RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 SH3BP2P78314 561 aa7.87□□□□□ -1.15
SNHG1-207ENST00000537965 VPS72Q15906 364 aa7.87□□□□□ -1.15
SNHG1-207ENST00000537965 PKDCCQ504Y2 493 aa7.87□□□□□ -1.15
SNHG1-207ENST00000537965 MRGPRX2Q96LB1 330 aa7.87□□□□□ -1.15
SNHG1-207ENST00000537965 CCDC9Q9Y3X0 531 aaKnown RBP7.87□□□□□ -1.15
SNHG1-207ENST00000537965 YTHDC2Q9H6S0 1430 aaKnown RBP7.86□□□□□ -1.15
SNHG1-207ENST00000537965 PLCH1Q4KWH8 1693 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 GLI3P10071 1580 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 PRKCSHP14314 528 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-207ENST00000537965 TMEM132EQ6IEE7 984 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 SEPT12Q8IYM1 358 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 SNIP1Q8TAD8 396 aaKnown RBP7.86□□□□□ -1.15
SNHG1-207ENST00000537965 BAP1Q92560 729 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 MPHOSPH9Q99550 1183 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 MAP10Q9P2G4 905 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 TNS3Q68CZ2 1445 aa7.86□□□□□ -1.15
SNHG1-207ENST00000537965 SBNO1A3KN83 1393 aa7.85□□□□□ -1.15
SNHG1-207ENST00000537965 FAM187AA6NFU0 413 aa7.85□□□□□ -1.15
SNHG1-207ENST00000537965 BAG6P46379 1132 aa7.85□□□□□ -1.15
SNHG1-207ENST00000537965 CTDSPL2Q05D32 466 aa7.85□□□□□ -1.15
SNHG1-207ENST00000537965 KRT27Q7Z3Y8 459 aa7.85□□□□□ -1.15
SNHG1-207ENST00000537965 C14orf93Q9H972 538 aaKnown RBP7.85□□□□□ -1.15
SNHG1-207ENST00000537965 PIK3C2GO75747 1445 aa7.85□□□□□ -1.15
SNHG1-207ENST00000537965 SPATA31E1Q6ZUB1 1445 aa7.85□□□□□ -1.15
SNHG1-207ENST00000537965 TTC24A2A3L6 582 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-207ENST00000537965 MYT1Q01538 1121 aa7.84□□□□□ -1.15
SNHG1-207ENST00000537965 ZNF511Q8NB15 262 aa7.84□□□□□ -1.15
SNHG1-207ENST00000537965 PCMTD1Q96MG8 357 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-207ENST00000537965 POGKQ9P215 609 aa7.84□□□□□ -1.15
SNHG1-207ENST00000537965 LRP5O75197 1615 aa7.84□□□□□ -1.15
SNHG1-207ENST00000537965 EIF3AQ14152 1382 aaKnown RBP7.84□□□□□ -1.16
SNHG1-207ENST00000537965 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.16
SNHG1-207ENST00000537965 RGPD1P0DJD0 1748 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 ABCA3Q99758 1704 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 NRXN1Q9ULB1 1477 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 SIAH2O43255 324 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 DEFB132Q7Z7B7 95 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 EHBP1Q8NDI1 1231 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 ANKARQ7Z5J8 1434 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 PLEKHH1Q9ULM0 1364 aa7.83□□□□□ -1.16
SNHG1-207ENST00000537965 COL14A1Q05707 1796 aaKnown RBP7.82□□□□□ -1.16
SNHG1-207ENST00000537965 FAM83GA6ND36 823 aa7.82□□□□□ -1.16
SNHG1-207ENST00000537965 AVPP01185 164 aa7.82□□□□□ -1.16
SNHG1-207ENST00000537965 SMPD1P17405 629 aa7.82□□□□□ -1.16
SNHG1-207ENST00000537965 ARMC2Q8NEN0 867 aa7.82□□□□□ -1.16
SNHG1-207ENST00000537965 J3QL48 77 aa7.81□□□□□ -1.16
SNHG1-207ENST00000537965 RFC5P40937 340 aa7.81□□□□□ -1.16
SNHG1-207ENST00000537965 PRAM1Q96QH2 718 aa7.81□□□□□ -1.16
SNHG1-207ENST00000537965 DLC1Q96QB1 1528 aa7.81□□□□□ -1.16
SNHG1-207ENST00000537965 ITSN1Q15811 1721 aa7.81□□□□□ -1.16
SNHG1-207ENST00000537965 NRAPQ86VF7 1730 aa7.81□□□□□ -1.16
SNHG1-207ENST00000537965 ALS2Q96Q42 1657 aa7.8□□□□□ -1.16
SNHG1-207ENST00000537965 VARSP26640 1264 aaKnown RBP7.8□□□□□ -1.16
SNHG1-207ENST00000537965 SAFB2Q14151 953 aaKnown RBP eCLIP7.8□□□□□ -1.16
SNHG1-207ENST00000537965 CFAP70Q5T0N1 1121 aa7.8□□□□□ -1.16
SNHG1-207ENST00000537965 PMFBP1Q8TBY8 1022 aa7.8□□□□□ -1.16
SNHG1-207ENST00000537965 LRRN4Q8WUT4 740 aa7.8□□□□□ -1.16
SNHG1-207ENST00000537965 BTG4Q9NY30 223 aa7.8□□□□□ -1.16
SNHG1-207ENST00000537965 TRPM3Q9HCF6 1732 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-207ENST00000537965 ADGRB2O60241 1585 aa7.8□□□□□ -1.16
SNHG1-207ENST00000537965 AP1G2O75843 785 aa7.79□□□□□ -1.16
SNHG1-207ENST00000537965 CRIPAKQ8N1N5 446 aa7.79□□□□□ -1.16
SNHG1-207ENST00000537965 NGDNQ8NEJ9 315 aaKnown RBP7.79□□□□□ -1.16
SNHG1-207ENST00000537965 KAT6BQ8WYB5 2073 aa7.79□□□□□ -1.16
SNHG1-207ENST00000537965 ALDH1A1P00352 501 aa7.78□□□□□ -1.16
SNHG1-207ENST00000537965 FAM196AQ6ZSG2 479 aa7.78□□□□□ -1.16
SNHG1-207ENST00000537965 MPNDQ8N594 471 aa7.78□□□□□ -1.16
SNHG1-207ENST00000537965 FOXJ1Q92949 421 aa7.78□□□□□ -1.16
SNHG1-207ENST00000537965 AAASQ9NRG9 546 aa7.78□□□□□ -1.16
SNHG1-207ENST00000537965 SPATA31A5Q5VU36 1347 aa7.78□□□□□ -1.16
SNHG1-207ENST00000537965 SPATA31A7Q8IWB4 1347 aa7.78□□□□□ -1.16
SNHG1-207ENST00000537965 C11orf95C9JLR9 678 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-207ENST00000537965 WASLO00401 505 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-207ENST00000537965 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-207ENST00000537965 CTC1Q2NKJ3 1217 aa7.77□□□□□ -1.17
SNHG1-207ENST00000537965 TMEM259Q4ZIN3 620 aa7.77□□□□□ -1.17
SNHG1-207ENST00000537965 BPHLQ86WA6 291 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-207ENST00000537965 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.177e-32■■■□□ 17.2
SNHG1-207ENST00000537965 PRDM11Q9NQV5 511 aa7.77□□□□□ -1.17
SNHG1-207ENST00000537965 TRAK1Q9UPV9 953 aa7.77□□□□□ -1.17
SNHG1-207ENST00000537965 DISP2A7MBM2 1401 aa7.77□□□□□ -1.17
SNHG1-207ENST00000537965 PARD3Q8TEW0 1356 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 CRYBG1Q9Y4K1 1723 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 ST8SIA5O15466 376 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 USP17L8P0C7I0 530 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 NBPF14Q5TI25 921 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 FAM174AQ8TBP5 190 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 HPS1Q92902 700 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 TULP4Q9NRJ4 1543 aa7.76□□□□□ -1.17
SNHG1-207ENST00000537965 TNS1Q9HBL0 1735 aaKnown RBP7.75□□□□□ -1.17
SNHG1-207ENST00000537965 EVA1CP58658 441 aa7.75□□□□□ -1.17
SNHG1-207ENST00000537965 AGERQ15109 404 aa7.75□□□□□ -1.17
SNHG1-207ENST00000537965 NR6A1Q15406 480 aa7.75□□□□□ -1.17
SNHG1-207ENST00000537965 NBPF8Q3BBV2 869 aa7.75□□□□□ -1.17
SNHG1-207ENST00000537965 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
SNHG1-207ENST00000537965 SH3BP5LQ7L8J4 393 aa7.75□□□□□ -1.17
SNHG1-207ENST00000537965 SH3RF1Q7Z6J0 888 aa7.75□□□□□ -1.17
SNHG1-207ENST00000537965 HIRIP3Q9BW71 556 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-207ENST00000537965 FKBPLQ9UIM3 349 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms