RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 BRIP1Q9BX63 1249 aa18.59■□□□□ 0.57
SIPA1-206ENST00000530226 PRKRIP1Q9H875 184 aaPredicted RBP18.59■□□□□ 0.57
SIPA1-206ENST00000530226 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
SIPA1-206ENST00000530226 TNRC6CQ9HCJ0 1690 aaKnown RBP18.58■□□□□ 0.57
SIPA1-206ENST00000530226 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
SIPA1-206ENST00000530226 TTLL6Q8N841 843 aa18.58■□□□□ 0.56
SIPA1-206ENST00000530226 NUP98P52948 1817 aa18.58■□□□□ 0.56
SIPA1-206ENST00000530226 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
SIPA1-206ENST00000530226 BABAM1Q9NWV8 329 aa18.57■□□□□ 0.56
SIPA1-206ENST00000530226 C9orf131Q5VYM1 1079 aa18.56■□□□□ 0.56
SIPA1-206ENST00000530226 KIF6Q6ZMV9 814 aa18.56■□□□□ 0.56
SIPA1-206ENST00000530226 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
SIPA1-206ENST00000530226 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
SIPA1-206ENST00000530226 RUNDC1Q96C34 613 aa18.56■□□□□ 0.56
SIPA1-206ENST00000530226 FER1L6Q2WGJ9 1857 aa18.54■□□□□ 0.56
SIPA1-206ENST00000530226 ZC3H4Q9UPT8 1303 aaKnown RBP18.54■□□□□ 0.56
SIPA1-206ENST00000530226 TOMM70O94826 608 aa18.54■□□□□ 0.56
SIPA1-206ENST00000530226 NMRK2Q9NPI5 230 aa18.54■□□□□ 0.56
SIPA1-206ENST00000530226 RNF181Q9P0P0 153 aa18.54■□□□□ 0.56
SIPA1-206ENST00000530226 NIP7Q9Y221 180 aaKnown RBP eCLIP18.54■□□□□ 0.56
SIPA1-206ENST00000530226 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
SIPA1-206ENST00000530226 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
SIPA1-206ENST00000530226 CCDC24Q8N4L8 307 aa18.53■□□□□ 0.56
SIPA1-206ENST00000530226 ZNF622Q969S3 477 aaKnown RBP eCLIP18.53■□□□□ 0.56
SIPA1-206ENST00000530226 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.56
SIPA1-206ENST00000530226 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.56
SIPA1-206ENST00000530226 RASSF7Q02833 373 aa18.52■□□□□ 0.56
SIPA1-206ENST00000530226 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
SIPA1-206ENST00000530226 IBTKQ9P2D0 1353 aaPredicted RBP18.52■□□□□ 0.55
SIPA1-206ENST00000530226 ERVV-1B6SEH8 477 aa18.51■□□□□ 0.55
SIPA1-206ENST00000530226 MYL6BP14649 208 aa18.51■□□□□ 0.55
SIPA1-206ENST00000530226 STYK1Q6J9G0 422 aa18.51■□□□□ 0.55
SIPA1-206ENST00000530226 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
SIPA1-206ENST00000530226 CNKSR1Q969H4 720 aa18.51■□□□□ 0.55
SIPA1-206ENST00000530226 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
SIPA1-206ENST00000530226 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
SIPA1-206ENST00000530226 KDM2BQ8NHM5 1336 aa18.5■□□□□ 0.55
SIPA1-206ENST00000530226 LMNB1P20700 586 aa18.5■□□□□ 0.55
SIPA1-206ENST00000530226 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
SIPA1-206ENST00000530226 ADAMTS8Q9UP79 889 aa18.5■□□□□ 0.55
SIPA1-206ENST00000530226 RIC1Q4ADV7 1423 aa18.49■□□□□ 0.55
SIPA1-206ENST00000530226 SRGNP10124 158 aa18.49■□□□□ 0.55
SIPA1-206ENST00000530226 HLFQ16534 295 aa18.49■□□□□ 0.55
SIPA1-206ENST00000530226 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
SIPA1-206ENST00000530226 MASTLQ96GX5 879 aa18.49■□□□□ 0.55
SIPA1-206ENST00000530226 NYXQ9GZU5 481 aa18.49■□□□□ 0.55
SIPA1-206ENST00000530226 GTF2E1P29083 439 aaPredicted RBP18.48■□□□□ 0.55
SIPA1-206ENST00000530226 PRELPP51888 382 aa18.48■□□□□ 0.55
SIPA1-206ENST00000530226 PRPF40BQ6NWY9 871 aaKnown RBP18.48■□□□□ 0.55
SIPA1-206ENST00000530226 DNAJC5GQ8N7S2 189 aa18.48■□□□□ 0.55
SIPA1-206ENST00000530226 NFKBIEO00221 500 aa18.47■□□□□ 0.55
SIPA1-206ENST00000530226 APLP1P51693 650 aa18.47■□□□□ 0.55
SIPA1-206ENST00000530226 TTLL7Q6ZT98 887 aa18.47■□□□□ 0.55
SIPA1-206ENST00000530226 RBM46Q8TBY0 533 aaKnown RBP18.47■□□□□ 0.55
SIPA1-206ENST00000530226 ZBTB3Q9H5J0 574 aa18.47■□□□□ 0.55
SIPA1-206ENST00000530226 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
SIPA1-206ENST00000530226 ABCC12Q96J65 1359 aa18.46■□□□□ 0.55
SIPA1-206ENST00000530226 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
SIPA1-206ENST00000530226 C21orf2O43822 256 aa18.46■□□□□ 0.55
SIPA1-206ENST00000530226 NPR1P16066 1061 aa18.46■□□□□ 0.55
SIPA1-206ENST00000530226 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
SIPA1-206ENST00000530226 LTBP3Q9NS15 1303 aa18.46■□□□□ 0.55
SIPA1-206ENST00000530226 CHL1O00533 1208 aa18.45■□□□□ 0.54
SIPA1-206ENST00000530226 TAOK3Q9H2K8 898 aa18.45■□□□□ 0.54
SIPA1-206ENST00000530226 ZNF219Q9P2Y4 722 aaPredicted RBP18.45■□□□□ 0.54
SIPA1-206ENST00000530226 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
SIPA1-206ENST00000530226 KLRG2A4D1S0 409 aaPredicted RBP18.44■□□□□ 0.54
SIPA1-206ENST00000530226 HOXB7P09629 217 aa18.44■□□□□ 0.54
SIPA1-206ENST00000530226 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
SIPA1-206ENST00000530226 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
SIPA1-206ENST00000530226 RRAGCQ9HB90 399 aa18.44■□□□□ 0.54
SIPA1-206ENST00000530226 UBN2Q6ZU65 1347 aa18.44■□□□□ 0.54
SIPA1-206ENST00000530226 PCNTO95613 3336 aa18.44■□□□□ 0.54
SIPA1-206ENST00000530226 GPTP24298 496 aa18.43■□□□□ 0.54
SIPA1-206ENST00000530226 IFFO2Q5TF58 517 aa18.43■□□□□ 0.54
SIPA1-206ENST00000530226 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
SIPA1-206ENST00000530226 LRP10Q7Z4F1 713 aa18.43■□□□□ 0.54
SIPA1-206ENST00000530226 PDIA6Q15084 440 aa18.42■□□□□ 0.54
SIPA1-206ENST00000530226 PROSER3Q2NL68 480 aa18.42■□□□□ 0.54
SIPA1-206ENST00000530226 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
SIPA1-206ENST00000530226 CCDC93Q567U6 631 aa18.42■□□□□ 0.54
SIPA1-206ENST00000530226 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
SIPA1-206ENST00000530226 WDR90Q96KV7 1748 aa18.41■□□□□ 0.54
SIPA1-206ENST00000530226 FSTL1Q12841 308 aa18.41■□□□□ 0.54
SIPA1-206ENST00000530226 HSP90AB3PQ58FF7 597 aa18.41■□□□□ 0.54
SIPA1-206ENST00000530226 HDGFL1Q5TGJ6 251 aa18.41■□□□□ 0.54
SIPA1-206ENST00000530226 NUTM1Q86Y26 1132 aa18.41■□□□□ 0.54
SIPA1-206ENST00000530226 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
SIPA1-206ENST00000530226 GLTPD2A6NH11 291 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 APAF1O14727 1248 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 ANXA1P04083 346 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 ALDH1B1P30837 517 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 CRY2Q49AN0 593 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 DDX21Q9NR30 783 aaKnown RBP eCLIP18.4■□□□□ 0.54
SIPA1-206ENST00000530226 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
SIPA1-206ENST00000530226 LAMB2P55268 1798 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms