RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 ZHX1Q9UKY1 873 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-233ENST00000532787 GOLGA8AA7E2F4 631 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 GOLGA8BA8MQT2 603 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 ADCY5O95622 1261 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 PRPHP41219 470 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 KRT222Q8N1A0 295 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 CEP63Q96MT8 703 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 AQRO60306 1485 aaKnown RBP eCLIP8.75□□□□□ -1.012e-9■■■□□ 18.1
CTNND1-233ENST00000532787 FSD2A1L4K1 749 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 DCAF8L1A6NGE4 600 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 HS1BP3Q53T59 392 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 LRSAM1Q6UWE0 723 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 TCP11L1Q9NUJ3 509 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 MAP3K1Q13233 1512 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 PRG4Q92954 1404 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-233ENST00000532787 USP5P45974 858 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 TDRD12Q587J7 1177 aaKnown RBP8.75□□□□□ -1.01
CTNND1-233ENST00000532787 MPNDQ8N594 471 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 GOPCQ9HD26 462 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 USP25Q9UHP3 1055 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 IBSPP21815 317 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-233ENST00000532787 SSFA2P28290 1259 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 MTIF2P46199 727 aaKnown RBP8.75□□□□□ -1.01
CTNND1-233ENST00000532787 SPECC1Q5M775 1068 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 PPP4R3BQ5MIZ7 849 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 TMC6Q7Z403 805 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 TIGD1Q96MW7 591 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 MKNK2Q9HBH9 465 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 EXOC6BQ9Y2D4 811 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 CCDC61Q9Y6R9 512 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 TOP2BQ02880 1626 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 RBM5P52756 815 aaKnown RBP eCLIP8.74□□□□□ -1.01
CTNND1-233ENST00000532787 CCDC102BQ68D86 513 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 AFAP1Q8N556 730 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 CCDC155Q8N6L0 562 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 SREK1Q8WXA9 508 aaKnown RBP8.74□□□□□ -1.01
CTNND1-233ENST00000532787 DNAAF4Q8WXU2 420 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 POLR3DP05423 398 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-233ENST00000532787 FERMT3Q86UX7 667 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 TTC21BQ7Z4L5 1316 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 OPA1O60313 960 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 ZSCAN29Q8IWY8 852 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-233ENST00000532787 TRERF1Q96PN7 1200 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 TTC12Q9H892 705 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-233ENST00000532787 CLGNO14967 610 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 GJB2P29033 226 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-233ENST00000532787 TRAF1Q13077 416 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 KLHL10Q6JEL2 608 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 SSH1Q8WYL5 1049 aa8.74□□□□□ -1.01
CTNND1-233ENST00000532787 CYLC1P35663 651 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-233ENST00000532787 NLRP5P59047 1200 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 ZNF444Q8N0Y2 327 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-233ENST00000532787 ARHGAP45Q92619 1136 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 TBC1D32Q96NH3 1257 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 ECHDC1Q9NTX5 307 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 ZNF165P49910 485 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 HLTFQ14527 1009 aaKnown RBP eCLIP8.73□□□□□ -1.015e-6■□□□□ 9.8
CTNND1-233ENST00000532787 C16orf45Q96MC5 204 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-233ENST00000532787 STRN4Q9NRL3 753 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 RASAL2Q9UJF2 1139 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 EPRSP07814 1512 aaKnown RBP8.73□□□□□ -1.01
CTNND1-233ENST00000532787 HSPA4P34932 840 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 CLCN1P35523 988 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 KCNG4Q8TDN1 519 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 TSNARE1Q96NA8 513 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 FAM135AQ9P2D6 1515 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 GTF2A1P52655 376 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-233ENST00000532787 IFIT5Q13325 482 aaKnown RBP8.73□□□□□ -1.01
CTNND1-233ENST00000532787 CCDC40Q4G0X9 1142 aa8.73□□□□□ -1.01
CTNND1-233ENST00000532787 DBF4Q9UBU7 674 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-233ENST00000532787 FERP16591 822 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 IARSP41252 1262 aaKnown RBP8.72□□□□□ -1.01
CTNND1-233ENST00000532787 HDAC1Q13547 482 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-233ENST00000532787 USP37Q86T82 979 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 NUDT16Q96DE0 195 aaKnown RBP8.72□□□□□ -1.01
CTNND1-233ENST00000532787 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.72□□□□□ -1.017e-6■□□□□ 8.3
CTNND1-233ENST00000532787 TEX13AQ9BXU3 409 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-233ENST00000532787 IFIT3O14879 490 aaKnown RBP8.72□□□□□ -1.01
CTNND1-233ENST00000532787 FERMT2Q96AC1 680 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 LRRC45Q96CN5 670 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 SELENOOQ9BVL4 669 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 NAIPQ13075 1403 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 PIK3R4Q99570 1358 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 LDHCP07864 332 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 CTNNA2P26232 953 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 GTF2F1P35269 517 aaKnown RBP eCLIP8.72□□□□□ -1.015e-6■■■□□ 17.8
CTNND1-233ENST00000532787 TTC22Q5TAA0 569 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 TMTC2Q8N394 836 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 SNX21Q969T3 373 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 BCCIPQ9P287 314 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■■□ 21.2
CTNND1-233ENST00000532787 RALGAPBQ86X10 1494 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 MAATS1Q7Z4T9 603 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 DDX54Q8TDD1 881 aaKnown RBP8.72□□□□□ -1.01
CTNND1-233ENST00000532787 TTC14Q96N46 770 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 BOLA2Q9H3K6 86 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 ARFGAP3Q9NP61 516 aa8.72□□□□□ -1.01
CTNND1-233ENST00000532787 MRC2Q9UBG0 1479 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms