RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PNNQ9H307 717 aaKnown RBP10.03□□□□□ -0.8
AC005840.3-201ENST00000541888 NEFLP07196 543 aa10.03□□□□□ -0.8
AC005840.3-201ENST00000541888 CCDC27Q2M243 656 aa10.03□□□□□ -0.8
AC005840.3-201ENST00000541888 BTG4Q9NY30 223 aa10.03□□□□□ -0.8
AC005840.3-201ENST00000541888 TNNQ9UQP3 1299 aa10.03□□□□□ -0.8
AC005840.3-201ENST00000541888 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 TOM1L2Q6ZVM7 507 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 WDR63Q8IWG1 891 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 TSPYL6Q8N831 410 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 LGR6Q9HBX8 967 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 CPDO75976 1380 aa10.02□□□□□ -0.81
AC005840.3-201ENST00000541888 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
AC005840.3-201ENST00000541888 EP400Q96L91 3159 aa10.01□□□□□ -0.81
AC005840.3-201ENST00000541888 RRP1P56182 461 aaKnown RBP10.01□□□□□ -0.81
AC005840.3-201ENST00000541888 SMYD5Q6GMV2 418 aa10.01□□□□□ -0.81
AC005840.3-201ENST00000541888 MPRIPQ6WCQ1 1025 aa10.01□□□□□ -0.81
AC005840.3-201ENST00000541888 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
AC005840.3-201ENST00000541888 ZNF530Q6P9A1 599 aaPredicted RBP10□□□□□ -0.81
AC005840.3-201ENST00000541888 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
AC005840.3-201ENST00000541888 COL22A1Q8NFW1 1626 aaPredicted RBP10□□□□□ -0.81
AC005840.3-201ENST00000541888 KAT6BQ8WYB5 2073 aa10□□□□□ -0.81
AC005840.3-201ENST00000541888 EVA1CP58658 441 aa10□□□□□ -0.81
AC005840.3-201ENST00000541888 IL17REQ8NFR9 667 aa10□□□□□ -0.81
AC005840.3-201ENST00000541888 FRAT1Q92837 279 aaPredicted RBP10□□□□□ -0.81
AC005840.3-201ENST00000541888 LRCH3Q96II8 777 aa9.99□□□□□ -0.81
AC005840.3-201ENST00000541888 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
AC005840.3-201ENST00000541888 MAP3K5Q99683 1374 aa9.99□□□□□ -0.81
AC005840.3-201ENST00000541888 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 HSPA1LP34931 641 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 C8orf58Q8NAV2 365 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 RAPGEF4Q8WZA2 1011 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 WBP1LQ9NX94 342 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 WDR17Q8IZU2 1322 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 LRRC37A3O60309 1634 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 CRB1P82279 1406 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 NCAPD2Q15021 1401 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 SAMD7Q7Z3H4 446 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 GAS2L2Q8NHY3 880 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 NECTIN2Q92692 538 aa9.98□□□□□ -0.81
AC005840.3-201ENST00000541888 SHANK3Q9BYB0 1731 aa9.97□□□□□ -0.81
AC005840.3-201ENST00000541888 RNF123Q5XPI4 1314 aa9.97□□□□□ -0.81
AC005840.3-201ENST00000541888 NGEFQ8N5V2 710 aa9.97□□□□□ -0.81
AC005840.3-201ENST00000541888 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
AC005840.3-201ENST00000541888 C8orf37Q96NL8 207 aa9.97□□□□□ -0.81
AC005840.3-201ENST00000541888 KCNQ3O43525 872 aa9.96□□□□□ -0.81
AC005840.3-201ENST00000541888 ZNF853P0CG23 659 aa9.96□□□□□ -0.81
AC005840.3-201ENST00000541888 RARSP54136 660 aaKnown RBP9.96□□□□□ -0.81
AC005840.3-201ENST00000541888 B4GALNT3Q6L9W6 998 aa9.96□□□□□ -0.81
AC005840.3-201ENST00000541888 LRP6O75581 1613 aa9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 TATP17735 454 aaPredicted RBP9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 LMOD3Q0VAK6 560 aa9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 DDX54Q8TDD1 881 aaKnown RBP9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 SSH1Q8WYL5 1049 aa9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 IFT57Q9NWB7 429 aa9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 TSPYL4Q9UJ04 414 aa9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 HPS5Q9UPZ3 1129 aa9.96□□□□□ -0.82
AC005840.3-201ENST00000541888 PKD1L3Q7Z443 1732 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 NRAPQ86VF7 1730 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 PARP4Q9UKK3 1724 aaKnown RBP9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 CYP27B1O15528 508 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 GNAI1P63096 354 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 PLEKHO1Q53GL0 409 aaPredicted RBP9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 PANK1Q8TE04 598 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 SMC4Q9NTJ3 1288 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 SCN11AQ9UI33 1791 aa9.95□□□□□ -0.82
AC005840.3-201ENST00000541888 IL16Q14005 1332 aa9.94□□□□□ -0.82
AC005840.3-201ENST00000541888 CANXP27824 592 aaKnown RBP9.94□□□□□ -0.82
AC005840.3-201ENST00000541888 CCDC9Q9Y3X0 531 aaKnown RBP9.94□□□□□ -0.82
AC005840.3-201ENST00000541888 KDM6AO15550 1401 aaPredicted RBP9.94□□□□□ -0.82
AC005840.3-201ENST00000541888 ABCC6O95255 1503 aa9.94□□□□□ -0.82
AC005840.3-201ENST00000541888 CHL1O00533 1208 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 RLBP1P12271 317 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 SLC39A6Q13433 755 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 TWISTNBQ3B726 338 aaPredicted RBP9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 SIPA1L3O60292 1781 aaPredicted RBP9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 PRAMEF22A3QJZ6 481 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 RNMTO43148 476 aaKnown RBP9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 VAMP4O75379 141 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 PHKG2P15735 406 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 PPP4CP60510 307 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 AKAP4Q5JQC9 854 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 OVOS2A0A0G2JMS6 1433 aa9.93□□□□□ -0.82
AC005840.3-201ENST00000541888 WNK3Q9BYP7 1800 aa9.92□□□□□ -0.82
AC005840.3-201ENST00000541888 KDM3BQ7LBC6 1761 aa9.92□□□□□ -0.82
AC005840.3-201ENST00000541888 IL2RBP14784 551 aa9.92□□□□□ -0.82
AC005840.3-201ENST00000541888 FAM161AQ3B820 660 aa9.92□□□□□ -0.82
AC005840.3-201ENST00000541888 TOGARAM1Q9Y4F4 1720 aa9.92□□□□□ -0.82
AC005840.3-201ENST00000541888 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
AC005840.3-201ENST00000541888 CALD1Q05682 793 aaKnown RBP9.91□□□□□ -0.82
AC005840.3-201ENST00000541888 TEFQ10587 303 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms