RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 RILPL2Q969X0 211 aa34.9■■■■□ 3.18
SAMD1-202ENST00000533683 PA2G4Q9UQ80 394 aaKnown RBP34.89■■■■□ 3.18
SAMD1-202ENST00000533683 PAPPAQ13219 1627 aa34.89■■■■□ 3.18
SAMD1-202ENST00000533683 KCPQ6ZWJ8 1503 aa34.89■■■■□ 3.18
SAMD1-202ENST00000533683 UNC5CLQ8IV45 518 aa34.89■■■■□ 3.18
SAMD1-202ENST00000533683 PI4K2BQ8TCG2 481 aa34.87■■■■□ 3.17
SAMD1-202ENST00000533683 ERBB4Q15303 1308 aa34.87■■■■□ 3.17
SAMD1-202ENST00000533683 NBPF26B4DH59 902 aa34.87■■■■□ 3.17
SAMD1-202ENST00000533683 DEKP35659 375 aaKnown RBP34.87■■■■□ 3.17
SAMD1-202ENST00000533683 NBPF14Q5TI25 921 aa34.87■■■■□ 3.17
SAMD1-202ENST00000533683 NBPF10Q6P3W6 841 aaKnown RBP34.87■■■■□ 3.17
SAMD1-202ENST00000533683 NBPF15Q8N660 670 aa34.87■■■■□ 3.17
SAMD1-202ENST00000533683 CHMLP26374 656 aa34.86■■■■□ 3.17
SAMD1-202ENST00000533683 ARFGEF2Q9Y6D5 1785 aa34.85■■■■□ 3.17
SAMD1-202ENST00000533683 ESYT1Q9BSJ8 1104 aa34.85■■■■□ 3.17
SAMD1-202ENST00000533683 PTCD1O75127 700 aaKnown RBP34.84■■■■□ 3.17
SAMD1-202ENST00000533683 RABEP1Q15276 862 aa34.84■■■■□ 3.17
SAMD1-202ENST00000533683 PLBD2Q8NHP8 589 aa34.84■■■■□ 3.17
SAMD1-202ENST00000533683 TOGARAM1Q9Y4F4 1720 aa34.84■■■■□ 3.17
SAMD1-202ENST00000533683 ERC1Q8IUD2 1116 aa34.83■■■■□ 3.17
SAMD1-202ENST00000533683 TNS2Q63HR2 1409 aa34.83■■■■□ 3.17
SAMD1-202ENST00000533683 COL14A1Q05707 1796 aaKnown RBP34.82■■■■□ 3.17
SAMD1-202ENST00000533683 AHDC1Q5TGY3 1603 aaPredicted RBP34.82■■■■□ 3.17
SAMD1-202ENST00000533683 CLASRPQ8N2M8 674 aaKnown RBP34.82■■■■□ 3.16
SAMD1-202ENST00000533683 USP42Q9H9J4 1324 aaKnown RBP34.82■■■■□ 3.16
SAMD1-202ENST00000533683 CHMP5Q9NZZ3 219 aa34.81■■■■□ 3.16
SAMD1-202ENST00000533683 AFDNP55196 1824 aaKnown RBP34.81■■■■□ 3.16
SAMD1-202ENST00000533683 K7ELQ4 463 aaPredicted RBP34.8■■■■□ 3.16
SAMD1-202ENST00000533683 EPHA10Q5JZY3 1008 aa34.8■■■■□ 3.16
SAMD1-202ENST00000533683 ATP5J2-PTCD1G3V325 749 aa34.79■■■■□ 3.16
SAMD1-202ENST00000533683 A1BGP04217 495 aa34.79■■■■□ 3.16
SAMD1-202ENST00000533683 TMOD3Q9NYL9 352 aa34.79■■■■□ 3.16
SAMD1-202ENST00000533683 TTC41PQ6P2S7 1318 aa34.78■■■■□ 3.16
SAMD1-202ENST00000533683 DDIT3P35638 169 aa34.78■■■■□ 3.16
SAMD1-202ENST00000533683 COL22A1Q8NFW1 1626 aaPredicted RBP34.78■■■■□ 3.16
SAMD1-202ENST00000533683 MAP4K4O95819 1239 aaPredicted RBP34.77■■■■□ 3.16
SAMD1-202ENST00000533683 JARID2Q92833 1246 aaPredicted RBP34.77■■■■□ 3.16
SAMD1-202ENST00000533683 AK9Q5TCS8 1911 aa34.77■■■■□ 3.16
SAMD1-202ENST00000533683 SASH1O94885 1247 aa34.76■■■■□ 3.16
SAMD1-202ENST00000533683 G3BP1Q13283 466 aaKnown RBP eCLIP34.76■■■■□ 3.165e-9■■■■□ 24.7
SAMD1-202ENST00000533683 TTLL7Q6ZT98 887 aa34.76■■■■□ 3.15
SAMD1-202ENST00000533683 COL16A1Q07092 1604 aaPredicted RBP34.75■■■■□ 3.15
SAMD1-202ENST00000533683 DISP2A7MBM2 1401 aa34.75■■■■□ 3.15
SAMD1-202ENST00000533683 UBE3BQ7Z3V4 1068 aa34.75■■■■□ 3.15
SAMD1-202ENST00000533683 A0A087WZG4 1122 aa34.73■■■■□ 3.15
SAMD1-202ENST00000533683 GLRX3O76003 335 aaKnown RBP34.73■■■■□ 3.15
SAMD1-202ENST00000533683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.73■■■■□ 3.15
SAMD1-202ENST00000533683 LTBP4Q8N2S1 1624 aa34.73■■■■□ 3.15
SAMD1-202ENST00000533683 COL15A1P39059 1388 aa34.73■■■■□ 3.15
SAMD1-202ENST00000533683 IFIT2P09913 472 aaKnown RBP34.73■■■■□ 3.15
SAMD1-202ENST00000533683 KLHDC4Q8TBB5 520 aa34.73■■■■□ 3.15
SAMD1-202ENST00000533683 CNTROBQ8N137 903 aa34.72■■■■□ 3.15
SAMD1-202ENST00000533683 PIGBQ92521 554 aa34.72■■■■□ 3.15
SAMD1-202ENST00000533683 SIL1Q9H173 461 aa34.72■■■■□ 3.15
SAMD1-202ENST00000533683 ECHDC1Q9NTX5 307 aa34.72■■■■□ 3.15
SAMD1-202ENST00000533683 AACSQ86V21 672 aa34.72■■■■□ 3.15
SAMD1-202ENST00000533683 CASP7P55210 303 aa34.71■■■■□ 3.15
SAMD1-202ENST00000533683 ANO2Q9NQ90 1003 aa34.71■■■■□ 3.15
SAMD1-202ENST00000533683 NUP188Q5SRE5 1749 aa34.71■■■■□ 3.15
SAMD1-202ENST00000533683 ASAP1Q9ULH1 1129 aa34.7■■■■□ 3.15
SAMD1-202ENST00000533683 RABL6Q3YEC7 729 aaPredicted RBP34.7■■■■□ 3.15
SAMD1-202ENST00000533683 IL25Q9H293 177 aa34.7■■■■□ 3.15
SAMD1-202ENST00000533683 HSP90AA1P07900 732 aaKnown RBP34.69■■■■□ 3.14
SAMD1-202ENST00000533683 EAF2Q96CJ1 260 aaPredicted RBP34.69■■■■□ 3.14
SAMD1-202ENST00000533683 GPATCH3Q96I76 525 aa34.69■■■■□ 3.14
SAMD1-202ENST00000533683 COPRSQ9NQ92 184 aa34.67■■■■□ 3.14
SAMD1-202ENST00000533683 RFX5P48382 616 aaPredicted RBP34.67■■■■□ 3.14
SAMD1-202ENST00000533683 ITGB4P16144 1822 aa34.66■■■■□ 3.14
SAMD1-202ENST00000533683 ZBTB3Q9H5J0 574 aa34.66■■■■□ 3.14
SAMD1-202ENST00000533683 ATG3Q9NT62 314 aa34.66■■■■□ 3.14
SAMD1-202ENST00000533683 FOXD4L1Q9NU39 408 aa34.66■■■■□ 3.14
SAMD1-202ENST00000533683 CIZ1Q9ULV3 898 aaPredicted RBP34.66■■■■□ 3.14
SAMD1-202ENST00000533683 H7C1W4 665 aa34.65■■■■□ 3.14
SAMD1-202ENST00000533683 PLCH1Q4KWH8 1693 aa34.65■■■■□ 3.14
SAMD1-202ENST00000533683 ST18O60284 1047 aa34.64■■■■□ 3.14
SAMD1-202ENST00000533683 MCCP23508 829 aa34.64■■■■□ 3.14
SAMD1-202ENST00000533683 PTPN12Q05209 780 aaKnown RBP34.64■■■■□ 3.14
SAMD1-202ENST00000533683 VSIG10Q8N0Z9 540 aa34.64■■■■□ 3.14
SAMD1-202ENST00000533683 CWC25Q9NXE8 425 aaPredicted RBP34.64■■■■□ 3.14
SAMD1-202ENST00000533683 CCDC8Q9H0W5 538 aaPredicted RBP34.63■■■■□ 3.13
SAMD1-202ENST00000533683 SGSM2O43147 1006 aa34.62■■■■□ 3.13
SAMD1-202ENST00000533683 DNAJC10Q8IXB1 793 aa34.62■■■■□ 3.13
SAMD1-202ENST00000533683 PALD1Q9ULE6 856 aa34.62■■■■□ 3.13
SAMD1-202ENST00000533683 EXOC5O00471 708 aa34.62■■■■□ 3.13
SAMD1-202ENST00000533683 EPB41L2O43491 1005 aaKnown RBP34.62■■■■□ 3.13
SAMD1-202ENST00000533683 TEX13AQ9BXU3 409 aaPredicted RBP34.62■■■■□ 3.13
SAMD1-202ENST00000533683 TLR7Q9NYK1 1049 aaKnown RBP34.61■■■■□ 3.13
SAMD1-202ENST00000533683 ANAPC15P60006 121 aa34.6■■■■□ 3.13
SAMD1-202ENST00000533683 FOXO4P98177 505 aa34.6■■■■□ 3.13
SAMD1-202ENST00000533683 TJP1Q07157 1748 aa34.59■■■■□ 3.13
SAMD1-202ENST00000533683 LMBR1LQ6UX01 489 aa34.59■■■■□ 3.13
SAMD1-202ENST00000533683 CCDC191Q8NCU4 936 aa34.59■■■■□ 3.13
SAMD1-202ENST00000533683 BCL9O00512 1426 aa34.59■■■■□ 3.13
SAMD1-202ENST00000533683 PHLPP1O60346 1717 aa34.58■■■■□ 3.13
SAMD1-202ENST00000533683 ADAMTS2O95450 1211 aa34.58■■■■□ 3.13
SAMD1-202ENST00000533683 MCM4P33991 863 aa34.58■■■■□ 3.13
SAMD1-202ENST00000533683 GSE1Q14687 1217 aa34.58■■■■□ 3.13
SAMD1-202ENST00000533683 IL17RAQ96F46 866 aa34.57■■■■□ 3.13
SAMD1-202ENST00000533683 LRP6O75581 1613 aa34.57■■■■□ 3.12
SAMD1-202ENST00000533683 WNK3Q9BYP7 1800 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms