RNA–Protein interactions for RNA: ENST00000538366.5

KIFAP3-206, Transcript of kinesin associated protein 3, humanhuman

TSL 2 BASIC

Gene KIFAP3, Length 3,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFAP3-206ENST00000538366 USP27XA6NNY8 438 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 KRT85P78386 507 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 DNAJC25Q9H1X3 360 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 ST7Q9NRC1 585 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 KIF20BQ96Q89 1820 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 ST3GAL1Q11201 340 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 FLIIQ13045 1269 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 CDC37L1Q7L3B6 337 aa13.46□□□□□ -0.25
KIFAP3-206ENST00000538366 PDE4CQ08493 712 aa13.46□□□□□ -0.26
KIFAP3-206ENST00000538366 ME3Q16798 604 aa13.46□□□□□ -0.26
KIFAP3-206ENST00000538366 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.26
KIFAP3-206ENST00000538366 PLA2G4DQ86XP0 818 aa13.46□□□□□ -0.26
KIFAP3-206ENST00000538366 CDK11BP21127 795 aaKnown RBP13.45□□□□□ -0.26
KIFAP3-206ENST00000538366 ZNF165P49910 485 aa13.45□□□□□ -0.26
KIFAP3-206ENST00000538366 PI4K2BQ8TCG2 481 aa13.45□□□□□ -0.26
KIFAP3-206ENST00000538366 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
KIFAP3-206ENST00000538366 PTH1RQ03431 593 aa13.45□□□□□ -0.26
KIFAP3-206ENST00000538366 TRMT1Q9NXH9 659 aaKnown RBP13.45□□□□□ -0.26
KIFAP3-206ENST00000538366 EPB41L2O43491 1005 aaKnown RBP13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 ELF2Q15723 593 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 CNTROBQ8N137 903 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 UBTFL1P0CB47 393 aaPredicted RBP13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 FBXO38Q6PIJ6 1188 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 C14orf37Q86TY3 774 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 USP44Q9H0E7 712 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 CYP46A1Q9Y6A2 500 aa13.44□□□□□ -0.26
KIFAP3-206ENST00000538366 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 NAP1L2Q9ULW6 460 aaPredicted RBP13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 CCDC66A2RUB6 948 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 CEBPAP49715 358 aaPredicted RBP13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 COL9A3Q14050 684 aaPredicted RBP13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 PTPN14Q15678 1187 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 PPP1R42Q7Z4L9 355 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 SPATA32Q96LK8 384 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 AOX1Q06278 1338 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 EDC4Q6P2E9 1401 aaKnown RBP13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 FRMPD1Q5SYB0 1578 aa13.43□□□□□ -0.26
KIFAP3-206ENST00000538366 NR1I2O75469 434 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 VPS53Q5VIR6 699 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 TDRD7Q8NHU6 1098 aaKnown RBP13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 LRRC8AQ8IWT6 810 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 TRERF1Q96PN7 1200 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 SH2B1Q9NRF2 756 aaPredicted RBP13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 TPCN1Q9ULQ1 816 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 CRB1P82279 1406 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 FILIP1Q7Z7B0 1213 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 ATP7BP35670 1465 aa13.42□□□□□ -0.26
KIFAP3-206ENST00000538366 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
KIFAP3-206ENST00000538366 SKILP12757 684 aa13.41□□□□□ -0.26
KIFAP3-206ENST00000538366 TIGD1Q96MW7 591 aa13.41□□□□□ -0.26
KIFAP3-206ENST00000538366 MTHFSDQ2M296 383 aaKnown RBP13.41□□□□□ -0.26
KIFAP3-206ENST00000538366 NUDT16Q96DE0 195 aaKnown RBP13.41□□□□□ -0.26
KIFAP3-206ENST00000538366 CLSTN2Q9H4D0 955 aa13.41□□□□□ -0.26
KIFAP3-206ENST00000538366 PIK3C2BO00750 1634 aa13.41□□□□□ -0.26
KIFAP3-206ENST00000538366 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 SSH3Q8TE77 659 aa13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 SRGAP3O43295 1099 aa13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 LEO1Q8WVC0 666 aaPredicted RBP13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 A0A087WWV3 80 aa13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 GOLGA6L19H0YKK7 550 aa13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 SYTL4Q96C24 671 aaPredicted RBP13.4□□□□□ -0.26
KIFAP3-206ENST00000538366 ELP1O95163 1332 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 STK3Q13188 491 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 CCDC30Q5VVM6 783 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 CPS1P31327 1500 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 PGBD1Q96JS3 809 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 CCDC171Q6TFL3 1326 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 NPHP3Q7Z494 1330 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
KIFAP3-206ENST00000538366 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
KIFAP3-206ENST00000538366 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
KIFAP3-206ENST00000538366 OS9Q13438 667 aaPredicted RBP13.38□□□□□ -0.27
KIFAP3-206ENST00000538366 C11orf57Q6ZUT1 292 aaPredicted RBP13.38□□□□□ -0.27
KIFAP3-206ENST00000538366 NYAP1Q6ZVC0 841 aa13.38□□□□□ -0.27
KIFAP3-206ENST00000538366 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
KIFAP3-206ENST00000538366 KIF1BPQ96EK5 621 aa13.38□□□□□ -0.27
KIFAP3-206ENST00000538366 ERO1AQ96HE7 468 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms