RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 AIMP1Q12904 312 aaKnown RBP15.52■□□□□ 0.08
CHD4-203ENST00000535717 LRP5O75197 1615 aa15.52■□□□□ 0.08
CHD4-203ENST00000535717 BCORQ6W2J9 1755 aa15.52■□□□□ 0.07
CHD4-203ENST00000535717 MAP3K15Q6ZN16 1313 aa15.51■□□□□ 0.07
CHD4-203ENST00000535717 MMP10P09238 476 aa15.51■□□□□ 0.07
CHD4-203ENST00000535717 POLD1P28340 1107 aa15.51■□□□□ 0.07
CHD4-203ENST00000535717 HLFQ16534 295 aa15.51■□□□□ 0.07
CHD4-203ENST00000535717 KIF6Q6ZMV9 814 aa15.51■□□□□ 0.07
CHD4-203ENST00000535717 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
CHD4-203ENST00000535717 PHAXQ9H814 394 aaKnown RBP15.51■□□□□ 0.07
CHD4-203ENST00000535717 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
CHD4-203ENST00000535717 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
CHD4-203ENST00000535717 TM4SF1P30408 202 aa15.5■□□□□ 0.07
CHD4-203ENST00000535717 NFIXQ14938 502 aa15.5■□□□□ 0.07
CHD4-203ENST00000535717 TBC1D9BQ66K14 1250 aa15.5■□□□□ 0.07
CHD4-203ENST00000535717 CLEC4GQ6UXB4 293 aa15.5■□□□□ 0.07
CHD4-203ENST00000535717 ZBTB3Q9H5J0 574 aa15.5■□□□□ 0.07
CHD4-203ENST00000535717 RGL2O15211 777 aa15.49■□□□□ 0.07
CHD4-203ENST00000535717 DDR1Q08345 913 aa15.49■□□□□ 0.07
CHD4-203ENST00000535717 G2E3Q7L622 706 aa15.49■□□□□ 0.07
CHD4-203ENST00000535717 ZNF652Q9Y2D9 606 aa15.49■□□□□ 0.07
CHD4-203ENST00000535717 BICDL1Q6ZP65 573 aa15.48■□□□□ 0.07
CHD4-203ENST00000535717 YTHDC1Q96MU7 727 aaKnown RBP15.48■□□□□ 0.07
CHD4-203ENST00000535717 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
CHD4-203ENST00000535717 CT47B1P0C2W7 299 aaPredicted RBP15.47■□□□□ 0.07
CHD4-203ENST00000535717 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
CHD4-203ENST00000535717 ANKRD13DQ6ZTN6 518 aa15.47■□□□□ 0.07
CHD4-203ENST00000535717 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
CHD4-203ENST00000535717 PPP1R1BQ9UD71 204 aaPredicted RBP15.47■□□□□ 0.07
CHD4-203ENST00000535717 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
CHD4-203ENST00000535717 NUP98P52948 1817 aa15.47■□□□□ 0.07
CHD4-203ENST00000535717 SSH1Q8WYL5 1049 aa15.46■□□□□ 0.07
CHD4-203ENST00000535717 ZNF428Q96B54 188 aa15.46■□□□□ 0.07
CHD4-203ENST00000535717 CACNA1FO60840 1977 aa15.45■□□□□ 0.06
CHD4-203ENST00000535717 ATP10DQ9P241 1426 aa15.45■□□□□ 0.06
CHD4-203ENST00000535717 FLIIQ13045 1269 aa15.45■□□□□ 0.06
CHD4-203ENST00000535717 SETDB2Q96T68 719 aa15.45■□□□□ 0.06
CHD4-203ENST00000535717 NIP7Q9Y221 180 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHD4-203ENST00000535717 SERPINB2P05120 415 aa15.44■□□□□ 0.06
CHD4-203ENST00000535717 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
CHD4-203ENST00000535717 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
CHD4-203ENST00000535717 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
CHD4-203ENST00000535717 CARMIL3Q8ND23 1372 aa15.44■□□□□ 0.06
CHD4-203ENST00000535717 DDX58O95786 925 aaKnown RBP15.43■□□□□ 0.06
CHD4-203ENST00000535717 GPTP24298 496 aa15.43■□□□□ 0.06
CHD4-203ENST00000535717 TCIRG1Q13488 830 aa15.43■□□□□ 0.06
CHD4-203ENST00000535717 RIC3Q7Z5B4 369 aa15.43■□□□□ 0.06
CHD4-203ENST00000535717 BCL2L13Q9BXK5 485 aa15.43■□□□□ 0.06
CHD4-203ENST00000535717 ADCY9O60503 1353 aa15.43■□□□□ 0.06
CHD4-203ENST00000535717 ARFGEF2Q9Y6D5 1785 aa15.43■□□□□ 0.06
CHD4-203ENST00000535717 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
CHD4-203ENST00000535717 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
CHD4-203ENST00000535717 PI4KAP2A4QPH2 592 aa15.42■□□□□ 0.06
CHD4-203ENST00000535717 RARSP54136 660 aaKnown RBP15.42■□□□□ 0.06
CHD4-203ENST00000535717 FKBP5Q13451 457 aaPredicted RBP15.42■□□□□ 0.06
CHD4-203ENST00000535717 HSP90AB3PQ58FF7 597 aa15.42■□□□□ 0.06
CHD4-203ENST00000535717 KSR2Q6VAB6 950 aa15.42■□□□□ 0.06
CHD4-203ENST00000535717 PI4KAP1Q8N8J0 262 aa15.42■□□□□ 0.06
CHD4-203ENST00000535717 FHDC1Q9C0D6 1143 aaPredicted RBP15.42■□□□□ 0.06
CHD4-203ENST00000535717 SMC4Q9NTJ3 1288 aa15.42■□□□□ 0.06
CHD4-203ENST00000535717 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
CHD4-203ENST00000535717 NRXN2Q9P2S2 1712 aa15.42■□□□□ 0.06
CHD4-203ENST00000535717 FAM177BA6PVY3 158 aa15.41■□□□□ 0.06
CHD4-203ENST00000535717 NBPF5PQ86XG9 351 aaPredicted RBP15.41■□□□□ 0.06
CHD4-203ENST00000535717 KLHL34Q8N239 644 aa15.41■□□□□ 0.06
CHD4-203ENST00000535717 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
CHD4-203ENST00000535717 C10orf71Q711Q0 1435 aa15.41■□□□□ 0.06
CHD4-203ENST00000535717 ATP5J2-PTCD1G3V325 749 aa15.4■□□□□ 0.06
CHD4-203ENST00000535717 SUSD4Q5VX71 490 aa15.4■□□□□ 0.06
CHD4-203ENST00000535717 PRR5LQ6MZQ0 368 aa15.4■□□□□ 0.06
CHD4-203ENST00000535717 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
CHD4-203ENST00000535717 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
CHD4-203ENST00000535717 METTL22Q9BUU2 404 aaPredicted RBP15.4■□□□□ 0.06
CHD4-203ENST00000535717 CD2APQ9Y5K6 639 aa15.4■□□□□ 0.06
CHD4-203ENST00000535717 PARP10Q53GL7 1025 aa15.39■□□□□ 0.05
CHD4-203ENST00000535717 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
CHD4-203ENST00000535717 CNBD1Q8NA66 436 aa15.39■□□□□ 0.05
CHD4-203ENST00000535717 MYD88Q99836 296 aa15.39■□□□□ 0.05
CHD4-203ENST00000535717 SYT17Q9BSW7 474 aa15.39■□□□□ 0.05
CHD4-203ENST00000535717 F6X3S4 739 aa15.38■□□□□ 0.05
CHD4-203ENST00000535717 NTSR2O95665 410 aa15.38■□□□□ 0.05
CHD4-203ENST00000535717 BRPF1P55201 1214 aaPredicted RBP15.38■□□□□ 0.05
CHD4-203ENST00000535717 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
CHD4-203ENST00000535717 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
CHD4-203ENST00000535717 NLGN2Q8NFZ4 835 aa15.38■□□□□ 0.05
CHD4-203ENST00000535717 DNAAF4Q8WXU2 420 aa15.38■□□□□ 0.05
CHD4-203ENST00000535717 KIF13BQ9NQT8 1826 aa15.38■□□□□ 0.05
CHD4-203ENST00000535717 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
CHD4-203ENST00000535717 NPHP1O15259 732 aa15.37■□□□□ 0.05
CHD4-203ENST00000535717 BCAR3O75815 825 aa15.37■□□□□ 0.05
CHD4-203ENST00000535717 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
CHD4-203ENST00000535717 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
CHD4-203ENST00000535717 NUTM1Q86Y26 1132 aa15.37■□□□□ 0.05
CHD4-203ENST00000535717 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
CHD4-203ENST00000535717 NYXQ9GZU5 481 aa15.37■□□□□ 0.05
CHD4-203ENST00000535717 PTPRCP08575 1304 aa15.37■□□□□ 0.05
CHD4-203ENST00000535717 ST5P78524 1137 aa15.36■□□□□ 0.05
CHD4-203ENST00000535717 ERFEQ4G0M1 354 aa15.36■□□□□ 0.05
CHD4-203ENST00000535717 NOB1Q9ULX3 412 aaKnown RBP15.36■□□□□ 0.05
CHD4-203ENST00000535717 GTF2E1P29083 439 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms