RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 EPHX2P34913 555 aa14.77□□□□□ -0.05
NEDD8-204ENST00000526430 MTHFSP49914 203 aa14.77□□□□□ -0.05
NEDD8-204ENST00000526430 EIF4A2Q14240 407 aaKnown RBP14.77□□□□□ -0.05
NEDD8-204ENST00000526430 CC2D1BQ5T0F9 858 aaKnown RBP14.77□□□□□ -0.05
NEDD8-204ENST00000526430 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.05
NEDD8-204ENST00000526430 CAPNS2Q96L46 248 aa14.77□□□□□ -0.05
NEDD8-204ENST00000526430 CNKSR1Q969H4 720 aa14.76□□□□□ -0.05
NEDD8-204ENST00000526430 CFAP44Q96MT7 982 aa14.76□□□□□ -0.05
NEDD8-204ENST00000526430 POLKQ9UBT6 870 aa14.76□□□□□ -0.05
NEDD8-204ENST00000526430 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
NEDD8-204ENST00000526430 MAP2K2P36507 400 aa14.75□□□□□ -0.05
NEDD8-204ENST00000526430 MAP1SQ66K74 1059 aaPredicted RBP14.75□□□□□ -0.05
NEDD8-204ENST00000526430 GPR101Q96P66 508 aaPredicted RBP14.75□□□□□ -0.05
NEDD8-204ENST00000526430 DDX21Q9NR30 783 aaKnown RBP eCLIP14.75□□□□□ -0.05
NEDD8-204ENST00000526430 ZNF219Q9P2Y4 722 aaPredicted RBP14.75□□□□□ -0.05
NEDD8-204ENST00000526430 ZNF541Q9H0D2 1346 aa14.74□□□□□ -0.05
NEDD8-204ENST00000526430 C1orf141Q5JVX7 400 aa14.74□□□□□ -0.05
NEDD8-204ENST00000526430 PRPF38BQ5VTL8 546 aaKnown RBP14.74□□□□□ -0.05
NEDD8-204ENST00000526430 STYK1Q6J9G0 422 aa14.74□□□□□ -0.05
NEDD8-204ENST00000526430 PRPF40BQ6NWY9 871 aaKnown RBP14.74□□□□□ -0.05
NEDD8-204ENST00000526430 ZBTB1Q9Y2K1 713 aa14.74□□□□□ -0.05
NEDD8-204ENST00000526430 PRR5LQ6MZQ0 368 aa14.73□□□□□ -0.05
NEDD8-204ENST00000526430 MORC1Q86VD1 984 aa14.73□□□□□ -0.05
NEDD8-204ENST00000526430 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
NEDD8-204ENST00000526430 CYP4F22Q6NT55 531 aa14.72□□□□□ -0.05
NEDD8-204ENST00000526430 RNF123Q5XPI4 1314 aa14.71□□□□□ -0.05
NEDD8-204ENST00000526430 AKAP11Q9UKA4 1901 aa14.71□□□□□ -0.05
NEDD8-204ENST00000526430 SRGNP10124 158 aa14.71□□□□□ -0.05
NEDD8-204ENST00000526430 CNGB1Q14028 1251 aaPredicted RBP14.71□□□□□ -0.05
NEDD8-204ENST00000526430 C7orf43Q8WVR3 580 aa14.71□□□□□ -0.05
NEDD8-204ENST00000526430 TSKSQ9UJT2 592 aa14.71□□□□□ -0.05
NEDD8-204ENST00000526430 DGKZQ13574 1117 aa14.7□□□□□ -0.06
NEDD8-204ENST00000526430 CCDC93Q567U6 631 aa14.7□□□□□ -0.06
NEDD8-204ENST00000526430 BICDL1Q6ZP65 573 aa14.7□□□□□ -0.06
NEDD8-204ENST00000526430 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
NEDD8-204ENST00000526430 VSIG10Q8N0Z9 540 aa14.7□□□□□ -0.06
NEDD8-204ENST00000526430 GPC2Q8N158 579 aa14.7□□□□□ -0.06
NEDD8-204ENST00000526430 MASTLQ96GX5 879 aa14.7□□□□□ -0.06
NEDD8-204ENST00000526430 TLL2Q9Y6L7 1015 aa14.7□□□□□ -0.06
NEDD8-204ENST00000526430 A0A087WZG4 1122 aa14.69□□□□□ -0.06
NEDD8-204ENST00000526430 FZD9O00144 591 aa14.69□□□□□ -0.06
NEDD8-204ENST00000526430 EIF5P55010 431 aaKnown RBP14.69□□□□□ -0.06
NEDD8-204ENST00000526430 BRPF1P55201 1214 aaPredicted RBP14.69□□□□□ -0.06
NEDD8-204ENST00000526430 FKBP4Q02790 459 aaKnown RBP eCLIP14.69□□□□□ -0.06
NEDD8-204ENST00000526430 TBC1D9BQ66K14 1250 aa14.69□□□□□ -0.06
NEDD8-204ENST00000526430 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
NEDD8-204ENST00000526430 PPP2R1AP30153 589 aa14.68□□□□□ -0.06
NEDD8-204ENST00000526430 CST9Q5W186 159 aa14.67□□□□□ -0.06
NEDD8-204ENST00000526430 CNBD1Q8NA66 436 aa14.67□□□□□ -0.06
NEDD8-204ENST00000526430 HHIPL1Q96JK4 782 aa14.67□□□□□ -0.06
NEDD8-204ENST00000526430 PRKRIP1Q9H875 184 aaPredicted RBP14.67□□□□□ -0.06
NEDD8-204ENST00000526430 SIPA1L3O60292 1781 aaPredicted RBP14.67□□□□□ -0.06
NEDD8-204ENST00000526430 AOC2O75106 756 aa14.66□□□□□ -0.06
NEDD8-204ENST00000526430 GRM1Q13255 1194 aa14.66□□□□□ -0.06
NEDD8-204ENST00000526430 ZNF277Q9NRM2 450 aaPredicted RBP14.66□□□□□ -0.06
NEDD8-204ENST00000526430 ST5P78524 1137 aa14.65□□□□□ -0.06
NEDD8-204ENST00000526430 RTKN2Q8IZC4 609 aa14.65□□□□□ -0.06
NEDD8-204ENST00000526430 CCDC24Q8N4L8 307 aa14.65□□□□□ -0.06
NEDD8-204ENST00000526430 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
NEDD8-204ENST00000526430 IARSP41252 1262 aaKnown RBP14.64□□□□□ -0.07
NEDD8-204ENST00000526430 FMR1Q06787 632 aaKnown RBP eCLIP14.64□□□□□ -0.07
NEDD8-204ENST00000526430 RALBP1Q15311 655 aa14.64□□□□□ -0.07
NEDD8-204ENST00000526430 AKAP4Q5JQC9 854 aa14.64□□□□□ -0.07
NEDD8-204ENST00000526430 SAPCD2Q86UD0 394 aa14.64□□□□□ -0.07
NEDD8-204ENST00000526430 AEBP1Q8IUX7 1158 aa14.64□□□□□ -0.07
NEDD8-204ENST00000526430 SNED1Q8TER0 1413 aa14.64□□□□□ -0.07
NEDD8-204ENST00000526430 STARD3NLO95772 234 aa14.63□□□□□ -0.07
NEDD8-204ENST00000526430 SLC39A6Q13433 755 aa14.63□□□□□ -0.07
NEDD8-204ENST00000526430 SETDB2Q96T68 719 aa14.63□□□□□ -0.07
NEDD8-204ENST00000526430 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
NEDD8-204ENST00000526430 COL4A5P29400 1685 aa14.62□□□□□ -0.07
NEDD8-204ENST00000526430 NPR1P16066 1061 aa14.62□□□□□ -0.07
NEDD8-204ENST00000526430 LMOD1P29536 600 aaPredicted RBP14.62□□□□□ -0.07
NEDD8-204ENST00000526430 IL13P35225 146 aa14.62□□□□□ -0.07
NEDD8-204ENST00000526430 SOX10P56693 466 aa14.62□□□□□ -0.07
NEDD8-204ENST00000526430 USP50Q70EL3 339 aaPredicted RBP14.62□□□□□ -0.07
NEDD8-204ENST00000526430 KLRG2A4D1S0 409 aaPredicted RBP14.61□□□□□ -0.07
NEDD8-204ENST00000526430 TRAF5O00463 557 aa14.61□□□□□ -0.07
NEDD8-204ENST00000526430 NPHP1O15259 732 aa14.61□□□□□ -0.07
NEDD8-204ENST00000526430 SCNN1DP51172 638 aa14.61□□□□□ -0.07
NEDD8-204ENST00000526430 CCDC184Q52MB2 194 aa14.61□□□□□ -0.07
NEDD8-204ENST00000526430 GCC1Q96CN9 775 aa14.61□□□□□ -0.07
NEDD8-204ENST00000526430 IL6STP40189 918 aaPredicted RBP14.6□□□□□ -0.07
NEDD8-204ENST00000526430 JDP2Q8WYK2 163 aa14.6□□□□□ -0.07
NEDD8-204ENST00000526430 PSMD1Q99460 953 aa14.6□□□□□ -0.07
NEDD8-204ENST00000526430 LGR6Q9HBX8 967 aa14.6□□□□□ -0.07
NEDD8-204ENST00000526430 RNMTO43148 476 aaKnown RBP14.59□□□□□ -0.07
NEDD8-204ENST00000526430 CAMTA2O94983 1202 aa14.59□□□□□ -0.07
NEDD8-204ENST00000526430 NOGQ13253 232 aa14.59□□□□□ -0.07
NEDD8-204ENST00000526430 CIAPIN1Q6FI81 312 aa14.59□□□□□ -0.07
NEDD8-204ENST00000526430 TBC1D2BQ9UPU7 963 aa14.59□□□□□ -0.07
NEDD8-204ENST00000526430 POLR2AP24928 1970 aaKnown RBP14.59□□□□□ -0.07
NEDD8-204ENST00000526430 EPS15P42566 896 aa14.58□□□□□ -0.08
NEDD8-204ENST00000526430 EIF6P56537 245 aaKnown RBP14.58□□□□□ -0.08
NEDD8-204ENST00000526430 SULT6B1Q6IMI4 303 aa14.58□□□□□ -0.08
NEDD8-204ENST00000526430 SYNE4Q8N205 404 aa14.58□□□□□ -0.08
NEDD8-204ENST00000526430 TEX13AQ9BXU3 409 aaPredicted RBP14.58□□□□□ -0.08
NEDD8-204ENST00000526430 SAGE1Q9NXZ1 904 aa14.58□□□□□ -0.08
NEDD8-204ENST00000526430 MYBBP1AQ9BQG0 1328 aaKnown RBP14.58□□□□□ -0.08
NEDD8-204ENST00000526430 OLFM4Q6UX06 510 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms