RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
KLHL42-203ENST00000540301 STYK1Q6J9G0 422 aa11.39□□□□□ -0.59
KLHL42-203ENST00000540301 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
KLHL42-203ENST00000540301 TESK2Q96S53 571 aa11.39□□□□□ -0.59
KLHL42-203ENST00000540301 KIF20BQ96Q89 1820 aa11.39□□□□□ -0.59
KLHL42-203ENST00000540301 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
KLHL42-203ENST00000540301 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
KLHL42-203ENST00000540301 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
KLHL42-203ENST00000540301 GCC1Q96CN9 775 aa11.38□□□□□ -0.59
KLHL42-203ENST00000540301 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
KLHL42-203ENST00000540301 ZBTB1Q9Y2K1 713 aa11.38□□□□□ -0.59
KLHL42-203ENST00000540301 TRAF5O00463 557 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 SRGNP10124 158 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 FKBP4Q02790 459 aaKnown RBP eCLIP11.37□□□□□ -0.59
KLHL42-203ENST00000540301 AMOTQ4VCS5 1084 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 CCDC93Q567U6 631 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 TBC1D9BQ66K14 1250 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 GPC2Q8N158 579 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 MASTLQ96GX5 879 aa11.37□□□□□ -0.59
KLHL42-203ENST00000540301 CACNA1SQ13698 1873 aa11.36□□□□□ -0.59
KLHL42-203ENST00000540301 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
KLHL42-203ENST00000540301 ANKRD26Q9UPS8 1709 aa11.36□□□□□ -0.59
KLHL42-203ENST00000540301 FZD9O00144 591 aa11.36□□□□□ -0.59
KLHL42-203ENST00000540301 EIF4A2Q14240 407 aaKnown RBP11.36□□□□□ -0.59
KLHL42-203ENST00000540301 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
KLHL42-203ENST00000540301 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
KLHL42-203ENST00000540301 SAPCD2Q86UD0 394 aa11.36□□□□□ -0.59
KLHL42-203ENST00000540301 NPHP1O15259 732 aa11.35□□□□□ -0.59
KLHL42-203ENST00000540301 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
KLHL42-203ENST00000540301 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
KLHL42-203ENST00000540301 C7orf43Q8WVR3 580 aa11.35□□□□□ -0.59
KLHL42-203ENST00000540301 A0A087WZG4 1122 aa11.34□□□□□ -0.59
KLHL42-203ENST00000540301 CANXP27824 592 aaKnown RBP11.34□□□□□ -0.59
KLHL42-203ENST00000540301 CNBD1Q8NA66 436 aa11.34□□□□□ -0.59
KLHL42-203ENST00000540301 HHIPL1Q96JK4 782 aa11.34□□□□□ -0.59
KLHL42-203ENST00000540301 POLKQ9UBT6 870 aa11.34□□□□□ -0.59
KLHL42-203ENST00000540301 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.59
KLHL42-203ENST00000540301 CELF2O95319 508 aaKnown RBP11.33□□□□□ -0.6
KLHL42-203ENST00000540301 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
KLHL42-203ENST00000540301 ST5P78524 1137 aa11.33□□□□□ -0.6
KLHL42-203ENST00000540301 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
KLHL42-203ENST00000540301 RTKN2Q8IZC4 609 aa11.33□□□□□ -0.6
KLHL42-203ENST00000540301 GJA3Q9Y6H8 435 aa11.33□□□□□ -0.6
KLHL42-203ENST00000540301 EPS15P42566 896 aa11.32□□□□□ -0.6
KLHL42-203ENST00000540301 EIF5P55010 431 aaKnown RBP11.32□□□□□ -0.6
KLHL42-203ENST00000540301 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
KLHL42-203ENST00000540301 SLC39A6Q13433 755 aa11.32□□□□□ -0.6
KLHL42-203ENST00000540301 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
KLHL42-203ENST00000540301 SYNE4Q8N205 404 aa11.32□□□□□ -0.6
KLHL42-203ENST00000540301 JDP2Q8WYK2 163 aa11.32□□□□□ -0.6
