RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 EP400Q96L91 3159 aa12.67□□□□□ -0.38
RPS3-210ENST00000528439 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
RPS3-210ENST00000528439 STARD3NLO95772 234 aa12.67□□□□□ -0.38
RPS3-210ENST00000528439 IGKV5-2P06315 115 aa12.67□□□□□ -0.38
RPS3-210ENST00000528439 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
RPS3-210ENST00000528439 INTS5Q6P9B9 1019 aaKnown RBP12.67□□□□□ -0.38
RPS3-210ENST00000528439 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
RPS3-210ENST00000528439 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
RPS3-210ENST00000528439 DDX58O95786 925 aaKnown RBP12.66□□□□□ -0.38
RPS3-210ENST00000528439 CWF19L2Q2TBE0 894 aaKnown RBP12.66□□□□□ -0.38
RPS3-210ENST00000528439 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
RPS3-210ENST00000528439 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
RPS3-210ENST00000528439 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
RPS3-210ENST00000528439 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
RPS3-210ENST00000528439 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 MYD88Q99836 296 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 METTL22Q9BUU2 404 aaPredicted RBP12.65□□□□□ -0.38
RPS3-210ENST00000528439 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
RPS3-210ENST00000528439 ANKRD36CQ5JPF3 1778 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
RPS3-210ENST00000528439 ALDH1L1O75891 902 aa12.64□□□□□ -0.39
RPS3-210ENST00000528439 TRIM37O94972 964 aa12.64□□□□□ -0.39
RPS3-210ENST00000528439 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
RPS3-210ENST00000528439 CEP85Q6P2H3 762 aa12.64□□□□□ -0.39
RPS3-210ENST00000528439 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
RPS3-210ENST00000528439 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
RPS3-210ENST00000528439 CNTNAP4Q9C0A0 1308 aa12.63□□□□□ -0.39
RPS3-210ENST00000528439 NEURL1BA8MQ27 555 aa12.63□□□□□ -0.39
RPS3-210ENST00000528439 IL6STP40189 918 aaPredicted RBP12.63□□□□□ -0.39
RPS3-210ENST00000528439 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
RPS3-210ENST00000528439 CHMP4BQ9H444 224 aaKnown RBP12.63□□□□□ -0.39
RPS3-210ENST00000528439 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
RPS3-210ENST00000528439 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
RPS3-210ENST00000528439 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
RPS3-210ENST00000528439 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
RPS3-210ENST00000528439 NBPF7P0C2Y1 421 aaPredicted RBP12.62□□□□□ -0.39
RPS3-210ENST00000528439 LRRC4BQ9NT99 713 aa12.62□□□□□ -0.39
RPS3-210ENST00000528439 LRRFIP2Q9Y608 721 aaKnown RBP12.62□□□□□ -0.39
RPS3-210ENST00000528439 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
RPS3-210ENST00000528439 UTYO14607 1347 aa12.62□□□□□ -0.39
RPS3-210ENST00000528439 COL15A1P39059 1388 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 NUP98P52948 1817 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 GNAI2P04899 355 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 GNAI3P08754 354 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
RPS3-210ENST00000528439 HLFQ16534 295 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 ANKRD44Q8N8A2 993 aa12.61□□□□□ -0.39
RPS3-210ENST00000528439 GRM8O00222 908 aa12.6□□□□□ -0.39
RPS3-210ENST00000528439 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
RPS3-210ENST00000528439 NEXNQ0ZGT2 675 aa12.6□□□□□ -0.39
RPS3-210ENST00000528439 GCKRQ14397 625 aa12.6□□□□□ -0.39
RPS3-210ENST00000528439 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
RPS3-210ENST00000528439 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
RPS3-210ENST00000528439 SUCLG2Q96I99 432 aa12.6□□□□□ -0.39
RPS3-210ENST00000528439 RWDD1Q9H446 243 aaPredicted RBP12.6□□□□□ -0.39
RPS3-210ENST00000528439 RGPD3A6NKT7 1758 aaPredicted RBP12.6□□□□□ -0.39
RPS3-210ENST00000528439 RGPD4Q7Z3J3 1758 aa12.6□□□□□ -0.39
RPS3-210ENST00000528439 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
RPS3-210ENST00000528439 SF3B2Q13435 895 aaKnown RBP12.59□□□□□ -0.39
RPS3-210ENST00000528439 CCDC125Q86Z20 511 aa12.59□□□□□ -0.39
RPS3-210ENST00000528439 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
RPS3-210ENST00000528439 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPS3-210ENST00000528439 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
RPS3-210ENST00000528439 ISCA1Q9BUE6 129 aa12.59□□□□□ -0.39
RPS3-210ENST00000528439 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
RPS3-210ENST00000528439 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
RPS3-210ENST00000528439 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
RPS3-210ENST00000528439 CASP7P55210 303 aa12.58□□□□□ -0.4
RPS3-210ENST00000528439 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
RPS3-210ENST00000528439 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
RPS3-210ENST00000528439 UBN2Q6ZU65 1347 aa12.58□□□□□ -0.4
RPS3-210ENST00000528439 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
RPS3-210ENST00000528439 EPHA10Q5JZY3 1008 aa12.57□□□□□ -0.4
RPS3-210ENST00000528439 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
RPS3-210ENST00000528439 RPAP2Q8IXW5 612 aaPredicted RBP12.57□□□□□ -0.4
RPS3-210ENST00000528439 PROM2Q8N271 834 aa12.57□□□□□ -0.4
RPS3-210ENST00000528439 C9orf78Q9NZ63 289 aaPredicted RBP12.57□□□□□ -0.4
RPS3-210ENST00000528439 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
RPS3-210ENST00000528439 TUBGCP6Q96RT7 1819 aa12.57□□□□□ -0.4
RPS3-210ENST00000528439 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
RPS3-210ENST00000528439 GNPATO15228 680 aa12.56□□□□□ -0.4
RPS3-210ENST00000528439 APBA3O96018 575 aa12.56□□□□□ -0.4
RPS3-210ENST00000528439 GPTP24298 496 aa12.56□□□□□ -0.4
RPS3-210ENST00000528439 UBE3BQ7Z3V4 1068 aa12.56□□□□□ -0.4
RPS3-210ENST00000528439 ARXQ96QS3 562 aa12.56□□□□□ -0.4
RPS3-210ENST00000528439 BICC1Q9H694 974 aaKnown RBP12.56□□□□□ -0.4
RPS3-210ENST00000528439 CWC25Q9NXE8 425 aaPredicted RBP12.56□□□□□ -0.4
RPS3-210ENST00000528439 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
RPS3-210ENST00000528439 A0A087WZG4 1122 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 BAG6P46379 1132 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms