RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 DDX21Q9NR30 783 aaKnown RBP eCLIP18.11■□□□□ 0.49
TSPAN4-220ENST00000532375 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
TSPAN4-220ENST00000532375 ELL2O00472 640 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-220ENST00000532375 SERPINB2P05120 415 aa18.1■□□□□ 0.49
TSPAN4-220ENST00000532375 MAP3K15Q6ZN16 1313 aa18.09■□□□□ 0.49
TSPAN4-220ENST00000532375 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
TSPAN4-220ENST00000532375 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
TSPAN4-220ENST00000532375 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-220ENST00000532375 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
TSPAN4-220ENST00000532375 FANCIQ9NVI1 1328 aa18.08■□□□□ 0.49
TSPAN4-220ENST00000532375 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
TSPAN4-220ENST00000532375 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-220ENST00000532375 KCNA3P22001 575 aa18.07■□□□□ 0.48
TSPAN4-220ENST00000532375 TGFB2P61812 414 aa18.07■□□□□ 0.48
TSPAN4-220ENST00000532375 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
TSPAN4-220ENST00000532375 XAGE3Q8WTP9 111 aa18.06■□□□□ 0.48
TSPAN4-220ENST00000532375 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-220ENST00000532375 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 CARMIL3Q8ND23 1372 aa18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 PRR5LQ6MZQ0 368 aa18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 GIGYF2Q6Y7W6 1299 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 ZNF34Q8IZ26 560 aa18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 ZNF652Q9Y2D9 606 aa18.05■□□□□ 0.48
TSPAN4-220ENST00000532375 GOLGB1Q14789 3259 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-220ENST00000532375 A0A0G2JLW4 131 aa18.04■□□□□ 0.48
TSPAN4-220ENST00000532375 DPEP1P16444 411 aa18.04■□□□□ 0.48
TSPAN4-220ENST00000532375 YBX3P16989 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
TSPAN4-220ENST00000532375 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-220ENST00000532375 ATP10DQ9P241 1426 aa18.04■□□□□ 0.48
TSPAN4-220ENST00000532375 UTRNP46939 3433 aa18.03■□□□□ 0.48
TSPAN4-220ENST00000532375 VAMP4O75379 141 aa18.03■□□□□ 0.48
TSPAN4-220ENST00000532375 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-220ENST00000532375 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
TSPAN4-220ENST00000532375 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
TSPAN4-220ENST00000532375 NIP7Q9Y221 180 aaKnown RBP eCLIP18.03■□□□□ 0.48
TSPAN4-220ENST00000532375 UBN2Q6ZU65 1347 aa18.02■□□□□ 0.48
TSPAN4-220ENST00000532375 GOLGA2Q08379 1002 aa18.02■□□□□ 0.48
TSPAN4-220ENST00000532375 AIMP1Q12904 312 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-220ENST00000532375 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
TSPAN4-220ENST00000532375 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-220ENST00000532375 SLFN5Q08AF3 891 aa18.01■□□□□ 0.47
TSPAN4-220ENST00000532375 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
TSPAN4-220ENST00000532375 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-220ENST00000532375 ANKRD36CQ5JPF3 1778 aa18■□□□□ 0.47
TSPAN4-220ENST00000532375 CHRNA5P30532 468 aa18■□□□□ 0.47
TSPAN4-220ENST00000532375 ANKRD13DQ6ZTN6 518 aa18■□□□□ 0.47
TSPAN4-220ENST00000532375 CDCA7LQ96GN5 454 aa18■□□□□ 0.47
TSPAN4-220ENST00000532375 BRIP1Q9BX63 1249 aa18■□□□□ 0.47
TSPAN4-220ENST00000532375 MYH16Q9H6N6 1097 aa18■□□□□ 0.47
TSPAN4-220ENST00000532375 CACNA1FO60840 1977 aa18■□□□□ 0.47
TSPAN4-220ENST00000532375 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-220ENST00000532375 GPTP24298 496 aa17.99■□□□□ 0.47
TSPAN4-220ENST00000532375 TCIRG1Q13488 830 aa17.99■□□□□ 0.47
TSPAN4-220ENST00000532375 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
TSPAN4-220ENST00000532375 PLBD2Q8NHP8 589 aa17.99■□□□□ 0.47
TSPAN4-220ENST00000532375 DLEC1Q9Y238 1755 aa17.99■□□□□ 0.47
TSPAN4-220ENST00000532375 KLRG2A4D1S0 409 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-220ENST00000532375 GPR162Q16538 588 aa17.98■□□□□ 0.47
TSPAN4-220ENST00000532375 G2E3Q7L622 706 aa17.98■□□□□ 0.47
TSPAN4-220ENST00000532375 NBPF5PQ86XG9 351 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-220ENST00000532375 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
TSPAN4-220ENST00000532375 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
TSPAN4-220ENST00000532375 E9PSI1 815 aa17.97■□□□□ 0.47
TSPAN4-220ENST00000532375 TPTE2Q6XPS3 522 aa17.97■□□□□ 0.47
TSPAN4-220ENST00000532375 WWC3Q9ULE0 1092 aa17.97■□□□□ 0.47
TSPAN4-220ENST00000532375 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
TSPAN4-220ENST00000532375 IBTKQ9P2D0 1353 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-220ENST00000532375 COL11A2P13942 1736 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-220ENST00000532375 FAM177BA6PVY3 158 aa17.96■□□□□ 0.47
TSPAN4-220ENST00000532375 NTSR2O95665 410 aa17.96■□□□□ 0.47
TSPAN4-220ENST00000532375 ISCA1Q9BUE6 129 aa17.96■□□□□ 0.47
TSPAN4-220ENST00000532375 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
TSPAN4-220ENST00000532375 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
TSPAN4-220ENST00000532375 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
TSPAN4-220ENST00000532375 PARP10Q53GL7 1025 aa17.95■□□□□ 0.46
TSPAN4-220ENST00000532375 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
TSPAN4-220ENST00000532375 PIM2Q9P1W9 311 aa17.95■□□□□ 0.46
TSPAN4-220ENST00000532375 CHD4Q14839 1912 aa17.95■□□□□ 0.46
TSPAN4-220ENST00000532375 ABCC12Q96J65 1359 aa17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 PDE6BP35913 854 aa17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 TRIM28Q13263 835 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 HSP90AB3PQ58FF7 597 aa17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 NUTM1Q86Y26 1132 aa17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 PELP1Q8IZL8 1130 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-220ENST00000532375 GRIN3BO60391 1043 aa17.93■□□□□ 0.46
TSPAN4-220ENST00000532375 ST5P78524 1137 aa17.93■□□□□ 0.46
TSPAN4-220ENST00000532375 SLC10A5Q5PT55 438 aa17.93■□□□□ 0.46
TSPAN4-220ENST00000532375 NYXQ9GZU5 481 aa17.93■□□□□ 0.46
TSPAN4-220ENST00000532375 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
TSPAN4-220ENST00000532375 TNRC6CQ9HCJ0 1690 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-220ENST00000532375 ADCY9O60503 1353 aa17.92■□□□□ 0.46
TSPAN4-220ENST00000532375 RIC1Q4ADV7 1423 aa17.92■□□□□ 0.46
TSPAN4-220ENST00000532375 H0YIN7 160 aa17.92■□□□□ 0.46
TSPAN4-220ENST00000532375 SRGNP10124 158 aa17.92■□□□□ 0.46
TSPAN4-220ENST00000532375 SYNE4Q8N205 404 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 285.6 ms