KLHL42-203ENST00000540301 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
KLHL42-203ENST00000540301 SCNN1DP51172 638 aa11.31□□□□□ -0.6
KLHL42-203ENST00000540301 NOGQ13253 232 aa11.31□□□□□ -0.6
KLHL42-203ENST00000540301 OLFM4Q6UX06 510 aa11.31□□□□□ -0.6
KLHL42-203ENST00000540301 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
KLHL42-203ENST00000540301 SETDB2Q96T68 719 aa11.31□□□□□ -0.6
KLHL42-203ENST00000540301 SLC52A2Q9HAB3 445 aa11.31□□□□□ -0.6
KLHL42-203ENST00000540301 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
KLHL42-203ENST00000540301 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
KLHL42-203ENST00000540301 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
KLHL42-203ENST00000540301 STARD3NLO95772 234 aa11.29□□□□□ -0.6
KLHL42-203ENST00000540301 NPR1P16066 1061 aa11.29□□□□□ -0.6
KLHL42-203ENST00000540301 ZNF408Q9H9D4 720 aa11.29□□□□□ -0.6
KLHL42-203ENST00000540301 SAGE1Q9NXZ1 904 aa11.29□□□□□ -0.6
KLHL42-203ENST00000540301 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
KLHL42-203ENST00000540301 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
KLHL42-203ENST00000540301 CTU1Q7Z7A3 348 aaKnown RBP11.28□□□□□ -0.6
KLHL42-203ENST00000540301 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
KLHL42-203ENST00000540301 TNNT2P45379 298 aaPredicted RBP11.27□□□□□ -0.61
KLHL42-203ENST00000540301 AKAP4Q5JQC9 854 aa11.27□□□□□ -0.61
KLHL42-203ENST00000540301 AEBP1Q8IUX7 1158 aa11.27□□□□□ -0.61
KLHL42-203ENST00000540301 GLIS2Q9BZE0 524 aaPredicted RBP11.27□□□□□ -0.61
KLHL42-203ENST00000540301 LGR6Q9HBX8 967 aa11.27□□□□□ -0.61
KLHL42-203ENST00000540301 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
KLHL42-203ENST00000540301 TRPA1O75762 1119 aa11.26□□□□□ -0.61
KLHL42-203ENST00000540301 PSMD1Q99460 953 aa11.26□□□□□ -0.61
KLHL42-203ENST00000540301 ADARB2Q9NS39 739 aaKnown RBP11.26□□□□□ -0.61
KLHL42-203ENST00000540301 RNF186Q9NXI6 227 aa11.26□□□□□ -0.61
KLHL42-203ENST00000540301 KLRG2A4D1S0 409 aaPredicted RBP11.25□□□□□ -0.61
KLHL42-203ENST00000540301 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
KLHL42-203ENST00000540301 ALDH1B1P30837 517 aa11.25□□□□□ -0.61
KLHL42-203ENST00000540301 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
KLHL42-203ENST00000540301 HUNKP57058 714 aa11.25□□□□□ -0.61
KLHL42-203ENST00000540301 CDCA8Q53HL2 280 aa11.25□□□□□ -0.61
KLHL42-203ENST00000540301 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
KLHL42-203ENST00000540301 NBPF5PQ86XG9 351 aaPredicted RBP11.25□□□□□ -0.61
KLHL42-203ENST00000540301 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
KLHL42-203ENST00000540301 BCORQ6W2J9 1755 aa11.25□□□□□ -0.61
KLHL42-203ENST00000540301 RNMTO43148 476 aaKnown RBP11.24□□□□□ -0.61
KLHL42-203ENST00000540301 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
KLHL42-203ENST00000540301 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
KLHL42-203ENST00000540301 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
KLHL42-203ENST00000540301 LARGE2Q8N3Y3 721 aa11.24□□□□□ -0.61
KLHL42-203ENST00000540301 GPRC5DQ9NZD1 345 aa11.24□□□□□ -0.61
KLHL42-203ENST00000540301 COL4A5P29400 1685 aa11.24□□□□□ -0.61
KLHL42-203ENST00000540301 FAM155AB1AL88 458 aaPredicted RBP11.23□□□□□ -0.61
KLHL42-203ENST00000540301 DLL1O00548 723 aa11.23□□□□□ -0.61
KLHL42-203ENST00000540301 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
KLHL42-203ENST00000540301 RGMBQ6NW40 437 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms