RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 GIGYF1O75420 1035 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 PLEKHO1Q53GL0 409 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 HEG1Q9ULI3 1381 aa15.18■□□□□ 0.02
SFSWAP-208ENST00000539506 CWF19L2Q2TBE0 894 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-208ENST00000539506 MAP3K2Q9Y2U5 619 aa15.18■□□□□ 0.02
SFSWAP-208ENST00000539506 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
SFSWAP-208ENST00000539506 ANAPC15P60006 121 aa15.18■□□□□ 0.02
SFSWAP-208ENST00000539506 KIF1BPQ96EK5 621 aa15.18■□□□□ 0.02
SFSWAP-208ENST00000539506 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
SFSWAP-208ENST00000539506 HSPA4P34932 840 aa15.17■□□□□ 0.02
SFSWAP-208ENST00000539506 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
SFSWAP-208ENST00000539506 PA2G4Q9UQ80 394 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-208ENST00000539506 PDLIM2Q96JY6 352 aa15.17■□□□□ 0.02
SFSWAP-208ENST00000539506 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-208ENST00000539506 SLIT3O75094 1523 aa15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 SGSM2O43147 1006 aa15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 BRD1O95696 1058 aa15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 CPA1P15085 419 aa15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 KAZALD1Q96I82 304 aa15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 LSG1Q9H089 658 aaKnown RBP15.16■□□□□ 0.02
SFSWAP-208ENST00000539506 MCCP23508 829 aa15.15■□□□□ 0.02
SFSWAP-208ENST00000539506 ZNF142P52746 1687 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-208ENST00000539506 PDIA6Q15084 440 aa15.15■□□□□ 0.02
SFSWAP-208ENST00000539506 C1orf141Q5JVX7 400 aa15.15■□□□□ 0.02
SFSWAP-208ENST00000539506 IGSF3O75054 1194 aa15.15■□□□□ 0.02
SFSWAP-208ENST00000539506 MTX1Q13505 466 aa15.15■□□□□ 0.02
SFSWAP-208ENST00000539506 USP48Q86UV5 1035 aa15.15■□□□□ 0.02
SFSWAP-208ENST00000539506 CWC27Q6UX04 472 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-208ENST00000539506 TSPY26PQ9H489 355 aa15.14■□□□□ 0.01
SFSWAP-208ENST00000539506 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
SFSWAP-208ENST00000539506 SNX14Q9Y5W7 946 aa15.14■□□□□ 0.01
SFSWAP-208ENST00000539506 ZNF500O60304 480 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-208ENST00000539506 MCM2P49736 904 aa15.14■□□□□ 0.01
SFSWAP-208ENST00000539506 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
SFSWAP-208ENST00000539506 RAD50Q92878 1312 aa15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 CBX1P83916 185 aa15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 NPHP4O75161 1426 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 USP42Q9H9J4 1324 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 SLC39A6Q13433 755 aa15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 KRT28Q7Z3Y7 464 aa15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 SPC24Q8NBT2 197 aa15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 CCDC39Q9UFE4 941 aa15.13■□□□□ 0.01
SFSWAP-208ENST00000539506 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 DDX17Q92841 729 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 C9orf78Q9NZ63 289 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 AIMP1Q12904 312 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 SUCLG2Q96I99 432 aa15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 CRYBG1Q9Y4K1 1723 aa15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 FIBPO43427 364 aa15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 TTC14Q96N46 770 aa15.12■□□□□ 0.01
SFSWAP-208ENST00000539506 PTH1RQ03431 593 aa15.11■□□□□ 0.01
SFSWAP-208ENST00000539506 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
SFSWAP-208ENST00000539506 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
SFSWAP-208ENST00000539506 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-208ENST00000539506 SIPA1L3O60292 1781 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-208ENST00000539506 CAMTA1Q9Y6Y1 1673 aa15.11■□□□□ 0.01
SFSWAP-208ENST00000539506 ALDH1L1O75891 902 aa15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 SASH1O94885 1247 aa15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 IGKV5-2P06315 115 aa15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 ERBB3P21860 1342 aa15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 COL9A3Q14050 684 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 BICC1Q9H694 974 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 GIMAP6Q6P9H5 292 aa15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 RUFY3Q7L099 469 aa15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 PRDM4Q9UKN5 801 aa15.1■□□□□ 0.01
SFSWAP-208ENST00000539506 OVOS2A0A0G2JMS6 1433 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 EPB41L2O43491 1005 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 ADCY5O95622 1261 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 AK2P54819 239 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 KIAA2012Q0VF49 1180 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 SASS6Q6UVJ0 657 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 TTC41PQ6P2S7 1318 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 ADCK5Q3MIX3 580 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 HSP90AB4PQ58FF6 505 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 KLHDC4Q8TBB5 520 aa15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-208ENST00000539506 KDM6AO15550 1401 aaPredicted RBP15.08■□□□□ 0.01
SFSWAP-208ENST00000539506 GRM8O00222 908 aa15.08■□□□□ 0.01
SFSWAP-208ENST00000539506 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0.01
SFSWAP-208ENST00000539506 CLASRPQ8N2M8 674 aaKnown RBP15.08■□□□□ 0.01
SFSWAP-208ENST00000539506 EAF2Q96CJ1 260 aaPredicted RBP15.08■□□□□ 0.01
SFSWAP-208ENST00000539506 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 UTYO14607 1347 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 LARGE1O95461 756 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 LINS1Q8NG48 757 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms