RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 TAF7Q15545 349 aaPredicted RBP26.08■■□□□ 1.77
CACNA1C-230ENST00000543114 PLEKHF1Q96S99 279 aa26.08■■□□□ 1.77
CACNA1C-230ENST00000543114 RRAGCQ9HB90 399 aa26.08■■□□□ 1.77
CACNA1C-230ENST00000543114 MIS18AQ9NYP9 233 aa26.08■■□□□ 1.77
CACNA1C-230ENST00000543114 PDZRN3Q9UPQ7 1066 aa26.08■■□□□ 1.77
CACNA1C-230ENST00000543114 NPHP1O15259 732 aa26.07■■□□□ 1.76
CACNA1C-230ENST00000543114 ST5P78524 1137 aa26.07■■□□□ 1.76
CACNA1C-230ENST00000543114 ZNF219Q9P2Y4 722 aaPredicted RBP26.06■■□□□ 1.76
CACNA1C-230ENST00000543114 C21orf2O43822 256 aa26.05■■□□□ 1.76
CACNA1C-230ENST00000543114 CLEC4GQ6UXB4 293 aa26.05■■□□□ 1.76
CACNA1C-230ENST00000543114 ZNF652Q9Y2D9 606 aa26.05■■□□□ 1.76
CACNA1C-230ENST00000543114 NEFMP07197 916 aa26.04■■□□□ 1.76
CACNA1C-230ENST00000543114 GLTPD2A6NH11 291 aa26.03■■□□□ 1.76
CACNA1C-230ENST00000543114 SRGNP10124 158 aa26.03■■□□□ 1.76
CACNA1C-230ENST00000543114 NBPF5PQ86XG9 351 aaPredicted RBP26.03■■□□□ 1.76
CACNA1C-230ENST00000543114 THUMPD2Q9BTF0 503 aaKnown RBP26.03■■□□□ 1.76
CACNA1C-230ENST00000543114 NFE2L2Q16236 605 aa26.02■■□□□ 1.76
CACNA1C-230ENST00000543114 STYK1Q6J9G0 422 aa26.02■■□□□ 1.76
CACNA1C-230ENST00000543114 PRPF40BQ6NWY9 871 aaKnown RBP26.02■■□□□ 1.76
CACNA1C-230ENST00000543114 FSTL1Q12841 308 aa26.01■■□□□ 1.75
CACNA1C-230ENST00000543114 NUP98P52948 1817 aa26■■□□□ 1.75
CACNA1C-230ENST00000543114 CNKSR1Q969H4 720 aa26■■□□□ 1.75
CACNA1C-230ENST00000543114 MASTLQ96GX5 879 aa26■■□□□ 1.75
CACNA1C-230ENST00000543114 NIP7Q9Y221 180 aaKnown RBP eCLIP26■■□□□ 1.75
CACNA1C-230ENST00000543114 LTBP3Q9NS15 1303 aa25.99■■□□□ 1.75
CACNA1C-230ENST00000543114 RGL2O15211 777 aa25.99■■□□□ 1.75
CACNA1C-230ENST00000543114 DNAJC5GQ8N7S2 189 aa25.99■■□□□ 1.75
CACNA1C-230ENST00000543114 PNISRQ8TF01 805 aaKnown RBP25.99■■□□□ 1.75
CACNA1C-230ENST00000543114 MAPK8IP3Q9UPT6 1336 aa25.98■■□□□ 1.75
CACNA1C-230ENST00000543114 HTRA3P83110 453 aa25.98■■□□□ 1.75
CACNA1C-230ENST00000543114 HLFQ16534 295 aa25.98■■□□□ 1.75
CACNA1C-230ENST00000543114 TAOK3Q9H2K8 898 aa25.98■■□□□ 1.75
CACNA1C-230ENST00000543114 EIF4A1P60842 406 aaKnown RBP25.97■■□□□ 1.75
CACNA1C-230ENST00000543114 FAM177BA6PVY3 158 aa25.95■■□□□ 1.74
CACNA1C-230ENST00000543114 VEGFAP15692 232 aaPredicted RBP25.95■■□□□ 1.74
CACNA1C-230ENST00000543114 ERFEQ4G0M1 354 aa25.95■■□□□ 1.74
CACNA1C-230ENST00000543114 SMC1BQ8NDV3 1235 aa25.95■■□□□ 1.74
CACNA1C-230ENST00000543114 KLRG2A4D1S0 409 aaPredicted RBP25.94■■□□□ 1.74
CACNA1C-230ENST00000543114 TPTE2Q6XPS3 522 aa25.94■■□□□ 1.74
CACNA1C-230ENST00000543114 NGEFQ8N5V2 710 aa25.94■■□□□ 1.74
CACNA1C-230ENST00000543114 ABCC12Q96J65 1359 aa25.94■■□□□ 1.74
CACNA1C-230ENST00000543114 POTECB2RU33 542 aa25.93■■□□□ 1.74
CACNA1C-230ENST00000543114 NPR1P16066 1061 aa25.93■■□□□ 1.74
CACNA1C-230ENST00000543114 SOGA3Q5TF21 947 aa25.93■■□□□ 1.74
CACNA1C-230ENST00000543114 C7orf43Q8WVR3 580 aa25.93■■□□□ 1.74
CACNA1C-230ENST00000543114 PNNQ9H307 717 aaKnown RBP25.93■■□□□ 1.74
CACNA1C-230ENST00000543114 MAP3K15Q6ZN16 1313 aa25.91■■□□□ 1.74
CACNA1C-230ENST00000543114 TTLL7Q6ZT98 887 aa25.91■■□□□ 1.74
CACNA1C-230ENST00000543114 RRP7AQ9Y3A4 280 aaKnown RBP25.91■■□□□ 1.74
CACNA1C-230ENST00000543114 MYL6BP14649 208 aa25.9■■□□□ 1.74
CACNA1C-230ENST00000543114 RALBP1Q15311 655 aa25.9■■□□□ 1.74
CACNA1C-230ENST00000543114 CCDC93Q567U6 631 aa25.9■■□□□ 1.74
CACNA1C-230ENST00000543114 DPY19L2Q6NUT2 758 aa25.9■■□□□ 1.74
CACNA1C-230ENST00000543114 ERVV-1B6SEH8 477 aa25.89■■□□□ 1.74
CACNA1C-230ENST00000543114 OLFM4Q6UX06 510 aa25.89■■□□□ 1.74
CACNA1C-230ENST00000543114 KIF6Q6ZMV9 814 aa25.88■■□□□ 1.73
CACNA1C-230ENST00000543114 KLRG1Q96E93 195 aa25.88■■□□□ 1.73
CACNA1C-230ENST00000543114 TSPYL4Q9UJ04 414 aa25.88■■□□□ 1.73
CACNA1C-230ENST00000543114 PCNTO95613 3336 aa25.88■■□□□ 1.73
CACNA1C-230ENST00000543114 UBN2Q6ZU65 1347 aa25.88■■□□□ 1.73
CACNA1C-230ENST00000543114 IFFO2Q5TF58 517 aa25.87■■□□□ 1.73
CACNA1C-230ENST00000543114 NUTM1Q86Y26 1132 aa25.87■■□□□ 1.73
CACNA1C-230ENST00000543114 ZBTB3Q9H5J0 574 aa25.87■■□□□ 1.73
CACNA1C-230ENST00000543114 IBTKQ9P2D0 1353 aaPredicted RBP25.86■■□□□ 1.73
CACNA1C-230ENST00000543114 GTF2E1P29083 439 aaPredicted RBP25.86■■□□□ 1.73
CACNA1C-230ENST00000543114 RIPK4P57078 832 aa25.86■■□□□ 1.73
CACNA1C-230ENST00000543114 RIC1Q4ADV7 1423 aa25.86■■□□□ 1.73
CACNA1C-230ENST00000543114 ERBB4Q15303 1308 aa25.86■■□□□ 1.73
CACNA1C-230ENST00000543114 DDNO94850 711 aaPredicted RBP25.85■■□□□ 1.73
CACNA1C-230ENST00000543114 GPTP24298 496 aa25.85■■□□□ 1.73
CACNA1C-230ENST00000543114 CRY2Q49AN0 593 aa25.85■■□□□ 1.73
CACNA1C-230ENST00000543114 NYXQ9GZU5 481 aa25.85■■□□□ 1.73
CACNA1C-230ENST00000543114 SNED1Q8TER0 1413 aa25.85■■□□□ 1.73
CACNA1C-230ENST00000543114 FKBP4Q02790 459 aaKnown RBP eCLIP25.84■■□□□ 1.73
CACNA1C-230ENST00000543114 MYBBP1AQ9BQG0 1328 aaKnown RBP25.84■■□□□ 1.73
CACNA1C-230ENST00000543114 TMPOP42166 694 aaKnown RBP25.83■■□□□ 1.73
CACNA1C-230ENST00000543114 DDX10Q13206 875 aaKnown RBP25.83■■□□□ 1.73
CACNA1C-230ENST00000543114 LRP10Q7Z4F1 713 aa25.83■■□□□ 1.73
CACNA1C-230ENST00000543114 ZNF277Q9NRM2 450 aaPredicted RBP25.83■■□□□ 1.73
CACNA1C-230ENST00000543114 SCN4AP35499 1836 aa25.83■■□□□ 1.73
CACNA1C-230ENST00000543114 ANKRD36CQ5JPF3 1778 aa25.82■■□□□ 1.72
CACNA1C-230ENST00000543114 JMYQ8N9B5 988 aa25.82■■□□□ 1.72
CACNA1C-230ENST00000543114 ALDH1B1P30837 517 aa25.81■■□□□ 1.72
CACNA1C-230ENST00000543114 POTEIP0CG38 1075 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 POTEJP0CG39 1038 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 LMOD3Q0VAK6 560 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 PDIA6Q15084 440 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 PROSER3Q2NL68 480 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 SUSD4Q5VX71 490 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 GIGYF2Q6Y7W6 1299 aaKnown RBP25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 CCDC146Q8IYE0 955 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 ZNF34Q8IZ26 560 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 ZNF541Q9H0D2 1346 aa25.8■■□□□ 1.72
CACNA1C-230ENST00000543114 NTSR2O95665 410 aa25.79■■□□□ 1.72
CACNA1C-230ENST00000543114 EIF2S2P20042 333 aaKnown RBP25.79■■□□□ 1.72
CACNA1C-230ENST00000543114 RTKN2Q8IZC4 609 aa25.79■■□□□ 1.72
CACNA1C-230ENST00000543114 ANXA1P04083 346 aa25.78■■□□□ 1.72
CACNA1C-230ENST00000543114 L3MBTL3Q96JM7 780 aaPredicted RBP25.78■■□□□ 1.72
CACNA1C-230ENST00000543114 BABAM1Q9NWV8 329 aa25.78■■□□□ 1.72
CACNA1C-230ENST00000543114 COL4A5P29400 1685 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms