RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 RPS6KA4O75676 772 aa13.02□□□□□ -0.32
CAPRIN1-215ENST00000533657 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.32
CAPRIN1-215ENST00000533657 KSR2Q6VAB6 950 aa13.02□□□□□ -0.32
CAPRIN1-215ENST00000533657 PROM2Q8N271 834 aa13.02□□□□□ -0.32
CAPRIN1-215ENST00000533657 BCL2L13Q9BXK5 485 aa13.02□□□□□ -0.32
CAPRIN1-215ENST00000533657 LRRC4BQ9NT99 713 aa13.02□□□□□ -0.32
CAPRIN1-215ENST00000533657 COL15A1P39059 1388 aa13.02□□□□□ -0.33
CAPRIN1-215ENST00000533657 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
CAPRIN1-215ENST00000533657 A1BGP04217 495 aa13.02□□□□□ -0.33
CAPRIN1-215ENST00000533657 PLBD2Q8NHP8 589 aa13.02□□□□□ -0.33
CAPRIN1-215ENST00000533657 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.33
CAPRIN1-215ENST00000533657 BAG6P46379 1132 aa13.01□□□□□ -0.33
CAPRIN1-215ENST00000533657 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-215ENST00000533657 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-215ENST00000533657 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
CAPRIN1-215ENST00000533657 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
CAPRIN1-215ENST00000533657 AKT1S1Q96B36 256 aa13□□□□□ -0.33
CAPRIN1-215ENST00000533657 SSFA2P28290 1259 aa13□□□□□ -0.33
CAPRIN1-215ENST00000533657 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 SF3B2Q13435 895 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 CHMP4BQ9H444 224 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 COPS6Q7L5N1 327 aa12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
CAPRIN1-215ENST00000533657 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 TCERG1O14776 1098 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 MYL6BP14649 208 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 TRIM28Q13263 835 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 MVPQ14764 893 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 KIF6Q6ZMV9 814 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 ANKRD13DQ6ZTN6 518 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 METTL22Q9BUU2 404 aaPredicted RBP12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 NRXN2Q9P2S2 1712 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 HSP90AB3PQ58FF7 597 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
CAPRIN1-215ENST00000533657 ANP32AP39687 249 aaKnown RBP12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 RTCBQ9Y3I0 505 aaKnown RBP12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 UTYO14607 1347 aa12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 ANXA1P04083 346 aa12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 RLBP1P12271 317 aa12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 AK7Q96M32 723 aa12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 DDX19BQ9UMR2 479 aa12.97□□□□□ -0.33
CAPRIN1-215ENST00000533657 EP400Q96L91 3159 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 PLIN1O60240 522 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 CAMTA2O94983 1202 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 IPO9Q96P70 1041 aaKnown RBP12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
CAPRIN1-215ENST00000533657 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.34
CAPRIN1-215ENST00000533657 TTLL7Q6ZT98 887 aa12.96□□□□□ -0.34
CAPRIN1-215ENST00000533657 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.343e-18■□□□□ 10.1
CAPRIN1-215ENST00000533657 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 TMEM57Q8N5G2 664 aa12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 GNPATO15228 680 aa12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
CAPRIN1-215ENST00000533657 EZH2Q15910 746 aaKnown RBP12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 DDX60Q8IY21 1712 aaKnown RBP12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
CAPRIN1-215ENST00000533657 NEXNQ0ZGT2 675 aa12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 ZNF827Q17R98 1081 aa12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 MYH3P11055 1940 aa12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 PPP4R2Q9NY27 417 aa12.93□□□□□ -0.34
CAPRIN1-215ENST00000533657 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 ZBTB7BO15156 539 aaPredicted RBP12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 TRAPPC3LQ5T215 181 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 F6X3S4 739 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 IGKV5-2P06315 115 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 KCNQ4P56696 695 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 AIMP1Q12904 312 aaKnown RBP12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 ZBTB40Q9NUA8 1239 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
CAPRIN1-215ENST00000533657 SLC15A2Q16348 729 aa12.91□□□□□ -0.34
CAPRIN1-215ENST00000533657 STK32BQ9NY57 414 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms