RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
SMAD3-203ENST00000537194 CACNA1SQ13698 1873 aa11.89□□□□□ -0.51
SMAD3-203ENST00000537194 LTBP3Q9NS15 1303 aa11.88□□□□□ -0.51
SMAD3-203ENST00000537194 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
SMAD3-203ENST00000537194 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
SMAD3-203ENST00000537194 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
SMAD3-203ENST00000537194 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
SMAD3-203ENST00000537194 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
SMAD3-203ENST00000537194 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
SMAD3-203ENST00000537194 FER1L6Q2WGJ9 1857 aa11.88□□□□□ -0.51
SMAD3-203ENST00000537194 ANKRD31Q8N7Z5 1873 aa11.88□□□□□ -0.51
SMAD3-203ENST00000537194 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-203ENST00000537194 RGL2O15211 777 aa11.87□□□□□ -0.51
SMAD3-203ENST00000537194 SRGNP10124 158 aa11.87□□□□□ -0.51
SMAD3-203ENST00000537194 NPR1P16066 1061 aa11.87□□□□□ -0.51
SMAD3-203ENST00000537194 CCDC93Q567U6 631 aa11.87□□□□□ -0.51
SMAD3-203ENST00000537194 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
SMAD3-203ENST00000537194 USP16Q9Y5T5 823 aa11.87□□□□□ -0.51
SMAD3-203ENST00000537194 CHADLQ6NUI6 762 aa11.86□□□□□ -0.51
SMAD3-203ENST00000537194 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
SMAD3-203ENST00000537194 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
SMAD3-203ENST00000537194 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
SMAD3-203ENST00000537194 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD3-203ENST00000537194 SLX4Q8IY92 1834 aa11.86□□□□□ -0.51
SMAD3-203ENST00000537194 KCNQ3O43525 872 aa11.85□□□□□ -0.51
SMAD3-203ENST00000537194 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
SMAD3-203ENST00000537194 PRELPP51888 382 aa11.85□□□□□ -0.51
SMAD3-203ENST00000537194 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-203ENST00000537194 MCM10Q7L590 875 aa11.85□□□□□ -0.51
SMAD3-203ENST00000537194 RTKN2Q8IZC4 609 aa11.85□□□□□ -0.51
SMAD3-203ENST00000537194 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
SMAD3-203ENST00000537194 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
SMAD3-203ENST00000537194 COL11A2P13942 1736 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-203ENST00000537194 PIP4K2AP48426 406 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-203ENST00000537194 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-203ENST00000537194 CREBZFQ9NS37 354 aa11.84□□□□□ -0.51
SMAD3-203ENST00000537194 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
SMAD3-203ENST00000537194 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
SMAD3-203ENST00000537194 DDNO94850 711 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-203ENST00000537194 HSPA1AP0DMV8 641 aaKnown RBP11.83□□□□□ -0.52
SMAD3-203ENST00000537194 HSPA1BP0DMV9 641 aaKnown RBP11.83□□□□□ -0.52
SMAD3-203ENST00000537194 PPP2R1AP30153 589 aa11.83□□□□□ -0.52
SMAD3-203ENST00000537194 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMAD3-203ENST00000537194 COL13A1Q5TAT6 717 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-203ENST00000537194 KIF6Q6ZMV9 814 aa11.83□□□□□ -0.52
SMAD3-203ENST00000537194 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
SMAD3-203ENST00000537194 SCN4AP35499 1836 aa11.83□□□□□ -0.52
SMAD3-203ENST00000537194 POTECB2RU33 542 aa11.82□□□□□ -0.52
SMAD3-203ENST00000537194 LDHDQ86WU2 507 aa11.82□□□□□ -0.52
SMAD3-203ENST00000537194 JDP2Q8WYK2 163 aa11.82□□□□□ -0.52
SMAD3-203ENST00000537194 CAPN15O75808 1086 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 DCTN1Q14203 1278 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 GRIPAP1Q4V328 841 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 EAPPQ56P03 285 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-203ENST00000537194 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 PNMA8AQ86V59 439 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-203ENST00000537194 NGEFQ8N5V2 710 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 RPGRQ92834 1020 aaKnown RBP11.81□□□□□ -0.52
SMAD3-203ENST00000537194 AIDAQ96BJ3 306 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 HACL1Q9UJ83 578 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 MAPK8IP3Q9UPT6 1336 aa11.81□□□□□ -0.52
SMAD3-203ENST00000537194 PRAMEF22A3QJZ6 481 aa11.8□□□□□ -0.52
SMAD3-203ENST00000537194 ERVV-1B6SEH8 477 aa11.8□□□□□ -0.52
SMAD3-203ENST00000537194 L3MBTL3Q96JM7 780 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-203ENST00000537194 ZNF277Q9NRM2 450 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-203ENST00000537194 KLRG2A4D1S0 409 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-203ENST00000537194 LMOD1P29536 600 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-203ENST00000537194 IARSP41252 1262 aaKnown RBP11.79□□□□□ -0.52
SMAD3-203ENST00000537194 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
SMAD3-203ENST00000537194 TAF1DQ9H5J8 278 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-203ENST00000537194 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
SMAD3-203ENST00000537194 RRP7AQ9Y3A4 280 aaKnown RBP11.79□□□□□ -0.52
SMAD3-203ENST00000537194 TMEM88BA6NKF7 163 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 NBPF10Q6P3W6 841 aaKnown RBP11.78□□□□□ -0.52
SMAD3-203ENST00000537194 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 C7orf43Q8WVR3 580 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
SMAD3-203ENST00000537194 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 NUP98P52948 1817 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 MAP3K15Q6ZN16 1313 aa11.78□□□□□ -0.52
SMAD3-203ENST00000537194 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.52
SMAD3-203ENST00000537194 EPHX2P34913 555 aa11.77□□□□□ -0.53
SMAD3-203ENST00000537194 HLFQ16534 295 aa11.77□□□□□ -0.53
SMAD3-203ENST00000537194 GPC2Q8N158 579 aa11.77□□□□□ -0.53
SMAD3-203ENST00000537194 PSMD1Q99460 953 aa11.77□□□□□ -0.53
SMAD3-203ENST00000537194 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
SMAD3-203ENST00000537194 MYL6BP14649 208 aa11.76□□□□□ -0.53
SMAD3-203ENST00000537194 NFE2L2Q16236 605 aa11.76□□□□□ -0.53
SMAD3-203ENST00000537194 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
SMAD3-203ENST00000537194 CNTNAP1P78357 1384 aa11.76□□□□□ -0.53
SMAD3-203ENST00000537194 FZD9O00144 591 aa11.75□□□□□ -0.53
SMAD3-203ENST00000537194 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
SMAD3-203ENST00000537194 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
SMAD3-203ENST00000537194 GPTP24298 496 aa11.75□□□□□ -0.53
SMAD3-203ENST00000537194 CTCFP49711 727 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-203ENST00000537194 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
SMAD3-203ENST00000537194 PARP10Q53GL7 1025 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms