RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 HNRNPUQ00839 825 aaKnown RBP eCLIP1.75□□□□□ -2.137e-6■□□□□ 10.8
HIF1A-204ENST00000539097 FMR1Q06787 632 aaKnown RBP eCLIP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 CBLBQ13191 982 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 SF3A1Q15459 793 aaKnown RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 PPP1R18Q6NYC8 613 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 NLRP8Q86W28 1048 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 CYLDQ9NQC7 956 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 IQSEC3Q9UPP2 1182 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 EMILIN1Q9Y6C2 1016 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 ZNF326Q5BKZ1 582 aaKnown RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 ZDHHC1Q8WTX9 485 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 KIFC2Q96AC6 838 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 MRRFQ96E11 262 aaKnown RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 KLF16Q9BXK1 252 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 CFHR5Q9BXR6 569 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 QTRT2Q9H974 415 aaKnown RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 STRIP2Q9ULQ0 834 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 CADPSQ9ULU8 1353 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 KCNC4Q03721 635 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 GRIN2CQ14957 1233 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 DIEXFQ68CQ4 756 aaKnown RBP1.74□□□□□ -2.13
HIF1A-204ENST00000539097 PI16Q6UXB8 463 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 ETFBKMTQ8IXQ9 262 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 KCNQ5Q9NR82 932 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 ZNF358Q9NW07 568 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 PCDHB11Q9Y5F2 797 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 IL2RAP01589 272 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 MPSTP25325 297 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 SNIP1Q8TAD8 396 aaKnown RBP1.74□□□□□ -2.13
HIF1A-204ENST00000539097 HELQQ8TDG4 1101 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 GIPC2Q8TF65 315 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 C7orf43Q8WVR3 580 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 KCTD15Q96SI1 283 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-204ENST00000539097 KRTAP4-5Q9BYR2 181 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 DCTN4Q9UJW0 460 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 PPM1HQ9ULR3 514 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 DOLKQ9UPQ8 538 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 CHMP3Q9Y3E7 222 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 RBM19Q9Y4C8 960 aaKnown RBP1.74□□□□□ -2.13
HIF1A-204ENST00000539097 MAP3K6O95382 1288 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 P4HBP07237 508 aaKnown RBP1.74□□□□□ -2.13
HIF1A-204ENST00000539097 MYT1Q01538 1121 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 PRPF40BQ6NWY9 871 aaKnown RBP1.74□□□□□ -2.13
HIF1A-204ENST00000539097 WNT8BQ93098 351 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 ITPKCQ96DU7 683 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 SOX17Q9H6I2 414 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-204ENST00000539097 ZFAND3Q9H8U3 227 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 ARHGEF10LQ9HCE6 1279 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 SERTAD1Q9UHV2 236 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 EML1O00423 815 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 TCF3P15923 654 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 DSC3Q14574 896 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 COX20Q5RI15 118 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 TMC7Q7Z402 723 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 MRGPRX2Q96LB1 330 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 AGBL1Q96MI9 1066 aa1.74□□□□□ -2.13
HIF1A-204ENST00000539097 J3QL48 77 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 FZD6O60353 706 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 THBS1P07996 1170 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 KIAA0319Q5VV43 1072 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 NBPF10Q6P3W6 841 aaKnown RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 ZBTB33Q86T24 672 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 TAB3Q8N5C8 712 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 BACH2Q9BYV9 841 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 GRIP2Q9C0E4 1043 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 IRS1P35568 1242 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 RPS26P62854 115 aaKnown RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 FKBP4Q02790 459 aaKnown RBP eCLIP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 ARID5BQ14865 1188 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 ADAMTSL4Q6UY14 1074 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 ZNF598Q86UK7 904 aaKnown RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 DZIP3Q86Y13 1208 aaKnown RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 CRISPLD1Q9H336 500 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 CTSHP09668 335 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 TNNI2P48788 182 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 RAD51AP2Q09MP3 1159 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 AGERQ15109 404 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 RTN1Q16799 776 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 PPP1R26Q5T8A7 1209 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 SV2BQ7L1I2 683 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 NOP9Q86U38 636 aaKnown RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 GJD3Q8N144 294 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 SYNPOQ8N3V7 929 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 ZNF280CQ8ND82 737 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 CHMP7Q8WUX9 453 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-204ENST00000539097 RELTQ969Z4 430 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 PRDM6Q9NQX0 595 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 KLK14Q9P0G3 267 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 PKD2L1Q9P0L9 805 aa1.73□□□□□ -2.13
HIF1A-204ENST00000539097 F6X3S4 739 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 MZF1P28698 734 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 MARSP56192 900 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 ORC1Q13415 861 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 PWP1Q13610 501 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 TRIP4Q15650 581 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 C11orf91Q3C1V1 193 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 SCG3Q8WXD2 468 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 HINFPQ9BQA5 517 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 PRR13Q9NZ81 148 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms