RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 FAM43AQ8N2R8 423 aa30.22■■■□□ 2.43
RAB40C-204ENST00000538492 TTC41PQ6P2S7 1318 aa30.22■■■□□ 2.43
RAB40C-204ENST00000538492 C5P01031 1676 aa30.22■■■□□ 2.43
RAB40C-204ENST00000538492 GLRX3O76003 335 aaKnown RBP30.21■■■□□ 2.43
RAB40C-204ENST00000538492 ISY1Q9ULR0 285 aaKnown RBP30.21■■■□□ 2.43
RAB40C-204ENST00000538492 USP42Q9H9J4 1324 aaKnown RBP30.21■■■□□ 2.43
RAB40C-204ENST00000538492 LMBRD1Q9NUN5 540 aa30.2■■■□□ 2.43
RAB40C-204ENST00000538492 HDAC5Q9UQL6 1122 aa30.2■■■□□ 2.43
RAB40C-204ENST00000538492 STRCP1A6NGW2 1772 aa30.2■■■□□ 2.43
RAB40C-204ENST00000538492 IGKV5-2P06315 115 aa30.2■■■□□ 2.42
RAB40C-204ENST00000538492 NCLP19338 710 aaKnown RBP30.2■■■□□ 2.42
RAB40C-204ENST00000538492 ZNF496Q96IT1 587 aaPredicted RBP30.2■■■□□ 2.42
RAB40C-204ENST00000538492 RAD50Q92878 1312 aa30.2■■■□□ 2.42
RAB40C-204ENST00000538492 LMTK3Q96Q04 1460 aa30.2■■■□□ 2.42
RAB40C-204ENST00000538492 IFIT2P09913 472 aaKnown RBP30.19■■■□□ 2.42
RAB40C-204ENST00000538492 CUL4AQ13619 759 aa30.19■■■□□ 2.42
RAB40C-204ENST00000538492 IFNL2Q8IZJ0 200 aa30.19■■■□□ 2.42
RAB40C-204ENST00000538492 IL17RAQ96F46 866 aa30.19■■■□□ 2.42
RAB40C-204ENST00000538492 PIP4K2AP48426 406 aaPredicted RBP30.18■■■□□ 2.42
RAB40C-204ENST00000538492 XAGE3Q8WTP9 111 aa30.18■■■□□ 2.42
RAB40C-204ENST00000538492 ECHDC1Q9NTX5 307 aa30.18■■■□□ 2.42
RAB40C-204ENST00000538492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.18■■■□□ 2.42
RAB40C-204ENST00000538492 AACSQ86V21 672 aa30.18■■■□□ 2.42
RAB40C-204ENST00000538492 ERC1Q8IUD2 1116 aa30.18■■■□□ 2.42
RAB40C-204ENST00000538492 LSG1Q9H089 658 aaKnown RBP30.18■■■□□ 2.42
RAB40C-204ENST00000538492 COPS6Q7L5N1 327 aa30.17■■■□□ 2.42
RAB40C-204ENST00000538492 EPB41L2O43491 1005 aaKnown RBP30.17■■■□□ 2.42
RAB40C-204ENST00000538492 PRPF40AO75400 957 aaKnown RBP30.17■■■□□ 2.42
RAB40C-204ENST00000538492 COL18A1P39060 1754 aa30.17■■■□□ 2.42
RAB40C-204ENST00000538492 UTYO14607 1347 aa30.16■■■□□ 2.42
RAB40C-204ENST00000538492 LARP1Q6PKG0 1096 aaKnown RBP30.16■■■□□ 2.42
RAB40C-204ENST00000538492 KIAA1211Q6ZU35 1233 aa30.16■■■□□ 2.42
RAB40C-204ENST00000538492 SIL1Q9H173 461 aa30.16■■■□□ 2.42
RAB40C-204ENST00000538492 CYP27B1O15528 508 aa30.15■■■□□ 2.42
RAB40C-204ENST00000538492 DIAPH3Q9NSV4 1193 aa30.15■■■□□ 2.42
RAB40C-204ENST00000538492 USP16Q9Y5T5 823 aa30.15■■■□□ 2.42
RAB40C-204ENST00000538492 SNX14Q9Y5W7 946 aa30.15■■■□□ 2.42
RAB40C-204ENST00000538492 CRYBG1Q9Y4K1 1723 aa30.15■■■□□ 2.42
RAB40C-204ENST00000538492 SASH1O94885 1247 aa30.15■■■□□ 2.42
RAB40C-204ENST00000538492 NEXNQ0ZGT2 675 aa30.14■■■□□ 2.42
RAB40C-204ENST00000538492 CAVIN1Q6NZI2 390 aaKnown RBP30.14■■■□□ 2.42
RAB40C-204ENST00000538492 GPATCH3Q96I76 525 aa30.14■■■□□ 2.42
RAB40C-204ENST00000538492 MYD88Q99836 296 aa30.14■■■□□ 2.42
RAB40C-204ENST00000538492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.14■■■□□ 2.42
RAB40C-204ENST00000538492 RASEFQ8IZ41 740 aa30.14■■■□□ 2.42
RAB40C-204ENST00000538492 TTC5Q8N0Z6 440 aa30.14■■■□□ 2.42
RAB40C-204ENST00000538492 G3BP1Q13283 466 aaKnown RBP eCLIP30.13■■■□□ 2.41
RAB40C-204ENST00000538492 KLHDC4Q8TBB5 520 aa30.13■■■□□ 2.41
RAB40C-204ENST00000538492 NEURL1BA8MQ27 555 aa30.13■■■□□ 2.41
RAB40C-204ENST00000538492 INTS4Q96HW7 963 aaKnown RBP30.13■■■□□ 2.41
RAB40C-204ENST00000538492 TNS3Q68CZ2 1445 aa30.13■■■□□ 2.41
RAB40C-204ENST00000538492 CADPS2Q86UW7 1296 aa30.12■■■□□ 2.41
RAB40C-204ENST00000538492 CCDC8Q9H0W5 538 aaPredicted RBP30.12■■■□□ 2.41
RAB40C-204ENST00000538492 DCAF5Q96JK2 942 aa30.12■■■□□ 2.41
RAB40C-204ENST00000538492 EAF2Q96CJ1 260 aaPredicted RBP30.11■■■□□ 2.41
RAB40C-204ENST00000538492 RRAGDQ9NQL2 400 aaPredicted RBP30.11■■■□□ 2.41
RAB40C-204ENST00000538492 JARID2Q92833 1246 aaPredicted RBP30.11■■■□□ 2.41
RAB40C-204ENST00000538492 DCCP43146 1447 aa30.11■■■□□ 2.41
RAB40C-204ENST00000538492 GCKRQ14397 625 aa30.1■■■□□ 2.41
RAB40C-204ENST00000538492 BRD1O95696 1058 aa30.1■■■□□ 2.41
RAB40C-204ENST00000538492 SNRPA1P09661 255 aaKnown RBP30.1■■■□□ 2.41
RAB40C-204ENST00000538492 METTL22Q9BUU2 404 aaPredicted RBP30.1■■■□□ 2.41
RAB40C-204ENST00000538492 TLR7Q9NYK1 1049 aaKnown RBP30.1■■■□□ 2.41
RAB40C-204ENST00000538492 EPHA10Q5JZY3 1008 aa30.09■■■□□ 2.41
RAB40C-204ENST00000538492 ANKRD13DQ6ZTN6 518 aa30.09■■■□□ 2.41
RAB40C-204ENST00000538492 LARP6Q9BRS8 491 aaKnown RBP30.09■■■□□ 2.41
RAB40C-204ENST00000538492 GPT2Q8TD30 523 aa30.09■■■□□ 2.41
RAB40C-204ENST00000538492 PTH1RQ03431 593 aa30.08■■■□□ 2.41
RAB40C-204ENST00000538492 RUFY2Q8WXA3 655 aa30.08■■■□□ 2.41
RAB40C-204ENST00000538492 SPATA31A3Q5VYP0 1347 aa30.07■■■□□ 2.4
RAB40C-204ENST00000538492 EVI5LQ96CN4 794 aa30.07■■■□□ 2.4
RAB40C-204ENST00000538492 CPA1P15085 419 aa30.07■■■□□ 2.4
RAB40C-204ENST00000538492 ZSCAN23Q3MJ62 389 aa30.07■■■□□ 2.4
RAB40C-204ENST00000538492 LRP10Q7Z4F1 713 aa30.07■■■□□ 2.4
RAB40C-204ENST00000538492 FMNL2Q96PY5 1086 aa30.07■■■□□ 2.4
RAB40C-204ENST00000538492 HSPA2P54652 639 aa30.06■■■□□ 2.4
RAB40C-204ENST00000538492 CABP4P57796 275 aa30.06■■■□□ 2.4
RAB40C-204ENST00000538492 AK2P54819 239 aa30.06■■■□□ 2.4
RAB40C-204ENST00000538492 TTC14Q96N46 770 aa30.06■■■□□ 2.4
RAB40C-204ENST00000538492 RBM27Q9P2N5 1060 aaKnown RBP30.06■■■□□ 2.4
RAB40C-204ENST00000538492 FOXD4L6Q3SYB3 417 aaPredicted RBP30.05■■■□□ 2.4
RAB40C-204ENST00000538492 FOXD4L3Q6VB84 417 aaPredicted RBP30.05■■■□□ 2.4
RAB40C-204ENST00000538492 CASTP20810 708 aaKnown RBP30.04■■■□□ 2.4
RAB40C-204ENST00000538492 PRPF40BQ6NWY9 871 aaKnown RBP30.03■■■□□ 2.4
RAB40C-204ENST00000538492 BOLA2Q9H3K6 86 aa30.03■■■□□ 2.4
RAB40C-204ENST00000538492 FAM227BQ96M60 508 aa30.03■■■□□ 2.4
RAB40C-204ENST00000538492 NSFL1CQ9UNZ2 370 aaKnown RBP30.03■■■□□ 2.4
RAB40C-204ENST00000538492 MRC1P22897 1456 aa30.02■■■□□ 2.4
RAB40C-204ENST00000538492 ATP5J2-PTCD1G3V325 749 aa30.02■■■□□ 2.4
RAB40C-204ENST00000538492 PTCD1O75127 700 aaKnown RBP30.02■■■□□ 2.4
RAB40C-204ENST00000538492 ZNF445P59923 1031 aa30.01■■■□□ 2.39
RAB40C-204ENST00000538492 RUFY3Q7L099 469 aa30.01■■■□□ 2.39
RAB40C-204ENST00000538492 UBE3BQ7Z3V4 1068 aa30.01■■■□□ 2.39
RAB40C-204ENST00000538492 PKD1L3Q7Z443 1732 aa30.01■■■□□ 2.39
RAB40C-204ENST00000538492 ADCK5Q3MIX3 580 aa30.01■■■□□ 2.39
RAB40C-204ENST00000538492 ABCC6O95255 1503 aa30■■■□□ 2.39
RAB40C-204ENST00000538492 NASPP49321 788 aaPredicted RBP30■■■□□ 2.39
RAB40C-204ENST00000538492 NMIQ13287 307 aaPredicted RBP29.99■■■□□ 2.39
RAB40C-204ENST00000538492 JAKMIP1Q96N16 626 aaKnown RBP29.99■■■□□ 2.39
RAB40C-204ENST00000538492 AFDNP55196 1824 aaKnown RBP29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms