RNA–Protein interactions for RNA: ENST00000529539.5

CHID1-216, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-216ENST00000529539 C9orf131Q5VYM1 1079 aa27.94■■■□□ 2.06
CHID1-216ENST00000529539 NBPF5PQ86XG9 351 aaPredicted RBP27.94■■■□□ 2.06
CHID1-216ENST00000529539 CCDC146Q8IYE0 955 aa27.94■■■□□ 2.06
CHID1-216ENST00000529539 TPTE2Q6XPS3 522 aa27.93■■■□□ 2.06
CHID1-216ENST00000529539 NIP7Q9Y221 180 aaKnown RBP eCLIP27.93■■■□□ 2.06
CHID1-216ENST00000529539 ZC3H4Q9UPT8 1303 aaKnown RBP27.92■■■□□ 2.06
CHID1-216ENST00000529539 ZNF526Q8TF50 670 aaPredicted RBP27.92■■■□□ 2.06
CHID1-216ENST00000529539 MAP3K15Q6ZN16 1313 aa27.92■■■□□ 2.06
CHID1-216ENST00000529539 CHL1O00533 1208 aa27.91■■■□□ 2.06
CHID1-216ENST00000529539 STYK1Q6J9G0 422 aa27.91■■■□□ 2.06
CHID1-216ENST00000529539 TRIM35Q9UPQ4 493 aa27.91■■■□□ 2.06
CHID1-216ENST00000529539 RRP7AQ9Y3A4 280 aaKnown RBP27.91■■■□□ 2.06
CHID1-216ENST00000529539 SBF1O95248 1867 aa27.91■■■□□ 2.06
CHID1-216ENST00000529539 SRGNP10124 158 aa27.9■■■□□ 2.06
CHID1-216ENST00000529539 KIF6Q6ZMV9 814 aa27.9■■■□□ 2.06
CHID1-216ENST00000529539 CNKSR1Q969H4 720 aa27.9■■■□□ 2.06
CHID1-216ENST00000529539 ZNF622Q969S3 477 aaKnown RBP eCLIP27.9■■■□□ 2.06
CHID1-216ENST00000529539 COL11A2P13942 1736 aaPredicted RBP27.89■■■□□ 2.06
CHID1-216ENST00000529539 KLRG2A4D1S0 409 aaPredicted RBP27.89■■■□□ 2.06
CHID1-216ENST00000529539 NEUROD2Q15784 382 aa27.89■■■□□ 2.06
CHID1-216ENST00000529539 HLFQ16534 295 aa27.89■■■□□ 2.06
CHID1-216ENST00000529539 MASTLQ96GX5 879 aa27.89■■■□□ 2.06
CHID1-216ENST00000529539 RNF181Q9P0P0 153 aa27.89■■■□□ 2.06
CHID1-216ENST00000529539 CCDC24Q8N4L8 307 aa27.88■■■□□ 2.05
CHID1-216ENST00000529539 KIF3CO14782 793 aa27.87■■■□□ 2.05
CHID1-216ENST00000529539 LMNB1P20700 586 aa27.87■■■□□ 2.05
CHID1-216ENST00000529539 NYXQ9GZU5 481 aa27.87■■■□□ 2.05
CHID1-216ENST00000529539 MYL6BP14649 208 aa27.86■■■□□ 2.05
CHID1-216ENST00000529539 IBTKQ9P2D0 1353 aaPredicted RBP27.86■■■□□ 2.05
CHID1-216ENST00000529539 NUP98P52948 1817 aa27.85■■■□□ 2.05
CHID1-216ENST00000529539 SOGA3Q5TF21 947 aa27.85■■■□□ 2.05
CHID1-216ENST00000529539 TTLL7Q6ZT98 887 aa27.85■■■□□ 2.05
CHID1-216ENST00000529539 LRP10Q7Z4F1 713 aa27.85■■■□□ 2.05
CHID1-216ENST00000529539 NGEFQ8N5V2 710 aa27.85■■■□□ 2.05
CHID1-216ENST00000529539 ARFGEF2Q9Y6D5 1785 aa27.84■■■□□ 2.05
CHID1-216ENST00000529539 PDIA6Q15084 440 aa27.84■■■□□ 2.05
CHID1-216ENST00000529539 KDM2BQ8NHM5 1336 aa27.84■■■□□ 2.05
CHID1-216ENST00000529539 SENP3-EIF4A1A0A087X0R7 540 aa27.83■■■□□ 2.05
CHID1-216ENST00000529539 HOXB7P09629 217 aa27.83■■■□□ 2.05
CHID1-216ENST00000529539 NPR1P16066 1061 aa27.83■■■□□ 2.05
CHID1-216ENST00000529539 GIGYF2Q6Y7W6 1299 aaKnown RBP27.83■■■□□ 2.05
CHID1-216ENST00000529539 CFAP44Q96MT7 982 aa27.83■■■□□ 2.05
CHID1-216ENST00000529539 NFKBIEO00221 500 aa27.82■■■□□ 2.04
CHID1-216ENST00000529539 EIF2S2P20042 333 aaKnown RBP27.82■■■□□ 2.04
CHID1-216ENST00000529539 RASSF7Q02833 373 aa27.82■■■□□ 2.04
CHID1-216ENST00000529539 LTBP3Q9NS15 1303 aa27.82■■■□□ 2.04
CHID1-216ENST00000529539 C21orf2O43822 256 aa27.81■■■□□ 2.04
CHID1-216ENST00000529539 GTF2E1P29083 439 aaPredicted RBP27.81■■■□□ 2.04
CHID1-216ENST00000529539 PRPF40BQ6NWY9 871 aaKnown RBP27.81■■■□□ 2.04
CHID1-216ENST00000529539 RIC1Q4ADV7 1423 aa27.81■■■□□ 2.04
CHID1-216ENST00000529539 CALD1Q05682 793 aaKnown RBP27.8■■■□□ 2.04
CHID1-216ENST00000529539 ZNF34Q8IZ26 560 aa27.8■■■□□ 2.04
CHID1-216ENST00000529539 ZBTB3Q9H5J0 574 aa27.8■■■□□ 2.04
CHID1-216ENST00000529539 FER1L6Q2WGJ9 1857 aa27.8■■■□□ 2.04
CHID1-216ENST00000529539 DDX21Q9NR30 783 aaKnown RBP eCLIP27.79■■■□□ 2.04
CHID1-216ENST00000529539 SLX4Q8IY92 1834 aa27.78■■■□□ 2.04
CHID1-216ENST00000529539 ZNF316A6NFI3 1004 aaPredicted RBP27.78■■■□□ 2.04
CHID1-216ENST00000529539 APAF1O14727 1248 aa27.78■■■□□ 2.04
CHID1-216ENST00000529539 TOMM70O94826 608 aa27.78■■■□□ 2.04
CHID1-216ENST00000529539 PARP10Q53GL7 1025 aa27.78■■■□□ 2.04
CHID1-216ENST00000529539 CEP350Q5VT06 3117 aa27.77■■■□□ 2.04
CHID1-216ENST00000529539 PRELPP51888 382 aa27.77■■■□□ 2.04
CHID1-216ENST00000529539 CRY2Q49AN0 593 aa27.77■■■□□ 2.04
CHID1-216ENST00000529539 C7orf43Q8WVR3 580 aa27.77■■■□□ 2.04
CHID1-216ENST00000529539 NMRK2Q9NPI5 230 aa27.77■■■□□ 2.04
CHID1-216ENST00000529539 LAS1LQ9Y4W2 734 aaKnown RBP27.77■■■□□ 2.04
CHID1-216ENST00000529539 UBN2Q6ZU65 1347 aa27.76■■■□□ 2.03
CHID1-216ENST00000529539 FAM177BA6PVY3 158 aa27.76■■■□□ 2.03
CHID1-216ENST00000529539 ZNF853P0CG23 659 aa27.76■■■□□ 2.03
CHID1-216ENST00000529539 ALDH1B1P30837 517 aa27.76■■■□□ 2.03
CHID1-216ENST00000529539 PROSER3Q2NL68 480 aa27.75■■■□□ 2.03
CHID1-216ENST00000529539 HSP90AB3PQ58FF7 597 aa27.75■■■□□ 2.03
CHID1-216ENST00000529539 PPP1R42Q7Z4L9 355 aa27.75■■■□□ 2.03
CHID1-216ENST00000529539 TAOK3Q9H2K8 898 aa27.75■■■□□ 2.03
CHID1-216ENST00000529539 IFT57Q9NWB7 429 aa27.75■■■□□ 2.03
CHID1-216ENST00000529539 TNRC6CQ9HCJ0 1690 aaKnown RBP27.75■■■□□ 2.03
CHID1-216ENST00000529539 RNF123Q5XPI4 1314 aa27.74■■■□□ 2.03
CHID1-216ENST00000529539 CCDC88AQ3V6T2 1871 aa27.74■■■□□ 2.03
CHID1-216ENST00000529539 GLTPD2A6NH11 291 aa27.73■■■□□ 2.03
CHID1-216ENST00000529539 HSPA6P17066 643 aa27.73■■■□□ 2.03
CHID1-216ENST00000529539 GPTP24298 496 aa27.73■■■□□ 2.03
CHID1-216ENST00000529539 GNAI1P63096 354 aa27.73■■■□□ 2.03
CHID1-216ENST00000529539 SUSD4Q5VX71 490 aa27.73■■■□□ 2.03
CHID1-216ENST00000529539 COPS6Q7L5N1 327 aa27.73■■■□□ 2.03
CHID1-216ENST00000529539 ABCC12Q96J65 1359 aa27.73■■■□□ 2.03
CHID1-216ENST00000529539 DICER1Q9UPY3 1922 aaKnown RBP27.73■■■□□ 2.03
CHID1-216ENST00000529539 NTSR2O95665 410 aa27.72■■■□□ 2.03
CHID1-216ENST00000529539 KRT24Q2M2I5 525 aa27.72■■■□□ 2.03
CHID1-216ENST00000529539 ERFEQ4G0M1 354 aa27.72■■■□□ 2.03
CHID1-216ENST00000529539 CCDC93Q567U6 631 aa27.72■■■□□ 2.03
CHID1-216ENST00000529539 HDGFL1Q5TGJ6 251 aa27.72■■■□□ 2.03
CHID1-216ENST00000529539 MBIPQ9NS73 344 aa27.72■■■□□ 2.03
CHID1-216ENST00000529539 ZNF219Q9P2Y4 722 aaPredicted RBP27.72■■■□□ 2.03
CHID1-216ENST00000529539 DBF4Q9UBU7 674 aaPredicted RBP27.72■■■□□ 2.03
CHID1-216ENST00000529539 CACNA1SQ13698 1873 aa27.72■■■□□ 2.03
CHID1-216ENST00000529539 ANXA1P04083 346 aa27.71■■■□□ 2.03
CHID1-216ENST00000529539 NUTM1Q86Y26 1132 aa27.71■■■□□ 2.03
CHID1-216ENST00000529539 TIAM2Q8IVF5 1701 aa27.71■■■□□ 2.03
CHID1-216ENST00000529539 RBM46Q8TBY0 533 aaKnown RBP27.71■■■□□ 2.03
CHID1-216ENST00000529539 HOXA10P31260 410 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms