RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CLEC4GQ6UXB4 293 aa19.89■□□□□ 0.77
DDB1-218ENST00000540784 YTHDC1Q96MU7 727 aaKnown RBP19.89■□□□□ 0.77
DDB1-218ENST00000540784 ZNF652Q9Y2D9 606 aa19.89■□□□□ 0.77
DDB1-218ENST00000540784 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
DDB1-218ENST00000540784 RGL2O15211 777 aa19.88■□□□□ 0.77
DDB1-218ENST00000540784 CT47B1P0C2W7 299 aaPredicted RBP19.88■□□□□ 0.77
DDB1-218ENST00000540784 TM4SF1P30408 202 aa19.88■□□□□ 0.77
DDB1-218ENST00000540784 ZBTB3Q9H5J0 574 aa19.88■□□□□ 0.77
DDB1-218ENST00000540784 PHAXQ9H814 394 aaKnown RBP19.88■□□□□ 0.77
DDB1-218ENST00000540784 MMP10P09238 476 aa19.87■□□□□ 0.77
DDB1-218ENST00000540784 HLFQ16534 295 aa19.87■□□□□ 0.77
DDB1-218ENST00000540784 ANKRD13DQ6ZTN6 518 aa19.87■□□□□ 0.77
DDB1-218ENST00000540784 ZNF428Q96B54 188 aa19.87■□□□□ 0.77
DDB1-218ENST00000540784 SGIP1Q9BQI5 828 aa19.87■□□□□ 0.77
DDB1-218ENST00000540784 PARP3Q9Y6F1 533 aa19.87■□□□□ 0.77
DDB1-218ENST00000540784 BICDL1Q6ZP65 573 aa19.86■□□□□ 0.77
DDB1-218ENST00000540784 SETDB2Q96T68 719 aa19.86■□□□□ 0.77
DDB1-218ENST00000540784 PPP1R1BQ9UD71 204 aaPredicted RBP19.86■□□□□ 0.77
DDB1-218ENST00000540784 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
DDB1-218ENST00000540784 NFIXQ14938 502 aa19.85■□□□□ 0.77
DDB1-218ENST00000540784 TBC1D9BQ66K14 1250 aa19.85■□□□□ 0.77
DDB1-218ENST00000540784 PLBD2Q8NHP8 589 aa19.85■□□□□ 0.77
DDB1-218ENST00000540784 GIGYF2Q6Y7W6 1299 aaKnown RBP19.84■□□□□ 0.77
DDB1-218ENST00000540784 G2E3Q7L622 706 aa19.84■□□□□ 0.77
DDB1-218ENST00000540784 RIC3Q7Z5B4 369 aa19.84■□□□□ 0.77
DDB1-218ENST00000540784 ALDH1L2Q3SY69 923 aa19.82■□□□□ 0.76
DDB1-218ENST00000540784 HSP90AB3PQ58FF7 597 aa19.82■□□□□ 0.76
DDB1-218ENST00000540784 SSH1Q8WYL5 1049 aa19.82■□□□□ 0.76
DDB1-218ENST00000540784 NIP7Q9Y221 180 aaKnown RBP eCLIP19.82■□□□□ 0.76
DDB1-218ENST00000540784 C4AP0C0L4 1744 aa19.82■□□□□ 0.76
DDB1-218ENST00000540784 POLRMTO00411 1230 aaKnown RBP19.81■□□□□ 0.76
DDB1-218ENST00000540784 SERPINB2P05120 415 aa19.81■□□□□ 0.76
DDB1-218ENST00000540784 DDR1Q08345 913 aa19.81■□□□□ 0.76
DDB1-218ENST00000540784 FLIIQ13045 1269 aa19.81■□□□□ 0.76
DDB1-218ENST00000540784 TCIRG1Q13488 830 aa19.81■□□□□ 0.76
DDB1-218ENST00000540784 MRPL50Q8N5N7 158 aaKnown RBP19.81■□□□□ 0.76
DDB1-218ENST00000540784 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
DDB1-218ENST00000540784 PI4KAP2A4QPH2 592 aa19.79■□□□□ 0.76
DDB1-218ENST00000540784 GPTP24298 496 aa19.79■□□□□ 0.76
DDB1-218ENST00000540784 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
DDB1-218ENST00000540784 ZNF34Q8IZ26 560 aa19.79■□□□□ 0.76
DDB1-218ENST00000540784 PI4KAP1Q8N8J0 262 aa19.79■□□□□ 0.76
DDB1-218ENST00000540784 SMC4Q9NTJ3 1288 aa19.79■□□□□ 0.76
DDB1-218ENST00000540784 RARSP54136 660 aaKnown RBP19.78■□□□□ 0.76
DDB1-218ENST00000540784 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
DDB1-218ENST00000540784 KLHL34Q8N239 644 aa19.78■□□□□ 0.76
DDB1-218ENST00000540784 BCL2L13Q9BXK5 485 aa19.78■□□□□ 0.76
DDB1-218ENST00000540784 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
DDB1-218ENST00000540784 FAM177BA6PVY3 158 aa19.77■□□□□ 0.76
DDB1-218ENST00000540784 NPHP1O15259 732 aa19.77■□□□□ 0.76
DDB1-218ENST00000540784 NBPF5PQ86XG9 351 aaPredicted RBP19.77■□□□□ 0.76
DDB1-218ENST00000540784 CARMIL3Q8ND23 1372 aa19.76■□□□□ 0.75
DDB1-218ENST00000540784 PARP10Q53GL7 1025 aa19.76■□□□□ 0.75
DDB1-218ENST00000540784 METTL22Q9BUU2 404 aaPredicted RBP19.76■□□□□ 0.75
DDB1-218ENST00000540784 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
DDB1-218ENST00000540784 GTF2E1P29083 439 aaPredicted RBP19.75■□□□□ 0.75
DDB1-218ENST00000540784 SUSD4Q5VX71 490 aa19.75■□□□□ 0.75
DDB1-218ENST00000540784 PPP1R42Q7Z4L9 355 aa19.75■□□□□ 0.75
DDB1-218ENST00000540784 MYD88Q99836 296 aa19.75■□□□□ 0.75
DDB1-218ENST00000540784 FHDC1Q9C0D6 1143 aaPredicted RBP19.75■□□□□ 0.75
DDB1-218ENST00000540784 NYXQ9GZU5 481 aa19.75■□□□□ 0.75
DDB1-218ENST00000540784 CD2APQ9Y5K6 639 aa19.75■□□□□ 0.75
DDB1-218ENST00000540784 ATP10DQ9P241 1426 aa19.75■□□□□ 0.75
DDB1-218ENST00000540784 COL24A1Q17RW2 1714 aa19.74■□□□□ 0.75
DDB1-218ENST00000540784 NEXNQ0ZGT2 675 aa19.74■□□□□ 0.75
DDB1-218ENST00000540784 TRIM28Q13263 835 aaKnown RBP19.74■□□□□ 0.75
DDB1-218ENST00000540784 NLRP10Q86W26 655 aa19.74■□□□□ 0.75
DDB1-218ENST00000540784 CNBD1Q8NA66 436 aa19.74■□□□□ 0.75
DDB1-218ENST00000540784 ISCA1Q9BUE6 129 aa19.74■□□□□ 0.75
DDB1-218ENST00000540784 SCN7AQ01118 1682 aa19.73■□□□□ 0.75
DDB1-218ENST00000540784 BRPF1P55201 1214 aaPredicted RBP19.73■□□□□ 0.75
DDB1-218ENST00000540784 DNAAF4Q8WXU2 420 aa19.73■□□□□ 0.75
DDB1-218ENST00000540784 SYT17Q9BSW7 474 aa19.73■□□□□ 0.75
DDB1-218ENST00000540784 UTP14AQ9BVJ6 771 aaKnown RBP19.73■□□□□ 0.75
DDB1-218ENST00000540784 NOB1Q9ULX3 412 aaKnown RBP19.73■□□□□ 0.75
DDB1-218ENST00000540784 PTPRCP08575 1304 aa19.73■□□□□ 0.75
DDB1-218ENST00000540784 UBN2Q6ZU65 1347 aa19.73■□□□□ 0.75
DDB1-218ENST00000540784 ADCY9O60503 1353 aa19.72■□□□□ 0.75
DDB1-218ENST00000540784 F6X3S4 739 aa19.72■□□□□ 0.75
DDB1-218ENST00000540784 BCAR3O75815 825 aa19.72■□□□□ 0.75
DDB1-218ENST00000540784 ST5P78524 1137 aa19.72■□□□□ 0.75
DDB1-218ENST00000540784 PRR5LQ6MZQ0 368 aa19.72■□□□□ 0.75
DDB1-218ENST00000540784 LRP5O75197 1615 aa19.72■□□□□ 0.75
DDB1-218ENST00000540784 BCORQ6W2J9 1755 aa19.71■□□□□ 0.75
DDB1-218ENST00000540784 CCDC24Q8N4L8 307 aa19.71■□□□□ 0.75
DDB1-218ENST00000540784 CCDC191Q8NCU4 936 aa19.71■□□□□ 0.75
DDB1-218ENST00000540784 TRMT112Q9UI30 125 aaKnown RBP19.71■□□□□ 0.75
DDB1-218ENST00000540784 IPO8O15397 1037 aaKnown RBP19.7■□□□□ 0.74
DDB1-218ENST00000540784 TGFB2P61812 414 aa19.7■□□□□ 0.74
DDB1-218ENST00000540784 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
DDB1-218ENST00000540784 BRIP1Q9BX63 1249 aa19.7■□□□□ 0.74
DDB1-218ENST00000540784 CACNA1FO60840 1977 aa19.7■□□□□ 0.74
DDB1-218ENST00000540784 NUP98P52948 1817 aa19.69■□□□□ 0.74
DDB1-218ENST00000540784 ERFEQ4G0M1 354 aa19.69■□□□□ 0.74
DDB1-218ENST00000540784 NUTM1Q86Y26 1132 aa19.69■□□□□ 0.74
DDB1-218ENST00000540784 CWC25Q9NXE8 425 aaPredicted RBP19.69■□□□□ 0.74
DDB1-218ENST00000540784 NTSR2O95665 410 aa19.68■□□□□ 0.74
DDB1-218ENST00000540784 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
DDB1-218ENST00000540784 PDE6BP35913 854 aa19.68■□□□□ 0.74
DDB1-218ENST00000540784 LINS1Q8NG48 757 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms