RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 TTLL7Q6ZT98 887 aa27.79■■■□□ 2.04
HOMER3-204ENST00000539827 ERICH6Q7L0X2 663 aa27.79■■■□□ 2.04
HOMER3-204ENST00000539827 PLBD2Q8NHP8 589 aa27.79■■■□□ 2.04
HOMER3-204ENST00000539827 LRP6O75581 1613 aa27.78■■■□□ 2.04
HOMER3-204ENST00000539827 GCKRQ14397 625 aa27.78■■■□□ 2.04
HOMER3-204ENST00000539827 DNAJC10Q8IXB1 793 aa27.78■■■□□ 2.04
HOMER3-204ENST00000539827 C8orf37Q96NL8 207 aa27.78■■■□□ 2.04
HOMER3-204ENST00000539827 HDAC5Q9UQL6 1122 aa27.78■■■□□ 2.04
HOMER3-204ENST00000539827 BCL9O00512 1426 aa27.78■■■□□ 2.04
HOMER3-204ENST00000539827 ARFGEF2Q9Y6D5 1785 aa27.78■■■□□ 2.04
HOMER3-204ENST00000539827 PRIM1P49642 420 aaKnown RBP27.77■■■□□ 2.04
HOMER3-204ENST00000539827 ATP5J2-PTCD1G3V325 749 aa27.76■■■□□ 2.03
HOMER3-204ENST00000539827 KAZALD1Q96I82 304 aa27.76■■■□□ 2.03
HOMER3-204ENST00000539827 NGLY1Q96IV0 654 aa27.76■■■□□ 2.03
HOMER3-204ENST00000539827 MTX1Q13505 466 aa27.75■■■□□ 2.03
HOMER3-204ENST00000539827 UNC5CLQ8IV45 518 aa27.75■■■□□ 2.03
HOMER3-204ENST00000539827 VSIG10Q8N0Z9 540 aa27.75■■■□□ 2.03
HOMER3-204ENST00000539827 JARID2Q92833 1246 aaPredicted RBP27.75■■■□□ 2.03
HOMER3-204ENST00000539827 RAB11FIP3O75154 756 aa27.74■■■□□ 2.03
HOMER3-204ENST00000539827 TBC1D32Q96NH3 1257 aa27.74■■■□□ 2.03
HOMER3-204ENST00000539827 BICC1Q9H694 974 aaKnown RBP27.74■■■□□ 2.03
HOMER3-204ENST00000539827 BARGINQ6ZT62 677 aa27.73■■■□□ 2.03
HOMER3-204ENST00000539827 MARCH10Q8NA82 808 aaPredicted RBP27.73■■■□□ 2.03
HOMER3-204ENST00000539827 IL1RAPL2Q9NP60 686 aa27.73■■■□□ 2.03
HOMER3-204ENST00000539827 AFDNP55196 1824 aaKnown RBP27.73■■■□□ 2.03
HOMER3-204ENST00000539827 DOT1LQ8TEK3 1739 aa27.73■■■□□ 2.03
HOMER3-204ENST00000539827 A0A0G2JS52 829 aa27.73■■■□□ 2.03
HOMER3-204ENST00000539827 PDE1AP54750 535 aa27.73■■■□□ 2.03
HOMER3-204ENST00000539827 TEX13AQ9BXU3 409 aaPredicted RBP27.73■■■□□ 2.03
HOMER3-204ENST00000539827 TBC1D9Q6ZT07 1266 aa27.72■■■□□ 2.03
HOMER3-204ENST00000539827 ACSBG1Q96GR2 724 aa27.71■■■□□ 2.03
HOMER3-204ENST00000539827 CDC45O75419 566 aa27.71■■■□□ 2.03
HOMER3-204ENST00000539827 RHPN1Q8TCX5 695 aa27.71■■■□□ 2.03
HOMER3-204ENST00000539827 SLC4A9Q96Q91 983 aa27.71■■■□□ 2.03
HOMER3-204ENST00000539827 ZBTB3Q9H5J0 574 aa27.71■■■□□ 2.03
HOMER3-204ENST00000539827 ZNF330Q9Y3S2 320 aaPredicted RBP27.71■■■□□ 2.03
HOMER3-204ENST00000539827 SALL3Q9BXA9 1300 aa27.71■■■□□ 2.03
HOMER3-204ENST00000539827 TSHZ3Q63HK5 1081 aa27.7■■■□□ 2.03
HOMER3-204ENST00000539827 OSBPL3Q9H4L5 887 aa27.7■■■□□ 2.03
HOMER3-204ENST00000539827 PA2G4Q9UQ80 394 aaKnown RBP27.7■■■□□ 2.03
HOMER3-204ENST00000539827 SDSP20132 328 aa27.69■■■□□ 2.02
HOMER3-204ENST00000539827 EPHA10Q5JZY3 1008 aa27.69■■■□□ 2.02
HOMER3-204ENST00000539827 C22orf23Q9BZE7 217 aa27.69■■■□□ 2.02
HOMER3-204ENST00000539827 NUP188Q5SRE5 1749 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 STARD3NLO95772 234 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 OS9Q13438 667 aaPredicted RBP27.68■■■□□ 2.02
HOMER3-204ENST00000539827 FAM98CQ17RN3 349 aaKnown RBP27.68■■■□□ 2.02
HOMER3-204ENST00000539827 KIF1BPQ96EK5 621 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 BCL9LQ86UU0 1499 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 A0A087WZG4 1122 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 MX1P20591 662 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 SLC4A3P48751 1232 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 HSP90AB4PQ58FF6 505 aa27.68■■■□□ 2.02
HOMER3-204ENST00000539827 UBE3BQ7Z3V4 1068 aa27.67■■■□□ 2.02
HOMER3-204ENST00000539827 NUTM1Q86Y26 1132 aa27.67■■■□□ 2.02
HOMER3-204ENST00000539827 VPS72Q15906 364 aa27.66■■■□□ 2.02
HOMER3-204ENST00000539827 CYP19A1P11511 503 aaPredicted RBP27.64■■■□□ 2.01
HOMER3-204ENST00000539827 SPATA31A6Q5VVP1 1343 aa27.63■■■□□ 2.01
HOMER3-204ENST00000539827 STAP2Q9UGK3 403 aa27.63■■■□□ 2.01
HOMER3-204ENST00000539827 CASP7P55210 303 aa27.62■■■□□ 2.01
HOMER3-204ENST00000539827 FNBP4Q8N3X1 1017 aaPredicted RBP27.62■■■□□ 2.01
HOMER3-204ENST00000539827 CWC25Q9NXE8 425 aaPredicted RBP27.62■■■□□ 2.01
HOMER3-204ENST00000539827 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.62■■■□□ 2.01
HOMER3-204ENST00000539827 ARXQ96QS3 562 aa27.62■■■□□ 2.01
HOMER3-204ENST00000539827 DAXXQ9UER7 740 aaPredicted RBP27.61■■■□□ 2.01
HOMER3-204ENST00000539827 H7C1W4 665 aa27.6■■■□□ 2.01
HOMER3-204ENST00000539827 KIF6Q6ZMV9 814 aa27.6■■■□□ 2.01
HOMER3-204ENST00000539827 USP21Q9UK80 565 aa27.6■■■□□ 2.01
HOMER3-204ENST00000539827 RTL5Q5HYW3 569 aaPredicted RBP27.6■■■□□ 2.01
HOMER3-204ENST00000539827 KLHDC4Q8TBB5 520 aa27.6■■■□□ 2.01
HOMER3-204ENST00000539827 TJP1Q07157 1748 aa27.59■■■□□ 2.01
HOMER3-204ENST00000539827 HSPA1LP34931 641 aa27.59■■■□□ 2.01
HOMER3-204ENST00000539827 G3BP1Q13283 466 aaKnown RBP eCLIP27.59■■■□□ 2.01
HOMER3-204ENST00000539827 ZBTB1Q9Y2K1 713 aa27.59■■■□□ 2.01
HOMER3-204ENST00000539827 ERC1Q8IUD2 1116 aa27.59■■■□□ 2.01
HOMER3-204ENST00000539827 CCDC191Q8NCU4 936 aa27.58■■■□□ 2.01
HOMER3-204ENST00000539827 SIL1Q9H173 461 aa27.58■■■□□ 2.01
HOMER3-204ENST00000539827 COL15A1P39059 1388 aa27.57■■■□□ 2
HOMER3-204ENST00000539827 TCIRG1Q13488 830 aa27.57■■■□□ 2
HOMER3-204ENST00000539827 ISCA1Q9BUE6 129 aa27.57■■■□□ 2
HOMER3-204ENST00000539827 AOX1Q06278 1338 aa27.57■■■□□ 2
HOMER3-204ENST00000539827 KCNQ2O43526 872 aa27.57■■■□□ 2
HOMER3-204ENST00000539827 RABL6Q3YEC7 729 aaPredicted RBP27.57■■■□□ 2
HOMER3-204ENST00000539827 MEX3CQ5U5Q3 659 aaKnown RBP27.56■■■□□ 2
HOMER3-204ENST00000539827 TUBGCP6Q96RT7 1819 aa27.56■■■□□ 2
HOMER3-204ENST00000539827 TRIM6-TRIM34B2RNG4 842 aa27.55■■■□□ 2
HOMER3-204ENST00000539827 SASH1O94885 1247 aa27.55■■■□□ 2
HOMER3-204ENST00000539827 CLASRPQ8N2M8 674 aaKnown RBP27.55■■■□□ 2
HOMER3-204ENST00000539827 RFX5P48382 616 aaPredicted RBP27.55■■■□□ 2
HOMER3-204ENST00000539827 RBM25P49756 843 aaKnown RBP27.55■■■□□ 2
HOMER3-204ENST00000539827 CASC1Q6TDU7 716 aa27.55■■■□□ 2
HOMER3-204ENST00000539827 RILPL2Q969X0 211 aa27.55■■■□□ 2
HOMER3-204ENST00000539827 MAP3K15Q6ZN16 1313 aa27.54■■■□□ 2
HOMER3-204ENST00000539827 FOXO4P98177 505 aa27.54■■■□□ 2
HOMER3-204ENST00000539827 LMBR1LQ6UX01 489 aa27.54■■■□□ 2
HOMER3-204ENST00000539827 ATP6V1AP38606 617 aa27.53■■■□□ 2
HOMER3-204ENST00000539827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.53■■■□□ 2
HOMER3-204ENST00000539827 HLFQ16534 295 aa27.53■■■□□ 2
HOMER3-204ENST00000539827 PI4K2BQ8TCG2 481 aa27.53■■■□□ 2
HOMER3-204ENST00000539827 CHMP3Q9Y3E7 222 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms