RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 IL6STP40189 918 aaPredicted RBP17.62■□□□□ 0.41
UBC-207ENST00000540351 CNKSR1Q969H4 720 aa17.62■□□□□ 0.41
UBC-207ENST00000540351 IQCA1LA6NCM1 817 aa17.61■□□□□ 0.41
UBC-207ENST00000540351 IL17REQ8NFR9 667 aa17.61■□□□□ 0.41
UBC-207ENST00000540351 ABHD8Q96I13 439 aa17.61■□□□□ 0.41
UBC-207ENST00000540351 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
UBC-207ENST00000540351 MASTLQ96GX5 879 aa17.6■□□□□ 0.41
UBC-207ENST00000540351 COL3A1P02461 1466 aaPredicted RBP17.59■□□□□ 0.41
UBC-207ENST00000540351 A1BGP04217 495 aa17.59■□□□□ 0.41
UBC-207ENST00000540351 RGS19P49795 217 aa17.59■□□□□ 0.41
UBC-207ENST00000540351 OLFM4Q6UX06 510 aa17.59■□□□□ 0.41
UBC-207ENST00000540351 CNBD1Q8NA66 436 aa17.59■□□□□ 0.41
UBC-207ENST00000540351 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
UBC-207ENST00000540351 LTBP1Q14766 1721 aa17.58■□□□□ 0.41
UBC-207ENST00000540351 COL4A5P29400 1685 aa17.58■□□□□ 0.41
UBC-207ENST00000540351 CEMIPQ8WUJ3 1361 aa17.58■□□□□ 0.4
UBC-207ENST00000540351 FZD9O00144 591 aa17.58■□□□□ 0.4
UBC-207ENST00000540351 TNRC18O15417 2968 aaPredicted RBP17.58■□□□□ 0.4
UBC-207ENST00000540351 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.4
UBC-207ENST00000540351 SOGA3Q5TF21 947 aa17.58■□□□□ 0.4
UBC-207ENST00000540351 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
UBC-207ENST00000540351 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
UBC-207ENST00000540351 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
UBC-207ENST00000540351 KCNQ3O43525 872 aa17.56■□□□□ 0.4
UBC-207ENST00000540351 EPHX2P34913 555 aa17.56■□□□□ 0.4
UBC-207ENST00000540351 AIDAQ96BJ3 306 aa17.56■□□□□ 0.4
UBC-207ENST00000540351 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
UBC-207ENST00000540351 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
UBC-207ENST00000540351 HACL1Q9UJ83 578 aa17.56■□□□□ 0.4
UBC-207ENST00000540351 WDR33Q9C0J8 1336 aaKnown RBP17.55■□□□□ 0.4
UBC-207ENST00000540351 DEFB115Q30KQ5 88 aa17.55■□□□□ 0.4
UBC-207ENST00000540351 CCDC93Q567U6 631 aa17.55■□□□□ 0.4
UBC-207ENST00000540351 CNTROBQ8N137 903 aa17.55■□□□□ 0.4
UBC-207ENST00000540351 MAP1SQ66K74 1059 aaPredicted RBP17.54■□□□□ 0.4
UBC-207ENST00000540351 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
UBC-207ENST00000540351 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
UBC-207ENST00000540351 NPR1P16066 1061 aa17.53■□□□□ 0.4
UBC-207ENST00000540351 ST5P78524 1137 aa17.53■□□□□ 0.4
UBC-207ENST00000540351 FMR1Q06787 632 aaKnown RBP eCLIP17.53■□□□□ 0.46e-26■■□□□ 11.8
UBC-207ENST00000540351 CLEC4GQ6UXB4 293 aa17.53■□□□□ 0.4
UBC-207ENST00000540351 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
UBC-207ENST00000540351 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
UBC-207ENST00000540351 EIF4G2P78344 907 aaKnown RBP eCLIP17.52■□□□□ 0.4
UBC-207ENST00000540351 EAPPQ56P03 285 aaPredicted RBP17.52■□□□□ 0.4
UBC-207ENST00000540351 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
UBC-207ENST00000540351 KNSTRNQ9Y448 316 aa17.52■□□□□ 0.4
UBC-207ENST00000540351 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
UBC-207ENST00000540351 RGL2O15211 777 aa17.51■□□□□ 0.39
UBC-207ENST00000540351 MAP2K1Q02750 393 aaPredicted RBP17.51■□□□□ 0.39
UBC-207ENST00000540351 PNMA8AQ86V59 439 aaPredicted RBP17.51■□□□□ 0.39
UBC-207ENST00000540351 DDX21Q9NR30 783 aaKnown RBP eCLIP17.51■□□□□ 0.39
UBC-207ENST00000540351 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
UBC-207ENST00000540351 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
UBC-207ENST00000540351 DIAPH1O60610 1272 aaKnown RBP17.5■□□□□ 0.39
UBC-207ENST00000540351 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
UBC-207ENST00000540351 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
UBC-207ENST00000540351 CST9Q5W186 159 aa17.5■□□□□ 0.39
UBC-207ENST00000540351 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
UBC-207ENST00000540351 GPC2Q8N158 579 aa17.5■□□□□ 0.39
UBC-207ENST00000540351 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
UBC-207ENST00000540351 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
UBC-207ENST00000540351 ZNF330Q9Y3S2 320 aaPredicted RBP17.5■□□□□ 0.39
UBC-207ENST00000540351 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
UBC-207ENST00000540351 RTKN2Q8IZC4 609 aa17.49■□□□□ 0.39
UBC-207ENST00000540351 PSMD1Q99460 953 aa17.49■□□□□ 0.39
UBC-207ENST00000540351 SCNN1DP51172 638 aa17.48■□□□□ 0.39
UBC-207ENST00000540351 TEFQ10587 303 aa17.48■□□□□ 0.39
UBC-207ENST00000540351 SLC51AQ86UW1 340 aa17.48■□□□□ 0.39
UBC-207ENST00000540351 NBPF5PQ86XG9 351 aaPredicted RBP17.48■□□□□ 0.39
UBC-207ENST00000540351 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
UBC-207ENST00000540351 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
UBC-207ENST00000540351 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
UBC-207ENST00000540351 PDE4DIPQ5VU43 2346 aa17.46■□□□□ 0.39
UBC-207ENST00000540351 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
UBC-207ENST00000540351 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
UBC-207ENST00000540351 CAPNS2Q96L46 248 aa17.46■□□□□ 0.39
UBC-207ENST00000540351 ABCC12Q96J65 1359 aa17.45■□□□□ 0.38
UBC-207ENST00000540351 EPS15P42566 896 aa17.45■□□□□ 0.38
UBC-207ENST00000540351 MLLT1Q03111 559 aaPredicted RBP17.45■□□□□ 0.38
UBC-207ENST00000540351 CYP4F22Q6NT55 531 aa17.45■□□□□ 0.38
UBC-207ENST00000540351 PCDH10Q9P2E7 1040 aa17.45■□□□□ 0.38
UBC-207ENST00000540351 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
UBC-207ENST00000540351 HLFQ16534 295 aa17.44■□□□□ 0.38
UBC-207ENST00000540351 TPTE2Q6XPS3 522 aa17.44■□□□□ 0.38
UBC-207ENST00000540351 ABT1Q9ULW3 272 aaKnown RBP17.44■□□□□ 0.38
UBC-207ENST00000540351 TLL2Q9Y6L7 1015 aa17.44■□□□□ 0.38
UBC-207ENST00000540351 TRAF5O00463 557 aa17.43■□□□□ 0.38
UBC-207ENST00000540351 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
UBC-207ENST00000540351 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
UBC-207ENST00000540351 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
UBC-207ENST00000540351 RIC1Q4ADV7 1423 aa17.42■□□□□ 0.38
UBC-207ENST00000540351 BTBD11A6QL63 1104 aa17.42■□□□□ 0.38
UBC-207ENST00000540351 ALDH1B1P30837 517 aa17.42■□□□□ 0.38
UBC-207ENST00000540351 HOXA10P31260 410 aaPredicted RBP17.42■□□□□ 0.38
UBC-207ENST00000540351 CASP8AP2Q9UKL3 1982 aa17.42■□□□□ 0.38
UBC-207ENST00000540351 CCDC85CA6NKD9 419 aa17.41■□□□□ 0.38
UBC-207ENST00000540351 NPHP1O15259 732 aa17.41■□□□□ 0.38
UBC-207ENST00000540351 AOC2O75106 756 aa17.41■□□□□ 0.38
UBC-207ENST00000540351 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
UBC-207ENST00000540351 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms