RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 KIF6Q6ZMV9 814 aa21.65■■□□□ 1.06
SF3B2-211ENST00000531041 ARXQ96QS3 562 aa21.65■■□□□ 1.06
SF3B2-211ENST00000531041 BCL2L13Q9BXK5 485 aa21.65■■□□□ 1.06
SF3B2-211ENST00000531041 ERVV-1B6SEH8 477 aa21.64■■□□□ 1.06
SF3B2-211ENST00000531041 RGL2O15211 777 aa21.64■■□□□ 1.06
SF3B2-211ENST00000531041 MSH5O43196 834 aa21.64■■□□□ 1.06
SF3B2-211ENST00000531041 CAMTA2O94983 1202 aa21.64■■□□□ 1.06
SF3B2-211ENST00000531041 SLC16A10Q8TF71 515 aa21.64■■□□□ 1.06
SF3B2-211ENST00000531041 PDGFDQ9GZP0 370 aaPredicted RBP21.64■■□□□ 1.06
SF3B2-211ENST00000531041 PSDA5PKW4 1024 aaPredicted RBP21.63■■□□□ 1.05
SF3B2-211ENST00000531041 ANKRD13DQ6ZTN6 518 aa21.63■■□□□ 1.05
SF3B2-211ENST00000531041 SRP68Q9UHB9 627 aaKnown RBP21.63■■□□□ 1.05
SF3B2-211ENST00000531041 RCAN3Q9UKA8 241 aa21.63■■□□□ 1.05
SF3B2-211ENST00000531041 DDX58O95786 925 aaKnown RBP21.63■■□□□ 1.05
SF3B2-211ENST00000531041 USPL1Q5W0Q7 1092 aa21.63■■□□□ 1.05
SF3B2-211ENST00000531041 PLBD2Q8NHP8 589 aa21.63■■□□□ 1.05
SF3B2-211ENST00000531041 BCAR3O75815 825 aa21.62■■□□□ 1.05
SF3B2-211ENST00000531041 GYS1P13807 737 aa21.62■■□□□ 1.05
SF3B2-211ENST00000531041 CLEC4GQ6UXB4 293 aa21.62■■□□□ 1.05
SF3B2-211ENST00000531041 BCL2L12Q9HB09 334 aa21.62■■□□□ 1.05
SF3B2-211ENST00000531041 AFDNP55196 1824 aaKnown RBP21.62■■□□□ 1.05
SF3B2-211ENST00000531041 PTPRCP08575 1304 aa21.61■■□□□ 1.05
SF3B2-211ENST00000531041 KIF16BQ96L93 1317 aa21.61■■□□□ 1.05
SF3B2-211ENST00000531041 FKBP5Q13451 457 aaPredicted RBP21.61■■□□□ 1.05
SF3B2-211ENST00000531041 ZBTB3Q9H5J0 574 aa21.61■■□□□ 1.05
SF3B2-211ENST00000531041 N4BP2Q86UW6 1770 aaPredicted RBP21.6■■□□□ 1.05
SF3B2-211ENST00000531041 HLFQ16534 295 aa21.6■■□□□ 1.05
SF3B2-211ENST00000531041 GIGYF2Q6Y7W6 1299 aaKnown RBP21.6■■□□□ 1.05
SF3B2-211ENST00000531041 ZNF652Q9Y2D9 606 aa21.6■■□□□ 1.05
SF3B2-211ENST00000531041 PI4KAP2A4QPH2 592 aa21.59■■□□□ 1.05
SF3B2-211ENST00000531041 KSR2Q6VAB6 950 aa21.59■■□□□ 1.05
SF3B2-211ENST00000531041 RIC3Q7Z5B4 369 aa21.59■■□□□ 1.05
SF3B2-211ENST00000531041 NLGN1Q8N2Q7 840 aa21.59■■□□□ 1.05
SF3B2-211ENST00000531041 PI4KAP1Q8N8J0 262 aa21.59■■□□□ 1.05
SF3B2-211ENST00000531041 ADCY9O60503 1353 aa21.59■■□□□ 1.05
SF3B2-211ENST00000531041 FKBP8Q14318 412 aa21.58■■□□□ 1.05
SF3B2-211ENST00000531041 NOB1Q9ULX3 412 aaKnown RBP21.58■■□□□ 1.05
SF3B2-211ENST00000531041 ARHGAP45Q92619 1136 aa21.57■■□□□ 1.04
SF3B2-211ENST00000531041 ATP10DQ9P241 1426 aa21.57■■□□□ 1.04
SF3B2-211ENST00000531041 MTFR1LQ9H019 292 aa21.56■■□□□ 1.04
SF3B2-211ENST00000531041 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
SF3B2-211ENST00000531041 IPO8O15397 1037 aaKnown RBP21.55■■□□□ 1.04
SF3B2-211ENST00000531041 TCIRG1Q13488 830 aa21.55■■□□□ 1.04
SF3B2-211ENST00000531041 HSP90AB3PQ58FF7 597 aa21.55■■□□□ 1.04
SF3B2-211ENST00000531041 TBC1D9BQ66K14 1250 aa21.55■■□□□ 1.04
SF3B2-211ENST00000531041 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
SF3B2-211ENST00000531041 METTL22Q9BUU2 404 aaPredicted RBP21.55■■□□□ 1.04
SF3B2-211ENST00000531041 NRXN2Q9P2S2 1712 aa21.54■■□□□ 1.04
SF3B2-211ENST00000531041 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
SF3B2-211ENST00000531041 TM4SF1P30408 202 aa21.54■■□□□ 1.04
SF3B2-211ENST00000531041 MSL1Q68DK7 614 aa21.54■■□□□ 1.04
SF3B2-211ENST00000531041 ZNF34Q8IZ26 560 aa21.54■■□□□ 1.04
SF3B2-211ENST00000531041 FRAT1Q92837 279 aaPredicted RBP21.54■■□□□ 1.04
SF3B2-211ENST00000531041 API5Q9BZZ5 524 aaKnown RBP21.54■■□□□ 1.04
SF3B2-211ENST00000531041 F6X3S4 739 aa21.53■■□□□ 1.04
SF3B2-211ENST00000531041 NFIXQ14938 502 aa21.53■■□□□ 1.04
SF3B2-211ENST00000531041 PXDNLA1KZ92 1463 aa21.52■■□□□ 1.04
SF3B2-211ENST00000531041 ZKSCAN2Q63HK3 967 aa21.52■■□□□ 1.04
SF3B2-211ENST00000531041 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
SF3B2-211ENST00000531041 SETDB2Q96T68 719 aa21.52■■□□□ 1.04
SF3B2-211ENST00000531041 ISCA1Q9BUE6 129 aa21.52■■□□□ 1.04
SF3B2-211ENST00000531041 NIP7Q9Y221 180 aaKnown RBP eCLIP21.52■■□□□ 1.04
SF3B2-211ENST00000531041 NEXNQ0ZGT2 675 aa21.51■■□□□ 1.03
SF3B2-211ENST00000531041 TRIM28Q13263 835 aaKnown RBP21.51■■□□□ 1.03
SF3B2-211ENST00000531041 TRIM27P14373 513 aa21.5■■□□□ 1.03
SF3B2-211ENST00000531041 BICDL1Q6ZP65 573 aa21.5■■□□□ 1.03
SF3B2-211ENST00000531041 MYD88Q99836 296 aa21.5■■□□□ 1.03
SF3B2-211ENST00000531041 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
SF3B2-211ENST00000531041 UBN2Q6ZU65 1347 aa21.5■■□□□ 1.03
SF3B2-211ENST00000531041 CARMIL3Q8ND23 1372 aa21.5■■□□□ 1.03
SF3B2-211ENST00000531041 MMP10P09238 476 aa21.49■■□□□ 1.03
SF3B2-211ENST00000531041 GPTP24298 496 aa21.49■■□□□ 1.03
SF3B2-211ENST00000531041 PARP10Q53GL7 1025 aa21.49■■□□□ 1.03
SF3B2-211ENST00000531041 LINS1Q8NG48 757 aa21.49■■□□□ 1.03
SF3B2-211ENST00000531041 ATP5J2-PTCD1G3V325 749 aa21.48■■□□□ 1.03
SF3B2-211ENST00000531041 IGKV5-2P06315 115 aa21.48■■□□□ 1.03
SF3B2-211ENST00000531041 DDR1Q08345 913 aa21.48■■□□□ 1.03
SF3B2-211ENST00000531041 BEND3Q5T5X7 828 aa21.48■■□□□ 1.03
SF3B2-211ENST00000531041 SLC4A10Q6U841 1118 aa21.48■■□□□ 1.03
SF3B2-211ENST00000531041 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.48■■□□□ 1.03
SF3B2-211ENST00000531041 SGIP1Q9BQI5 828 aa21.48■■□□□ 1.03
SF3B2-211ENST00000531041 SPON1Q9HCB6 807 aa21.48■■□□□ 1.03
SF3B2-211ENST00000531041 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
SF3B2-211ENST00000531041 NLRP10Q86W26 655 aa21.47■■□□□ 1.03
SF3B2-211ENST00000531041 CCDC191Q8NCU4 936 aa21.47■■□□□ 1.03
SF3B2-211ENST00000531041 PARP3Q9Y6F1 533 aa21.47■■□□□ 1.03
SF3B2-211ENST00000531041 ABCC4O15439 1325 aa21.47■■□□□ 1.03
SF3B2-211ENST00000531041 KIF13BQ9NQT8 1826 aa21.47■■□□□ 1.03
SF3B2-211ENST00000531041 NEURL1BA8MQ27 555 aa21.46■■□□□ 1.03
SF3B2-211ENST00000531041 PTGER2P43116 358 aa21.46■■□□□ 1.03
SF3B2-211ENST00000531041 IBTKQ9P2D0 1353 aaPredicted RBP21.46■■□□□ 1.03
SF3B2-211ENST00000531041 SERPINB2P05120 415 aa21.46■■□□□ 1.03
SF3B2-211ENST00000531041 POLD1P28340 1107 aa21.46■■□□□ 1.03
SF3B2-211ENST00000531041 CWF19L2Q2TBE0 894 aaKnown RBP21.46■■□□□ 1.03
SF3B2-211ENST00000531041 PPP1R42Q7Z4L9 355 aa21.46■■□□□ 1.03
SF3B2-211ENST00000531041 LAMB2P55268 1798 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 MYH3P11055 1940 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 ALDH1L1O75891 902 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 MS4A1P11836 297 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 CCT4P50991 539 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms