RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 MAP9Q49MG5 647 aa9.4□□□□□ -0.91
CTNND1-234ENST00000532844 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-234ENST00000532844 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.91
CTNND1-234ENST00000532844 NAPBQ9H115 298 aa9.4□□□□□ -0.91
CTNND1-234ENST00000532844 DHX29Q7Z478 1369 aaKnown RBP9.4□□□□□ -0.91
CTNND1-234ENST00000532844 URB2Q14146 1524 aaKnown RBP9.39□□□□□ -0.91
CTNND1-234ENST00000532844 SFPQP23246 707 aaKnown RBP eCLIP9.39□□□□□ -0.911e-8■■■□□ 15.1
CTNND1-234ENST00000532844 PTPN14Q15678 1187 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 ARHGAP29Q52LW3 1261 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 FAM114A1Q8IWE2 563 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 DNAI2Q9GZS0 605 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 GDPD2Q9HCC8 539 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 UGGT2Q9NYU1 1516 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 NUCB1Q02818 461 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 BBXQ8WY36 941 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-234ENST00000532844 USP25Q9UHP3 1055 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 AMOTL2Q9Y2J4 779 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 FANCAO15360 1455 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 CA8P35219 290 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 GRM1Q13255 1194 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 WDR66Q8TBY9 1149 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 TAF4BQ92750 862 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 PHF8Q9UPP1 1060 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 ANKRD18BA2A2Z9 1011 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 ZNF213O14771 459 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 ZNF76P36508 570 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 CHMP4BP1P59074 171 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 CCT2P78371 535 aaKnown RBP9.39□□□□□ -0.91
CTNND1-234ENST00000532844 IFIT5Q13325 482 aaKnown RBP9.39□□□□□ -0.91
CTNND1-234ENST00000532844 LUZP1Q86V48 1076 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 RBM27Q9P2N5 1060 aaKnown RBP9.39□□□□□ -0.91
CTNND1-234ENST00000532844 CAVIN4Q5BKX8 364 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 CCDC148Q8NFR7 591 aa9.39□□□□□ -0.91
CTNND1-234ENST00000532844 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-234ENST00000532844 SETSIPP0DME0 302 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 C6orf163Q5TEZ5 329 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 JAKMIP3Q5VZ66 844 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 GPATCH8Q9UKJ3 1502 aaKnown RBP9.38□□□□□ -0.91
CTNND1-234ENST00000532844 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 STX6O43752 255 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
CTNND1-234ENST00000532844 CASQ1P31415 396 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 KLHL10Q6JEL2 608 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 ZNF397Q8NF99 534 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-234ENST00000532844 PTPRKQ15262 1439 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 RFX1P22670 979 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
CTNND1-234ENST00000532844 CCDC113Q9H0I3 377 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 ECHDC1Q9NTX5 307 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 TMOD2Q9NZR1 351 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 CTAGE5O15320 804 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 ZSCAN12O43309 604 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 MCM3P25205 808 aa9.38□□□□□ -0.91
CTNND1-234ENST00000532844 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-234ENST00000532844 SEC63Q9UGP8 760 aaKnown RBP9.38□□□□□ -0.91
CTNND1-234ENST00000532844 A0A087WZG4 1122 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 SLC5A1P13866 664 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 ZNF652Q9Y2D9 606 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 GOLGA8AA7E2F4 631 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
CTNND1-234ENST00000532844 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 TMCO5BA8MYB1 307 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-234ENST00000532844 TOP1P11387 765 aaKnown RBP9.37□□□□□ -0.91
CTNND1-234ENST00000532844 PPP1R42Q7Z4L9 355 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 FSIP1Q8NA03 581 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 POLR3GO15318 223 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-234ENST00000532844 GTF2F1P35269 517 aaKnown RBP eCLIP9.37□□□□□ -0.915e-6■■■□□ 17.8
CTNND1-234ENST00000532844 CCDC82Q8N4S0 544 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 SCLT1Q96NL6 688 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 DDX19AQ9NUU7 478 aaKnown RBP9.37□□□□□ -0.91
CTNND1-234ENST00000532844 KDM5BQ9UGL1 1544 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 TIGD1Q96MW7 591 aa9.37□□□□□ -0.91
CTNND1-234ENST00000532844 GOLIM4O00461 696 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 SPECC1LQ69YQ0 1117 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 TRMT112Q9UI30 125 aaKnown RBP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 DRC1Q96MC2 740 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 PHAXQ9H814 394 aaKnown RBP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 MKNK2Q9HBH9 465 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 GCOM1H8Y6P7 765 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 RANBP6O60518 1105 aaKnown RBP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 MYZAPP0CAP1 466 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 FBLN1P23142 703 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 ADCY5O95622 1261 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 ZSCAN23Q3MJ62 389 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 KIF18AQ8NI77 898 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 IFIT3O14879 490 aaKnown RBP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 STX1AQ16623 288 aa9.36□□□□□ -0.91
CTNND1-234ENST00000532844 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 V9GYY5 206 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-234ENST00000532844 KIF5CO60282 957 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms