RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 LINC00116Q8NCU8 138 aa14.79□□□□□ -0.04
SPARC-207ENST00000537849 ATP10DQ9P241 1426 aa14.79□□□□□ -0.04
SPARC-207ENST00000537849 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
SPARC-207ENST00000537849 RREB1Q92766 1687 aa14.78□□□□□ -0.04
SPARC-207ENST00000537849 KDM2BQ8NHM5 1336 aa14.78□□□□□ -0.04
SPARC-207ENST00000537849 RC3H1Q5TC82 1133 aaKnown RBP14.78□□□□□ -0.04
SPARC-207ENST00000537849 LINS1Q8NG48 757 aa14.78□□□□□ -0.04
SPARC-207ENST00000537849 TAF1LQ8IZX4 1826 aa14.77□□□□□ -0.05
SPARC-207ENST00000537849 IBTKQ9P2D0 1353 aaPredicted RBP14.76□□□□□ -0.05
SPARC-207ENST00000537849 ARFGEF2Q9Y6D5 1785 aa14.76□□□□□ -0.05
SPARC-207ENST00000537849 GNAI3P08754 354 aa14.76□□□□□ -0.05
SPARC-207ENST00000537849 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
SPARC-207ENST00000537849 SIRT2Q8IXJ6 389 aa14.76□□□□□ -0.05
SPARC-207ENST00000537849 PROM2Q8N271 834 aa14.76□□□□□ -0.05
SPARC-207ENST00000537849 MYD88Q99836 296 aa14.76□□□□□ -0.05
SPARC-207ENST00000537849 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
SPARC-207ENST00000537849 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
SPARC-207ENST00000537849 CCNL1Q9UK58 526 aaPredicted RBP14.76□□□□□ -0.05
SPARC-207ENST00000537849 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
SPARC-207ENST00000537849 CNTNAP4Q9C0A0 1308 aa14.75□□□□□ -0.05
SPARC-207ENST00000537849 NEURL1BA8MQ27 555 aa14.75□□□□□ -0.05
SPARC-207ENST00000537849 HDAC1Q13547 482 aaPredicted RBP14.75□□□□□ -0.05
SPARC-207ENST00000537849 UTYO14607 1347 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 MAP3K15Q6ZN16 1313 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 ERVV-1B6SEH8 477 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 PLSCR1O15162 318 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 NBPF7P0C2Y1 421 aaPredicted RBP14.74□□□□□ -0.05
SPARC-207ENST00000537849 NEXNQ0ZGT2 675 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 TRIM28Q13263 835 aaKnown RBP14.74□□□□□ -0.05
SPARC-207ENST00000537849 TCIRG1Q13488 830 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 CENPQQ7L2Z9 268 aaPredicted RBP14.74□□□□□ -0.05
SPARC-207ENST00000537849 ISCA1Q9BUE6 129 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
SPARC-207ENST00000537849 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
SPARC-207ENST00000537849 NUP98P52948 1817 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 ATP5J2-PTCD1G3V325 749 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 RPS6KA4O75676 772 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 GNAI2P04899 355 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 GCKRQ14397 625 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 HLFQ16534 295 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 GIGYF2Q6Y7W6 1299 aaKnown RBP14.73□□□□□ -0.05
SPARC-207ENST00000537849 KIF6Q6ZMV9 814 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 DZIP3Q86Y13 1208 aaKnown RBP14.73□□□□□ -0.05
SPARC-207ENST00000537849 RPAP2Q8IXW5 612 aaPredicted RBP14.73□□□□□ -0.05
SPARC-207ENST00000537849 ANKRD44Q8N8A2 993 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 TBC1D2BQ9UPU7 963 aa14.73□□□□□ -0.05
SPARC-207ENST00000537849 ZNF330Q9Y3S2 320 aaPredicted RBP14.73□□□□□ -0.05
SPARC-207ENST00000537849 AFDNP55196 1824 aaKnown RBP14.72□□□□□ -0.05
SPARC-207ENST00000537849 CEP85Q6P2H3 762 aa14.72□□□□□ -0.05
SPARC-207ENST00000537849 H7C1W4 665 aa14.71□□□□□ -0.05
SPARC-207ENST00000537849 GRM8O00222 908 aa14.71□□□□□ -0.05
SPARC-207ENST00000537849 APBA3O96018 575 aa14.71□□□□□ -0.05
SPARC-207ENST00000537849 UBTFL1P0CB47 393 aaPredicted RBP14.71□□□□□ -0.05
SPARC-207ENST00000537849 ATP8B2P98198 1209 aa14.71□□□□□ -0.05
SPARC-207ENST00000537849 ARXQ96QS3 562 aa14.71□□□□□ -0.05
SPARC-207ENST00000537849 C9orf78Q9NZ63 289 aaPredicted RBP14.71□□□□□ -0.05
SPARC-207ENST00000537849 LRRFIP2Q9Y608 721 aaKnown RBP14.71□□□□□ -0.05
SPARC-207ENST00000537849 A0A087WZG4 1122 aa14.7□□□□□ -0.06
SPARC-207ENST00000537849 CAMTA2O94983 1202 aa14.7□□□□□ -0.06
SPARC-207ENST00000537849 CASP7P55210 303 aa14.7□□□□□ -0.06
SPARC-207ENST00000537849 TXNRD1Q16881 649 aa14.7□□□□□ -0.06
SPARC-207ENST00000537849 SMIM5Q71RC9 77 aa14.7□□□□□ -0.06
SPARC-207ENST00000537849 CCDC191Q8NCU4 936 aa14.7□□□□□ -0.06
SPARC-207ENST00000537849 KAZALD1Q96I82 304 aa14.7□□□□□ -0.06
SPARC-207ENST00000537849 EP400Q96L91 3159 aa14.69□□□□□ -0.06
SPARC-207ENST00000537849 NPM2Q86SE8 214 aaKnown RBP14.69□□□□□ -0.06
SPARC-207ENST00000537849 AMIGO3Q86WK7 504 aa14.69□□□□□ -0.06
SPARC-207ENST00000537849 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
SPARC-207ENST00000537849 ZNF34Q8IZ26 560 aa14.69□□□□□ -0.06
SPARC-207ENST00000537849 CWC25Q9NXE8 425 aaPredicted RBP14.69□□□□□ -0.06
SPARC-207ENST00000537849 HSP90AB3PQ58FF7 597 aa14.68□□□□□ -0.06
SPARC-207ENST00000537849 JARID2Q92833 1246 aaPredicted RBP14.68□□□□□ -0.06
SPARC-207ENST00000537849 SUCLG2Q96I99 432 aa14.68□□□□□ -0.06
SPARC-207ENST00000537849 DCTPP1Q9H773 170 aa14.68□□□□□ -0.06
SPARC-207ENST00000537849 HDAC5Q9UQL6 1122 aa14.68□□□□□ -0.06
SPARC-207ENST00000537849 C4BP0C0L5 1744 aa14.68□□□□□ -0.06
SPARC-207ENST00000537849 COL15A1P39059 1388 aa14.68□□□□□ -0.06
SPARC-207ENST00000537849 TNS1Q9HBL0 1735 aaKnown RBP14.67□□□□□ -0.06
SPARC-207ENST00000537849 GNPATO15228 680 aa14.67□□□□□ -0.06
SPARC-207ENST00000537849 NLRP10Q86W26 655 aa14.67□□□□□ -0.06
SPARC-207ENST00000537849 ARHGEF1Q92888 912 aaKnown RBP14.67□□□□□ -0.06
SPARC-207ENST00000537849 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
SPARC-207ENST00000537849 ANKRD36CQ5JPF3 1778 aa14.67□□□□□ -0.06
SPARC-207ENST00000537849 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 RGL2O15211 777 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 HMGB2P26583 209 aaKnown RBP14.66□□□□□ -0.06
SPARC-207ENST00000537849 MTX1Q13505 466 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 EPHA10Q5JZY3 1008 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 CLEC4GQ6UXB4 293 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 SSH3Q8TE77 659 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 BCL2L12Q9HB09 334 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 NARFQ9UHQ1 456 aa14.66□□□□□ -0.06
SPARC-207ENST00000537849 POLA2Q14181 598 aa14.65□□□□□ -0.06
SPARC-207ENST00000537849 UBE3BQ7Z3V4 1068 aa14.65□□□□□ -0.06
SPARC-207ENST00000537849 PPP1R42Q7Z4L9 355 aa14.65□□□□□ -0.06
SPARC-207ENST00000537849 PDZRN3Q9UPQ7 1066 aa14.65□□□□□ -0.06
SPARC-207ENST00000537849 UBR3Q6ZT12 1888 aa14.65□□□□□ -0.06
SPARC-207ENST00000537849 HMMRO75330 724 aa14.64□□□□□ -0.07
SPARC-207ENST00000537849 PCCAP05165 728 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms