U5 619 aa17.52■□□□□ 0.4
LTBR-213ENST00000544454 ATP5J2-PTCD1G3V325 749 aa17.51■□□□□ 0.39
LTBR-213ENST00000544454 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.396e-11■■□□□ 12.3
LTBR-213ENST00000544454 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
LTBR-213ENST00000544454 DALRD3Q5D0E6 543 aaKnown RBP17.51■□□□□ 0.39
LTBR-213ENST00000544454 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms