RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 IFT57Q9NWB7 429 aa29.93■■■□□ 2.38
CAPN1-222ENST00000532285 ERVV-1B6SEH8 477 aa29.92■■■□□ 2.38
CAPN1-222ENST00000532285 GNAI1P63096 354 aa29.92■■■□□ 2.38
CAPN1-222ENST00000532285 KIF6Q6ZMV9 814 aa29.92■■■□□ 2.38
CAPN1-222ENST00000532285 PRR5LQ6MZQ0 368 aa29.91■■■□□ 2.38
CAPN1-222ENST00000532285 MBIPQ9NS73 344 aa29.91■■■□□ 2.38
CAPN1-222ENST00000532285 MAP3K15Q6ZN16 1313 aa29.91■■■□□ 2.38
CAPN1-222ENST00000532285 NPHP1O15259 732 aa29.9■■■□□ 2.38
CAPN1-222ENST00000532285 HOXB7P09629 217 aa29.9■■■□□ 2.38
CAPN1-222ENST00000532285 PDIA6Q15084 440 aa29.9■■■□□ 2.38
CAPN1-222ENST00000532285 HLFQ16534 295 aa29.9■■■□□ 2.38
CAPN1-222ENST00000532285 KRT24Q2M2I5 525 aa29.9■■■□□ 2.38
CAPN1-222ENST00000532285 CNBD1Q8NA66 436 aa29.9■■■□□ 2.38
CAPN1-222ENST00000532285 CCDC27Q2M243 656 aa29.89■■■□□ 2.38
CAPN1-222ENST00000532285 DALRD3Q5D0E6 543 aaKnown RBP29.89■■■□□ 2.38
CAPN1-222ENST00000532285 TTLL7Q6ZT98 887 aa29.89■■■□□ 2.38
CAPN1-222ENST00000532285 BRIP1Q9BX63 1249 aa29.89■■■□□ 2.38
CAPN1-222ENST00000532285 NIP7Q9Y221 180 aaKnown RBP eCLIP29.89■■■□□ 2.38
CAPN1-222ENST00000532285 PDZRN3Q9UPQ7 1066 aa29.88■■■□□ 2.37
CAPN1-222ENST00000532285 H0YIN7 160 aa29.87■■■□□ 2.37
CAPN1-222ENST00000532285 PDE6BP35913 854 aa29.87■■■□□ 2.37
CAPN1-222ENST00000532285 ST5P78524 1137 aa29.87■■■□□ 2.37
CAPN1-222ENST00000532285 NCBP3Q53F19 620 aaKnown RBP29.87■■■□□ 2.37
CAPN1-222ENST00000532285 NBPF5PQ86XG9 351 aaPredicted RBP29.87■■■□□ 2.37
CAPN1-222ENST00000532285 C2CD5Q86YS7 1000 aa29.87■■■□□ 2.37
CAPN1-222ENST00000532285 NECTIN2Q92692 538 aa29.87■■■□□ 2.37
CAPN1-222ENST00000532285 LRP10Q7Z4F1 713 aa29.86■■■□□ 2.37
CAPN1-222ENST00000532285 PROSER3Q2NL68 480 aa29.85■■■□□ 2.37
CAPN1-222ENST00000532285 CCDC24Q8N4L8 307 aa29.85■■■□□ 2.37
CAPN1-222ENST00000532285 ZNF784Q8NCA9 323 aaPredicted RBP29.85■■■□□ 2.37
CAPN1-222ENST00000532285 DDX21Q9NR30 783 aaKnown RBP eCLIP29.85■■■□□ 2.37
CAPN1-222ENST00000532285 DUSP27Q5VZP5 1158 aa29.84■■■□□ 2.37
CAPN1-222ENST00000532285 TPTE2Q6XPS3 522 aa29.84■■■□□ 2.37
CAPN1-222ENST00000532285 ZBTB3Q9H5J0 574 aa29.84■■■□□ 2.37
CAPN1-222ENST00000532285 ATP10DQ9P241 1426 aa29.83■■■□□ 2.37
CAPN1-222ENST00000532285 ANXA1P04083 346 aa29.83■■■□□ 2.37
CAPN1-222ENST00000532285 HDGFL1Q5TGJ6 251 aa29.83■■■□□ 2.37
CAPN1-222ENST00000532285 WWC1Q8IX03 1113 aa29.83■■■□□ 2.37
CAPN1-222ENST00000532285 ARHGAP27Q6ZUM4 889 aa29.82■■■□□ 2.36
CAPN1-222ENST00000532285 COL11A2P13942 1736 aaPredicted RBP29.82■■■□□ 2.36
CAPN1-222ENST00000532285 SENP3-EIF4A1A0A087X0R7 540 aa29.81■■■□□ 2.36
CAPN1-222ENST00000532285 GIGYF2Q6Y7W6 1299 aaKnown RBP29.81■■■□□ 2.36
CAPN1-222ENST00000532285 FAM9BQ8IZU0 186 aa29.81■■■□□ 2.36
CAPN1-222ENST00000532285 TTLL6Q8N841 843 aa29.81■■■□□ 2.36
CAPN1-222ENST00000532285 CHPF2Q9P2E5 772 aa29.8■■■□□ 2.36
CAPN1-222ENST00000532285 FAM177BA6PVY3 158 aa29.79■■■□□ 2.36
CAPN1-222ENST00000532285 COPS6Q7L5N1 327 aa29.79■■■□□ 2.36
CAPN1-222ENST00000532285 NYXQ9GZU5 481 aa29.79■■■□□ 2.36
CAPN1-222ENST00000532285 DBF4Q9UBU7 674 aaPredicted RBP29.79■■■□□ 2.36
CAPN1-222ENST00000532285 ANKRD36CQ5JPF3 1778 aa29.78■■■□□ 2.36
CAPN1-222ENST00000532285 XAGE3Q8WTP9 111 aa29.78■■■□□ 2.36
CAPN1-222ENST00000532285 GTF2E1P29083 439 aaPredicted RBP29.77■■■□□ 2.36
CAPN1-222ENST00000532285 AIMP1Q12904 312 aaKnown RBP29.77■■■□□ 2.36
CAPN1-222ENST00000532285 ZNF34Q8IZ26 560 aa29.77■■■□□ 2.36
CAPN1-222ENST00000532285 ZNF622Q969S3 477 aaKnown RBP eCLIP29.77■■■□□ 2.36
CAPN1-222ENST00000532285 IL16Q14005 1332 aa29.76■■■□□ 2.36
CAPN1-222ENST00000532285 GPTP24298 496 aa29.76■■■□□ 2.35
CAPN1-222ENST00000532285 CACNA1SQ13698 1873 aa29.76■■■□□ 2.35
CAPN1-222ENST00000532285 CHMP4AQ9BY43 222 aa29.75■■■□□ 2.35
CAPN1-222ENST00000532285 ELL2O00472 640 aaPredicted RBP29.74■■■□□ 2.35
CAPN1-222ENST00000532285 SRGNP10124 158 aa29.74■■■□□ 2.35
CAPN1-222ENST00000532285 C8orf58Q8NAV2 365 aa29.74■■■□□ 2.35
CAPN1-222ENST00000532285 HYPKQ9NX55 129 aa29.74■■■□□ 2.35
CAPN1-222ENST00000532285 ARFGEF2Q9Y6D5 1785 aa29.74■■■□□ 2.35
CAPN1-222ENST00000532285 IBTKQ9P2D0 1353 aaPredicted RBP29.74■■■□□ 2.35
CAPN1-222ENST00000532285 SBF1O95248 1867 aa29.74■■■□□ 2.35
CAPN1-222ENST00000532285 UBN2Q6ZU65 1347 aa29.73■■■□□ 2.35
CAPN1-222ENST00000532285 KLRG2A4D1S0 409 aaPredicted RBP29.73■■■□□ 2.35
CAPN1-222ENST00000532285 STYK1Q6J9G0 422 aa29.73■■■□□ 2.35
CAPN1-222ENST00000532285 MASTLQ96GX5 879 aa29.73■■■□□ 2.35
CAPN1-222ENST00000532285 ADCY9O60503 1353 aa29.73■■■□□ 2.35
CAPN1-222ENST00000532285 PARP10Q53GL7 1025 aa29.72■■■□□ 2.35
CAPN1-222ENST00000532285 HSP90AB3PQ58FF7 597 aa29.72■■■□□ 2.35
CAPN1-222ENST00000532285 WDR63Q8IWG1 891 aa29.72■■■□□ 2.35
CAPN1-222ENST00000532285 TSR2Q969E8 191 aaKnown RBP29.72■■■□□ 2.35
CAPN1-222ENST00000532285 CNKSR1Q969H4 720 aa29.72■■■□□ 2.35
CAPN1-222ENST00000532285 SALL2Q9Y467 1007 aaPredicted RBP29.72■■■□□ 2.35
CAPN1-222ENST00000532285 SUSD4Q5VX71 490 aa29.71■■■□□ 2.35
CAPN1-222ENST00000532285 PPP1R42Q7Z4L9 355 aa29.71■■■□□ 2.35
CAPN1-222ENST00000532285 SLX4Q8IY92 1834 aa29.7■■■□□ 2.34
CAPN1-222ENST00000532285 NUTM1Q86Y26 1132 aa29.69■■■□□ 2.34
CAPN1-222ENST00000532285 PLBD2Q8NHP8 589 aa29.69■■■□□ 2.34
CAPN1-222ENST00000532285 NPR1P16066 1061 aa29.68■■■□□ 2.34
CAPN1-222ENST00000532285 TCIRG1Q13488 830 aa29.68■■■□□ 2.34
CAPN1-222ENST00000532285 ERFEQ4G0M1 354 aa29.68■■■□□ 2.34
CAPN1-222ENST00000532285 ANKRD13DQ6ZTN6 518 aa29.68■■■□□ 2.34
CAPN1-222ENST00000532285 CCDC88AQ3V6T2 1871 aa29.68■■■□□ 2.34
CAPN1-222ENST00000532285 TNRC6CQ9HCJ0 1690 aaKnown RBP29.67■■■□□ 2.34
CAPN1-222ENST00000532285 NTSR2O95665 410 aa29.67■■■□□ 2.34
CAPN1-222ENST00000532285 CCDC30Q5VVM6 783 aa29.67■■■□□ 2.34
CAPN1-222ENST00000532285 TSPYL6Q8N831 410 aa29.67■■■□□ 2.34
CAPN1-222ENST00000532285 RIC1Q4ADV7 1423 aa29.67■■■□□ 2.34
CAPN1-222ENST00000532285 ABCC12Q96J65 1359 aa29.65■■■□□ 2.34
CAPN1-222ENST00000532285 C9orf131Q5VYM1 1079 aa29.65■■■□□ 2.34
CAPN1-222ENST00000532285 UTP14AQ9BVJ6 771 aaKnown RBP29.65■■■□□ 2.34
CAPN1-222ENST00000532285 FER1L6Q2WGJ9 1857 aa29.65■■■□□ 2.34
CAPN1-222ENST00000532285 C21orf2O43822 256 aa29.64■■■□□ 2.34
CAPN1-222ENST00000532285 PRPF40BQ6NWY9 871 aaKnown RBP29.64■■■□□ 2.34
CAPN1-222ENST00000532285 NLRP10Q86W26 655 aa29.63■■■□□ 2.33
CAPN1-222ENST00000532285 RNF123Q5XPI4 1314 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms