RNA–Protein interactions for RNA: ENST00000530236.5

ABI3BP-223, Transcript of ABI family member 3 binding protein, human

TSL 4

Gene ABI3BP, Length 553 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABI3BP-223	ENST00000530236	KCTD17	Q8N5Z5	321 aa		8	□□□□□ -1.13
ABI3BP-223	ENST00000530236	ARHGEF1	Q92888	912 aa	Known RBP	8	□□□□□ -1.13
ABI3BP-223	ENST00000530236	TFCP2L1	Q9NZI6	479 aa		8	□□□□□ -1.13
ABI3BP-223	ENST00000530236	TSR3	Q9UJK0	312 aa	Known RBP	8	□□□□□ -1.13
ABI3BP-223	ENST00000530236	HSPA6	P17066	643 aa		7.99	□□□□□ -1.13
ABI3BP-223	ENST00000530236	PRIM1	P49642	420 aa	Known RBP	7.99	□□□□□ -1.13
ABI3BP-223	ENST00000530236	MSL1	Q68DK7	614 aa		7.99	□□□□□ -1.13
ABI3BP-223	ENST00000530236	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.99	□□□□□ -1.13
ABI3BP-223	ENST00000530236	DDX54	Q8TDD1	881 aa	Known RBP	7.99	□□□□□ -1.13
ABI3BP-223	ENST00000530236	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	7.99	□□□□□ -1.13
ABI3BP-223	ENST00000530236	ANKRD36B	Q8N2N9	1353 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	RGPD2	P0DJD1	1756 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	GRIN3B	O60391	1043 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	PRSS12	P56730	875 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	AMIGO3	Q86WK7	504 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	RGS22	Q8NE09	1264 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	L3MBTL2	Q969R5	705 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	CDCA7L	Q96GN5	454 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	LRCH3	Q96II8	777 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	MEGF6	O75095	1541 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	TOGARAM1	Q9Y4F4	1720 aa		7.98	□□□□□ -1.13
ABI3BP-223	ENST00000530236	SEMA3E	O15041	775 aa		7.97	□□□□□ -1.13
ABI3BP-223	ENST00000530236	C5	P01031	1676 aa		7.96	□□□□□ -1.13
ABI3BP-223	ENST00000530236	OSBP	P22059	807 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	FBLN1	P23142	703 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	KCNC4	Q03721	635 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	ZNF526	Q8TF50	670 aa	Predicted RBP	7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	IP6K1	Q92551	441 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	TRAIP	Q9BWF2	469 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	FAM198A	Q9UFP1	575 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	CCNL1	Q9UK58	526 aa	Predicted RBP	7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	HPS5	Q9UPZ3	1129 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	TAF1L	Q8IZX4	1826 aa		7.96	□□□□□ -1.14
ABI3BP-223	ENST00000530236	RAD21	O60216	631 aa		7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	SMIM5	Q71RC9	77 aa		7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	DNAJC5G	Q8N7S2	189 aa		7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	SYTL4	Q96C24	671 aa	Predicted RBP	7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	LTV1	Q96GA3	475 aa	Predicted RBP	7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	AK7	Q96M32	723 aa		7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	SLC12A5	Q9H2X9	1139 aa		7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	KDM4C	Q9H3R0	1056 aa		7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	RBM27	Q9P2N5	1060 aa	Known RBP	7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	CD2AP	Q9Y5K6	639 aa		7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	EDC4	Q6P2E9	1401 aa	Known RBP	7.95	□□□□□ -1.14
ABI3BP-223	ENST00000530236	CIC	Q96RK0	1608 aa	Predicted RBP	7.94	□□□□□ -1.14
ABI3BP-223	ENST00000530236	GRXCR2	A6NFK2	248 aa		7.94	□□□□□ -1.14
ABI3BP-223	ENST00000530236	CCDC82	Q8N4S0	544 aa		7.94	□□□□□ -1.14
ABI3BP-223	ENST00000530236	WWC3	Q9ULE0	1092 aa		7.94	□□□□□ -1.14
ABI3BP-223	ENST00000530236	MAP3K19	Q56UN5	1328 aa		7.94	□□□□□ -1.14
ABI3BP-223	ENST00000530236		A0A1W2PP64	1363 aa		7.94	□□□□□ -1.14
ABI3BP-223	ENST00000530236	KIAA1551	Q9HCM1	1747 aa		7.93	□□□□□ -1.14
ABI3BP-223	ENST00000530236	ZCRB1	Q8TBF4	217 aa	Known RBP	7.93	□□□□□ -1.14
ABI3BP-223	ENST00000530236	IRX2	Q9BZI1	471 aa	Predicted RBP	7.93	□□□□□ -1.14
ABI3BP-223	ENST00000530236	UBR3	Q6ZT12	1888 aa		7.93	□□□□□ -1.14
ABI3BP-223	ENST00000530236	ROCK2	O75116	1388 aa	Known RBP	7.93	□□□□□ -1.14
ABI3BP-223	ENST00000530236	C4B	P0C0L5	1744 aa		7.92	□□□□□ -1.14
ABI3BP-223	ENST00000530236	NBPF26	B4DH59	902 aa		7.92	□□□□□ -1.14
ABI3BP-223	ENST00000530236	HOXC9	P31274	260 aa		7.92	□□□□□ -1.14
ABI3BP-223	ENST00000530236	TATDN2	Q93075	761 aa		7.92	□□□□□ -1.14
ABI3BP-223	ENST00000530236	SIN3A	Q96ST3	1273 aa		7.92	□□□□□ -1.14
ABI3BP-223	ENST00000530236	IGSF1	Q8N6C5	1336 aa		7.92	□□□□□ -1.14
ABI3BP-223	ENST00000530236	MAP2	P11137	1827 aa	Known RBP	7.92	□□□□□ -1.14
ABI3BP-223	ENST00000530236	PCNT	O95613	3336 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	C3orf80	F5H4A9	247 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	EIF5B	O60841	1220 aa	Known RBP	7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	PPP4C	P60510	307 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	NBPF6	Q5VWK0	638 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	USHBP1	Q8N6Y0	703 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	NBPF4	Q96M43	638 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	PALLD	Q8WX93	1383 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	USP47	Q96K76	1375 aa		7.91	□□□□□ -1.14
ABI3BP-223	ENST00000530236	ITGB4	P16144	1822 aa		7.9	□□□□□ -1.14
ABI3BP-223	ENST00000530236	SMAP	O00193	183 aa		7.9	□□□□□ -1.14
ABI3BP-223	ENST00000530236	SAMD7	Q7Z3H4	446 aa		7.9	□□□□□ -1.14
ABI3BP-223	ENST00000530236	TTC13	Q8NBP0	860 aa		7.9	□□□□□ -1.14
ABI3BP-223	ENST00000530236	TMC1	Q8TDI8	760 aa		7.9	□□□□□ -1.14
ABI3BP-223	ENST00000530236	CDHR5	Q9HBB8	845 aa		7.9	□□□□□ -1.14
ABI3BP-223	ENST00000530236	MTMR7	Q9Y216	660 aa		7.9	□□□□□ -1.14
ABI3BP-223	ENST00000530236	KIF13B	Q9NQT8	1826 aa		7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	PXDNL	A1KZ92	1463 aa		7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	CYP27B1	O15528	508 aa		7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	HTRA3	P83110	453 aa		7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	FLII	Q13045	1269 aa		7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	NPDC1	Q9NQX5	325 aa	Predicted RBP	7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	PNMA3	Q9UL41	463 aa		7.89	□□□□□ -1.15
ABI3BP-223	ENST00000530236	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	APLP1	P51693	650 aa		7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	RRS1	Q15050	365 aa	Known RBP	7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	TJAP1	Q5JTD0	557 aa		7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	COL13A1	Q5TAT6	717 aa	Predicted RBP	7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	LINC00116	Q8NCU8	138 aa		7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	FLAD1	Q8NFF5	587 aa		7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	PIGB	Q92521	554 aa		7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	NMRK2	Q9NPI5	230 aa		7.88	□□□□□ -1.15
ABI3BP-223	ENST00000530236	N4BP2	Q86UW6	1770 aa	Predicted RBP	7.87	□□□□□ -1.15
ABI3BP-223	ENST00000530236	RTL1	A6NKG5	1358 aa		7.87	□□□□□ -1.15
ABI3BP-223	ENST00000530236	PKD1L3	Q7Z443	1732 aa		7.87	□□□□□ -1.15
ABI3BP-223	ENST00000530236	WDR90	Q96KV7	1748 aa		7.87	□□□□□ -1.15
ABI3BP-223	ENST00000530236		A6NJR5	290 aa		7.87	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms