RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 HMGB2P26583 209 aaKnown RBP8.54□□□□□ -1.04
SNHG1-212ENST00000539975 PRKAR2BP31323 418 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 ZNF530Q6P9A1 599 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-212ENST00000539975 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNHG1-212ENST00000539975 GAS2L2Q8NHY3 880 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 RTF1Q92541 710 aaKnown RBP8.54□□□□□ -1.04
SNHG1-212ENST00000539975 TATDN2Q93075 761 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 FAM198AQ9UFP1 575 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 FAM182BQ5T319 152 aa8.53□□□□□ -1.04
SNHG1-212ENST00000539975 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
SNHG1-212ENST00000539975 MARCH10Q8NA82 808 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-212ENST00000539975 FAM208AQ9UK61 1670 aaKnown RBP8.53□□□□□ -1.04
SNHG1-212ENST00000539975 MAP2P11137 1827 aaKnown RBP8.52□□□□□ -1.04
SNHG1-212ENST00000539975 SOCS7O14512 581 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 GNPATO15228 680 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 BAG6P46379 1132 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 WNT2BQ93097 391 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 DCAF5Q96JK2 942 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 ZFRQ96KR1 1074 aaKnown RBP8.52□□□□□ -1.05
SNHG1-212ENST00000539975 HCSTQ9UBK5 93 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 PNMA3Q9UL41 463 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 TNS2Q63HR2 1409 aa8.52□□□□□ -1.05
SNHG1-212ENST00000539975 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 KDRP35968 1356 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 GPR37O15354 613 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 TRIM37O94972 964 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 APBA3O96018 575 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 PHKG2P15735 406 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 CABP4P57796 275 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 KCTD12Q96CX2 325 aaKnown RBP8.51□□□□□ -1.05
SNHG1-212ENST00000539975 ACSBG1Q96GR2 724 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 SEPT9Q9UHD8 586 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-212ENST00000539975 DISP2A7MBM2 1401 aa8.51□□□□□ -1.05
SNHG1-212ENST00000539975 MEGF6O75095 1541 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 CCER2I3L3R5 266 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 LMOD3Q0VAK6 560 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 TEFQ10587 303 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 MTHFSDQ2M296 383 aaKnown RBP8.5□□□□□ -1.05
SNHG1-212ENST00000539975 MPRIPQ6WCQ1 1025 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 FAM9BQ8IZU0 186 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
SNHG1-212ENST00000539975 RUNDC1Q96C34 613 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 TMOD3Q9NYL9 352 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 ADAMTS8Q9UP79 889 aa8.5□□□□□ -1.05
SNHG1-212ENST00000539975 RGPD5Q99666 1765 aa8.49□□□□□ -1.05
SNHG1-212ENST00000539975 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
SNHG1-212ENST00000539975 CYP27B1O15528 508 aa8.49□□□□□ -1.05
SNHG1-212ENST00000539975 HTATSF1O43719 755 aaKnown RBP8.49□□□□□ -1.05
SNHG1-212ENST00000539975 OATP04181 439 aa8.49□□□□□ -1.05
SNHG1-212ENST00000539975 NCAPD2Q15021 1401 aa8.48□□□□□ -1.05
SNHG1-212ENST00000539975 RIPK4P57078 832 aa8.48□□□□□ -1.05
SNHG1-212ENST00000539975 NEUROD2Q15784 382 aa8.48□□□□□ -1.05
SNHG1-212ENST00000539975 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
SNHG1-212ENST00000539975 SMARCC1Q92922 1105 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-212ENST00000539975 PHACTR3Q96KR7 559 aa8.48□□□□□ -1.05
SNHG1-212ENST00000539975 ADGRG1Q9Y653 693 aa8.48□□□□□ -1.05
SNHG1-212ENST00000539975 COL3A1P02461 1466 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-212ENST00000539975 THSD7AQ9UPZ6 1657 aa8.48□□□□□ -1.05
SNHG1-212ENST00000539975 BCL9O00512 1426 aa8.47□□□□□ -1.05
SNHG1-212ENST00000539975 SOWAHBA6NEL2 793 aa8.47□□□□□ -1.05
SNHG1-212ENST00000539975 CALD1Q05682 793 aaKnown RBP8.47□□□□□ -1.05
SNHG1-212ENST00000539975 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
SNHG1-212ENST00000539975 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
SNHG1-212ENST00000539975 TTC5Q8N0Z6 440 aa8.47□□□□□ -1.05
SNHG1-212ENST00000539975 PNISRQ8TF01 805 aaKnown RBP8.47□□□□□ -1.05
SNHG1-212ENST00000539975 LRCH3Q96II8 777 aa8.47□□□□□ -1.05
SNHG1-212ENST00000539975 MAP3K5Q99683 1374 aa8.47□□□□□ -1.05
SNHG1-212ENST00000539975 PARP4Q9UKK3 1724 aaKnown RBP8.46□□□□□ -1.05
SNHG1-212ENST00000539975 C3orf80F5H4A9 247 aa8.46□□□□□ -1.06
SNHG1-212ENST00000539975 SMAPO00193 183 aa8.46□□□□□ -1.06
SNHG1-212ENST00000539975 PLSCR1O15162 318 aa8.46□□□□□ -1.06
SNHG1-212ENST00000539975 KCNQ2O43526 872 aa8.46□□□□□ -1.06
SNHG1-212ENST00000539975 NBPF14Q5TI25 921 aa8.46□□□□□ -1.06
SNHG1-212ENST00000539975 NFATC2IPQ8NCF5 419 aa8.46□□□□□ -1.06
SNHG1-212ENST00000539975 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-212ENST00000539975 LRRC37A3O60309 1634 aa8.45□□□□□ -1.06
SNHG1-212ENST00000539975 RNMTO43148 476 aaKnown RBP8.45□□□□□ -1.06
SNHG1-212ENST00000539975 TMPOP42166 694 aaKnown RBP8.45□□□□□ -1.06
SNHG1-212ENST00000539975 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
SNHG1-212ENST00000539975 NGEFQ8N5V2 710 aa8.45□□□□□ -1.06
SNHG1-212ENST00000539975 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
SNHG1-212ENST00000539975 PLEKHF1Q96S99 279 aa8.45□□□□□ -1.06
SNHG1-212ENST00000539975 SLC52A2Q9HAB3 445 aa8.45□□□□□ -1.06
SNHG1-212ENST00000539975 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 APAF1O14727 1248 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 DNAJB2P25686 324 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 CCDC184Q52MB2 194 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 SLC27A3Q5K4L6 730 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 NPM2Q86SE8 214 aaKnown RBP8.44□□□□□ -1.06
SNHG1-212ENST00000539975 PIGBQ92521 554 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 LGR6Q9HBX8 967 aa8.44□□□□□ -1.06
SNHG1-212ENST00000539975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.43□□□□□ -1.06
SNHG1-212ENST00000539975 FECHP22830 423 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms