RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 G2E3Q7L622 706 aa16.89■□□□□ 0.29
TMEM258-202ENST00000535042 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
TMEM258-202ENST00000535042 MAP3K15Q6ZN16 1313 aa16.89■□□□□ 0.29
TMEM258-202ENST00000535042 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
TMEM258-202ENST00000535042 MMP10P09238 476 aa16.88■□□□□ 0.29
TMEM258-202ENST00000535042 TM4SF1P30408 202 aa16.88■□□□□ 0.29
TMEM258-202ENST00000535042 NFIXQ14938 502 aa16.88■□□□□ 0.29
TMEM258-202ENST00000535042 TBC1D9BQ66K14 1250 aa16.88■□□□□ 0.29
TMEM258-202ENST00000535042 STK31Q9BXU1 1019 aa16.88■□□□□ 0.29
TMEM258-202ENST00000535042 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
TMEM258-202ENST00000535042 ERVV-1B6SEH8 477 aa16.87■□□□□ 0.29
TMEM258-202ENST00000535042 DDR1Q08345 913 aa16.87■□□□□ 0.29
TMEM258-202ENST00000535042 KIF6Q6ZMV9 814 aa16.87■□□□□ 0.29
TMEM258-202ENST00000535042 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
TMEM258-202ENST00000535042 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
TMEM258-202ENST00000535042 BICDL1Q6ZP65 573 aa16.86■□□□□ 0.29
TMEM258-202ENST00000535042 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
TMEM258-202ENST00000535042 POLD1P28340 1107 aa16.85■□□□□ 0.29
TMEM258-202ENST00000535042 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
TMEM258-202ENST00000535042 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
TMEM258-202ENST00000535042 RGL2O15211 777 aa16.84■□□□□ 0.29
TMEM258-202ENST00000535042 CT47B1P0C2W7 299 aaPredicted RBP16.84■□□□□ 0.29
TMEM258-202ENST00000535042 GIGYF2Q6Y7W6 1299 aaKnown RBP16.84■□□□□ 0.29
TMEM258-202ENST00000535042 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
TMEM258-202ENST00000535042 MRPL50Q8N5N7 158 aaKnown RBP16.84■□□□□ 0.29
TMEM258-202ENST00000535042 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
TMEM258-202ENST00000535042 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
TMEM258-202ENST00000535042 FLIIQ13045 1269 aa16.83■□□□□ 0.28
TMEM258-202ENST00000535042 BCL2L13Q9BXK5 485 aa16.83■□□□□ 0.28
TMEM258-202ENST00000535042 ZNF652Q9Y2D9 606 aa16.83■□□□□ 0.28
TMEM258-202ENST00000535042 LRP5O75197 1615 aa16.82■□□□□ 0.28
TMEM258-202ENST00000535042 ZNF428Q96B54 188 aa16.82■□□□□ 0.28
TMEM258-202ENST00000535042 NIP7Q9Y221 180 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMEM258-202ENST00000535042 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
TMEM258-202ENST00000535042 SERPINB2P05120 415 aa16.81■□□□□ 0.28
TMEM258-202ENST00000535042 GPTP24298 496 aa16.81■□□□□ 0.28
TMEM258-202ENST00000535042 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
TMEM258-202ENST00000535042 ALDH1L2Q3SY69 923 aa16.81■□□□□ 0.28
TMEM258-202ENST00000535042 RIC3Q7Z5B4 369 aa16.81■□□□□ 0.28
TMEM258-202ENST00000535042 ZNF34Q8IZ26 560 aa16.81■□□□□ 0.28
TMEM258-202ENST00000535042 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
TMEM258-202ENST00000535042 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
TMEM258-202ENST00000535042 ADCY9O60503 1353 aa16.8■□□□□ 0.28
TMEM258-202ENST00000535042 UBN2Q6ZU65 1347 aa16.8■□□□□ 0.28
TMEM258-202ENST00000535042 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
TMEM258-202ENST00000535042 TCIRG1Q13488 830 aa16.8■□□□□ 0.28
TMEM258-202ENST00000535042 KSR2Q6VAB6 950 aa16.8■□□□□ 0.28
TMEM258-202ENST00000535042 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
TMEM258-202ENST00000535042 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
TMEM258-202ENST00000535042 FKBP5Q13451 457 aaPredicted RBP16.79■□□□□ 0.28
TMEM258-202ENST00000535042 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
TMEM258-202ENST00000535042 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
TMEM258-202ENST00000535042 MAP3K2Q9Y2U5 619 aa16.79■□□□□ 0.28
TMEM258-202ENST00000535042 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
TMEM258-202ENST00000535042 FAM177BA6PVY3 158 aa16.78■□□□□ 0.28
TMEM258-202ENST00000535042 ATP5J2-PTCD1G3V325 749 aa16.78■□□□□ 0.28
TMEM258-202ENST00000535042 HSP90AB3PQ58FF7 597 aa16.78■□□□□ 0.28
TMEM258-202ENST00000535042 SUSD4Q5VX71 490 aa16.78■□□□□ 0.28
TMEM258-202ENST00000535042 CCDC24Q8N4L8 307 aa16.78■□□□□ 0.28
TMEM258-202ENST00000535042 ISCA1Q9BUE6 129 aa16.78■□□□□ 0.28
TMEM258-202ENST00000535042 METTL22Q9BUU2 404 aaPredicted RBP16.78■□□□□ 0.28
TMEM258-202ENST00000535042 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
TMEM258-202ENST00000535042 F6X3S4 739 aa16.77■□□□□ 0.28
TMEM258-202ENST00000535042 BCAR3O75815 825 aa16.77■□□□□ 0.28
TMEM258-202ENST00000535042 PRR5LQ6MZQ0 368 aa16.77■□□□□ 0.28
TMEM258-202ENST00000535042 NLRP10Q86W26 655 aa16.77■□□□□ 0.28
TMEM258-202ENST00000535042 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
TMEM258-202ENST00000535042 MYD88Q99836 296 aa16.77■□□□□ 0.28
TMEM258-202ENST00000535042 NUP98P52948 1817 aa16.76■□□□□ 0.27
TMEM258-202ENST00000535042 BRPF1P55201 1214 aaPredicted RBP16.76■□□□□ 0.27
TMEM258-202ENST00000535042 NTSR2O95665 410 aa16.75■□□□□ 0.27
TMEM258-202ENST00000535042 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
TMEM258-202ENST00000535042 PARP10Q53GL7 1025 aa16.75■□□□□ 0.27
TMEM258-202ENST00000535042 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
TMEM258-202ENST00000535042 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
TMEM258-202ENST00000535042 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
TMEM258-202ENST00000535042 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
TMEM258-202ENST00000535042 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
TMEM258-202ENST00000535042 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
TMEM258-202ENST00000535042 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
TMEM258-202ENST00000535042 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
TMEM258-202ENST00000535042 NLGN2Q8NFZ4 835 aa16.74■□□□□ 0.27
TMEM258-202ENST00000535042 SYT17Q9BSW7 474 aa16.74■□□□□ 0.27
TMEM258-202ENST00000535042 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
TMEM258-202ENST00000535042 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
TMEM258-202ENST00000535042 CWF19L2Q2TBE0 894 aaKnown RBP16.73■□□□□ 0.27
TMEM258-202ENST00000535042 TPTE2Q6XPS3 522 aa16.73■□□□□ 0.27
TMEM258-202ENST00000535042 SYNE4Q8N205 404 aa16.73■□□□□ 0.27
TMEM258-202ENST00000535042 PTPRCP08575 1304 aa16.72■□□□□ 0.27
TMEM258-202ENST00000535042 ERFEQ4G0M1 354 aa16.72■□□□□ 0.27
TMEM258-202ENST00000535042 PPP1R42Q7Z4L9 355 aa16.72■□□□□ 0.27
TMEM258-202ENST00000535042 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
TMEM258-202ENST00000535042 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
TMEM258-202ENST00000535042 IBTKQ9P2D0 1353 aaPredicted RBP16.72■□□□□ 0.27
TMEM258-202ENST00000535042 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
TMEM258-202ENST00000535042 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
TMEM258-202ENST00000535042 BEND3Q5T5X7 828 aa16.71■□□□□ 0.27
TMEM258-202ENST00000535042 NYXQ9GZU5 481 aa16.71■□□□□ 0.27
TMEM258-202ENST00000535042 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
TMEM258-202ENST00000535042 ANKRD36CQ5JPF3 1778 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms