RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FAM84AQ96KN4 292 aa2.69□□□□□ -1.98
COPB1-212ENST00000534771 ADARB2-AS1A8MUL3 147 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 KHNYNO15037 678 aaKnown RBP2.68□□□□□ -1.98
COPB1-212ENST00000534771 LILRB3O75022 631 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 LILRB5O75023 590 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 ALX3O95076 343 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 HOXA10P31260 410 aaPredicted RBP2.68□□□□□ -1.98
COPB1-212ENST00000534771 MESP2Q0VG99 397 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 NFIAQ12857 509 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 QPCTQ16769 361 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 PDXDC2PQ6P474 469 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 C20orf204Q6ZNR8 217 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 VSIG10Q8N0Z9 540 aa2.68□□□□□ -1.98
COPB1-212ENST00000534771 RTL5Q5HYW3 569 aaPredicted RBP2.67□□□□□ -1.98
COPB1-212ENST00000534771 PRRT2Q7Z6L0 340 aaPredicted RBP2.67□□□□□ -1.98
COPB1-212ENST00000534771 ANKLE2Q86XL3 938 aa2.67□□□□□ -1.98
COPB1-212ENST00000534771 PARP9Q8IXQ6 854 aa2.67□□□□□ -1.98
COPB1-212ENST00000534771 ZC3H15Q8WU90 426 aaKnown RBP2.67□□□□□ -1.98
COPB1-212ENST00000534771 FBXL18Q96ME1 805 aa2.67□□□□□ -1.98
COPB1-212ENST00000534771 ARHGAP9Q9BRR9 750 aa2.67□□□□□ -1.98
COPB1-212ENST00000534771 DNAAF2Q9NVR5 837 aaKnown RBP2.67□□□□□ -1.98
COPB1-212ENST00000534771 CCDC39Q9UFE4 941 aa2.67□□□□□ -1.98
COPB1-212ENST00000534771 LIMD1Q9UGP4 676 aa2.67□□□□□ -1.98
COPB1-212ENST00000534771 MEGF11A6BM72 1044 aa2.66□□□□□ -1.98
COPB1-212ENST00000534771 TRIM66O15016 1216 aa2.66□□□□□ -1.98
COPB1-212ENST00000534771 PTK2Q05397 1052 aa2.66□□□□□ -1.98
COPB1-212ENST00000534771 MYSM1Q5VVJ2 828 aa2.66□□□□□ -1.98
COPB1-212ENST00000534771 BHLHE22Q8NFJ8 381 aaPredicted RBP2.66□□□□□ -1.98
COPB1-212ENST00000534771 FKBPLQ9UIM3 349 aa2.66□□□□□ -1.98
COPB1-212ENST00000534771 BIN1O00499 593 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 NFKB2Q00653 900 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 CTDSPL2Q05D32 466 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 CLN3Q13286 438 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 AK7Q96M32 723 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 RSPH6AQ9H0K4 717 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 CRISPLD1Q9H336 500 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 AKTIPQ9H8T0 292 aa2.65□□□□□ -1.99
COPB1-212ENST00000534771 AKAP8O43823 692 aaKnown RBP2.64□□□□□ -1.99
COPB1-212ENST00000534771 ZXDCQ2QGD7 858 aaPredicted RBP2.64□□□□□ -1.99
COPB1-212ENST00000534771 NBPF20Q3BBV1 942 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 IGF2-ASQ6U949 168 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 NFXL1Q6ZNB6 911 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 AMIGO3Q86WK7 504 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 ADAM32Q8TC27 787 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 BORCS6Q96GS4 357 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 STRN4Q9NRL3 753 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 POLR3EQ9NVU0 708 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 GPSM3Q9Y4H4 160 aa2.64□□□□□ -1.99
COPB1-212ENST00000534771 ZC3H4Q9UPT8 1303 aaKnown RBP2.64□□□□□ -1.99
COPB1-212ENST00000534771 SIN3BO75182 1162 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 SKIP12755 728 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 SYN1P17600 705 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 ADH7P40394 386 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 CLK2P49760 499 aaKnown RBP2.63□□□□□ -1.99
COPB1-212ENST00000534771 NR6A1Q15406 480 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 PPP2R2DQ66LE6 453 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 FBXO11Q86XK2 927 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 DZIP3Q86Y13 1208 aaKnown RBP2.63□□□□□ -1.99
COPB1-212ENST00000534771 SHKBP1Q8TBC3 707 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 LRRN4Q8WUT4 740 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 TMEM40Q8WWA1 233 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 FAM168AQ92567 244 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 MARK1Q9P0L2 795 aa2.63□□□□□ -1.99
COPB1-212ENST00000534771 CENPCQ03188 943 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 PDE4DQ08499 809 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 C4orf17Q53FE4 359 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 GNASQ5JWF2 1037 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 RNF43Q68DV7 783 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 NLRP8Q86W28 1048 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 TRIM42Q8IWZ5 723 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 NUDT8Q8WV74 236 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 DBNDD2Q9BQY9 259 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 OCSTAMPQ9BR26 566 aa2.62□□□□□ -1.99
COPB1-212ENST00000534771 JPH1Q9HDC5 661 aaPredicted RBP2.62□□□□□ -1.99
COPB1-212ENST00000534771 HMX2A2RU54 273 aa2.61□□□□□ -1.99
COPB1-212ENST00000534771 TMEM214Q6NUQ4 689 aaKnown RBP2.61□□□□□ -1.99
COPB1-212ENST00000534771 SEPT12Q8IYM1 358 aa2.61□□□□□ -1.99
COPB1-212ENST00000534771 PNMA1Q8ND90 353 aa2.61□□□□□ -1.99
COPB1-212ENST00000534771 NAF1Q96HR8 494 aaKnown RBP2.61□□□□□ -1.99
COPB1-212ENST00000534771 ZSCAN10Q96SZ4 725 aaPredicted RBP2.61□□□□□ -1.99
COPB1-212ENST00000534771 C7orf69Q9H7B7 122 aa2.61□□□□□ -1.99
COPB1-212ENST00000534771 ATP1B4Q9UN42 357 aaPredicted RBP2.61□□□□□ -1.99
COPB1-212ENST00000534771 ESPNB1AK53 854 aa2.6□□□□□ -1.99
COPB1-212ENST00000534771 WDR64B1ANS9 1081 aa2.6□□□□□ -1.99
COPB1-212ENST00000534771 DHX15O43143 795 aaKnown RBP2.6□□□□□ -1.99
COPB1-212ENST00000534771 TSPAN15O95858 294 aa2.6□□□□□ -1.99
COPB1-212ENST00000534771 GTF2E1P29083 439 aaPredicted RBP2.6□□□□□ -1.99
COPB1-212ENST00000534771 SKIV2LQ15477 1246 aaKnown RBP2.6□□□□□ -1.99
COPB1-212ENST00000534771 CCDC125Q86Z20 511 aa2.6□□□□□ -1.99
COPB1-212ENST00000534771 TNFRSF25Q93038 417 aa2.6□□□□□ -1.99
COPB1-212ENST00000534771 MENTQ9BUN1 341 aa2.6□□□□□ -1.99
COPB1-212ENST00000534771 ARHGEF10LQ9HCE6 1279 aa2.6□□□□□ -1.99
COPB1-212ENST00000534771 LRRC10BA6NIK2 292 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 AP1G2O75843 785 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 ADRB1P08588 477 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 GLB1P16278 677 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 TGM1P22735 817 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 AFF1P51825 1210 aaKnown RBP2.59□□□□□ -1.99
COPB1-212ENST00000534771 ILDR2Q71H61 639 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms