RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
COPB1-211ENST00000534234 MYBBP1AQ9BQG0 1328 aaKnown RBP11.73□□□□□ -0.53
COPB1-211ENST00000534234 SRGNP10124 158 aa11.73□□□□□ -0.53
COPB1-211ENST00000534234 PRELPP51888 382 aa11.73□□□□□ -0.53
COPB1-211ENST00000534234 HLFQ16534 295 aa11.73□□□□□ -0.53
COPB1-211ENST00000534234 CNKSR1Q969H4 720 aa11.73□□□□□ -0.53
COPB1-211ENST00000534234 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
COPB1-211ENST00000534234 NFKBIEO00221 500 aa11.72□□□□□ -0.53
COPB1-211ENST00000534234 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
COPB1-211ENST00000534234 STYK1Q6J9G0 422 aa11.72□□□□□ -0.53
COPB1-211ENST00000534234 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
COPB1-211ENST00000534234 MASTLQ96GX5 879 aa11.72□□□□□ -0.53
COPB1-211ENST00000534234 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
COPB1-211ENST00000534234 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
COPB1-211ENST00000534234 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
COPB1-211ENST00000534234 ERVV-1B6SEH8 477 aa11.71□□□□□ -0.53
COPB1-211ENST00000534234 MYL6BP14649 208 aa11.71□□□□□ -0.53
COPB1-211ENST00000534234 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.53
COPB1-211ENST00000534234 NEUROD2Q15784 382 aa11.71□□□□□ -0.53
COPB1-211ENST00000534234 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.54
COPB1-211ENST00000534234 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.54
COPB1-211ENST00000534234 PRPF40BQ6NWY9 871 aaKnown RBP11.71□□□□□ -0.54
COPB1-211ENST00000534234 TTLL7Q6ZT98 887 aa11.71□□□□□ -0.54
COPB1-211ENST00000534234 CCDC146Q8IYE0 955 aa11.71□□□□□ -0.54
COPB1-211ENST00000534234 BRCA1P38398 1863 aaKnown RBP11.7□□□□□ -0.54
COPB1-211ENST00000534234 KLRG2A4D1S0 409 aaPredicted RBP11.7□□□□□ -0.54
COPB1-211ENST00000534234 GLTPD2A6NH11 291 aa11.7□□□□□ -0.54
COPB1-211ENST00000534234 NPR1P16066 1061 aa11.7□□□□□ -0.54
COPB1-211ENST00000534234 EIF2S2P20042 333 aaKnown RBP11.7□□□□□ -0.54
COPB1-211ENST00000534234 WDR43Q15061 677 aaKnown RBP eCLIP11.7□□□□□ -0.54
COPB1-211ENST00000534234 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
COPB1-211ENST00000534234 RBM46Q8TBY0 533 aaKnown RBP11.7□□□□□ -0.54
COPB1-211ENST00000534234 BABAM1Q9NWV8 329 aa11.7□□□□□ -0.54
COPB1-211ENST00000534234 AFDNP55196 1824 aaKnown RBP11.7□□□□□ -0.54
COPB1-211ENST00000534234 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
COPB1-211ENST00000534234 SOGA3Q5TF21 947 aa11.69□□□□□ -0.54
COPB1-211ENST00000534234 DPY19L2Q6NUT2 758 aa11.69□□□□□ -0.54
COPB1-211ENST00000534234 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
COPB1-211ENST00000534234 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
COPB1-211ENST00000534234 ADAMTS8Q9UP79 889 aa11.69□□□□□ -0.54
COPB1-211ENST00000534234 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
COPB1-211ENST00000534234 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
COPB1-211ENST00000534234 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
COPB1-211ENST00000534234 APLP1P51693 650 aa11.68□□□□□ -0.54
COPB1-211ENST00000534234 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
COPB1-211ENST00000534234 NYXQ9GZU5 481 aa11.68□□□□□ -0.54
COPB1-211ENST00000534234 TAOK3Q9H2K8 898 aa11.68□□□□□ -0.54
COPB1-211ENST00000534234 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
COPB1-211ENST00000534234 ERBB4Q15303 1308 aa11.68□□□□□ -0.54
COPB1-211ENST00000534234 GPTP24298 496 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 ALDH1B1P30837 517 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 FSTL1Q12841 308 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 PDIA6Q15084 440 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
COPB1-211ENST00000534234 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
COPB1-211ENST00000534234 LAS1LQ9Y4W2 734 aaKnown RBP11.67□□□□□ -0.54
COPB1-211ENST00000534234 CHL1O00533 1208 aa11.66□□□□□ -0.54
COPB1-211ENST00000534234 ANXA1P04083 346 aa11.66□□□□□ -0.54
COPB1-211ENST00000534234 CCDC93Q567U6 631 aa11.66□□□□□ -0.54
COPB1-211ENST00000534234 SUSD4Q5VX71 490 aa11.66□□□□□ -0.54
COPB1-211ENST00000534234 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
COPB1-211ENST00000534234 PROSER3Q2NL68 480 aa11.65□□□□□ -0.54
COPB1-211ENST00000534234 LRP10Q7Z4F1 713 aa11.65□□□□□ -0.54
COPB1-211ENST00000534234 UBN2Q6ZU65 1347 aa11.65□□□□□ -0.55
COPB1-211ENST00000534234 POTECB2RU33 542 aa11.64□□□□□ -0.55
COPB1-211ENST00000534234 CRY2Q49AN0 593 aa11.64□□□□□ -0.55
COPB1-211ENST00000534234 OLFM4Q6UX06 510 aa11.64□□□□□ -0.55
COPB1-211ENST00000534234 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
COPB1-211ENST00000534234 PPP1R42Q7Z4L9 355 aa11.64□□□□□ -0.55
COPB1-211ENST00000534234 RTKN2Q8IZC4 609 aa11.64□□□□□ -0.55
COPB1-211ENST00000534234 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
COPB1-211ENST00000534234 FKBP4Q02790 459 aaKnown RBP eCLIP11.63□□□□□ -0.55
COPB1-211ENST00000534234 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
COPB1-211ENST00000534234 KRT24Q2M2I5 525 aa11.63□□□□□ -0.55
COPB1-211ENST00000534234 PARP10Q53GL7 1025 aa11.63□□□□□ -0.55
COPB1-211ENST00000534234 DNAJC5GQ8N7S2 189 aa11.63□□□□□ -0.55
COPB1-211ENST00000534234 RPGRQ92834 1020 aaKnown RBP11.63□□□□□ -0.55
COPB1-211ENST00000534234 ANKRD31Q8N7Z5 1873 aa11.63□□□□□ -0.55
COPB1-211ENST00000534234 DDNO94850 711 aaPredicted RBP11.62□□□□□ -0.55
COPB1-211ENST00000534234 NTSR2O95665 410 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 DDX21Q9NR30 783 aaKnown RBP eCLIP11.62□□□□□ -0.55
COPB1-211ENST00000534234 ZNF277Q9NRM2 450 aaPredicted RBP11.62□□□□□ -0.55
COPB1-211ENST00000534234 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 ABCC12Q96J65 1359 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 CEP350Q5VT06 3117 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 APAF1O14727 1248 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 HOXA10P31260 410 aaPredicted RBP11.62□□□□□ -0.55
COPB1-211ENST00000534234 NLRP3Q96P20 1036 aa11.62□□□□□ -0.55
COPB1-211ENST00000534234 UTP14AQ9BVJ6 771 aaKnown RBP11.62□□□□□ -0.55
COPB1-211ENST00000534234 DLG5Q8TDM6 1919 aa11.61□□□□□ -0.55
COPB1-211ENST00000534234 IBTKQ9P2D0 1353 aaPredicted RBP11.61□□□□□ -0.55
COPB1-211ENST00000534234 HTRA3P83110 453 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms