RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ZDHHC3Q9NYG2 299 aa8.59□□□□□ -1.03
SVIP-202ENST00000525670 SCHIP1Q9P0W5 487 aaPredicted RBP8.59□□□□□ -1.03
SVIP-202ENST00000525670 USP3Q9Y6I4 520 aa8.59□□□□□ -1.03
SVIP-202ENST00000525670 A0A1W2PNR3 127 aa8.58□□□□□ -1.04
SVIP-202ENST00000525670 CTBSQ01459 385 aa8.58□□□□□ -1.04
SVIP-202ENST00000525670 GOLGA6L1Q8N7Z2 621 aa8.58□□□□□ -1.04
SVIP-202ENST00000525670 GALNT6Q8NCL4 622 aa8.58□□□□□ -1.04
SVIP-202ENST00000525670 ARAP1Q96P48 1450 aa8.57□□□□□ -1.04
SVIP-202ENST00000525670 TTBK1Q5TCY1 1321 aaPredicted RBP8.57□□□□□ -1.04
SVIP-202ENST00000525670 NUP160Q12769 1436 aa8.57□□□□□ -1.04
SVIP-202ENST00000525670 ATXN7O15265 892 aaPredicted RBP8.57□□□□□ -1.04
SVIP-202ENST00000525670 ZIC5Q96T25 663 aa8.57□□□□□ -1.04
SVIP-202ENST00000525670 CARMIL1Q5VZK9 1371 aa8.57□□□□□ -1.04
SVIP-202ENST00000525670 USP17L3A6NCW0 530 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 USP17L4A6NCW7 530 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
SVIP-202ENST00000525670 ATP9BO43861 1147 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 EPHA4P54764 986 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 FOXK2Q01167 660 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 USP17L2Q6R6M4 530 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
SVIP-202ENST00000525670 USP17L1Q7RTZ2 530 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 EDARADDQ8WWZ3 215 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 UCN2Q96RP3 112 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
SVIP-202ENST00000525670 SHISA8B8ZZ34 492 aa8.55□□□□□ -1.04
SVIP-202ENST00000525670 TNP2Q05952 138 aa8.55□□□□□ -1.04
SVIP-202ENST00000525670 TEAD4Q15561 434 aa8.55□□□□□ -1.04
SVIP-202ENST00000525670 CTTNBP2Q8WZ74 1663 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 IGHA1P01876 353 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 ARAFP10398 606 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 MAPTP10636 758 aaKnown RBP8.54□□□□□ -1.04
SVIP-202ENST00000525670 NOS2P35228 1153 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 CCDC102BQ68D86 513 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 FNBP4Q8N3X1 1017 aaPredicted RBP8.54□□□□□ -1.04
SVIP-202ENST00000525670 TPCN2Q8NHX9 752 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 ZDHHC1Q8WTX9 485 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 L3MBTL2Q969R5 705 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 GGA1Q9UJY5 639 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 GJA3Q9Y6H8 435 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 SHROOM2Q13796 1616 aa8.54□□□□□ -1.04
SVIP-202ENST00000525670 RAPGEF2Q9Y4G8 1499 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
SVIP-202ENST00000525670 CLDN10P78369 228 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 FAM182BQ5T319 152 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 SAMD5Q5TGI4 173 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 CYB5RLQ6IPT4 315 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 BICDL1Q6ZP65 573 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 SLCO4C1Q6ZQN7 724 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 CLUAP1Q96AJ1 413 aa8.53□□□□□ -1.04
SVIP-202ENST00000525670 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
SVIP-202ENST00000525670 DCDC2BA2VCK2 349 aa8.52□□□□□ -1.05
SVIP-202ENST00000525670 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
SVIP-202ENST00000525670 TXLNAP40222 546 aa8.52□□□□□ -1.05
SVIP-202ENST00000525670 RANGAP1P46060 587 aaPredicted RBP8.52□□□□□ -1.05
SVIP-202ENST00000525670 GPAT2Q6NUI2 795 aa8.52□□□□□ -1.05
SVIP-202ENST00000525670 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
SVIP-202ENST00000525670 DCAF5Q96JK2 942 aa8.52□□□□□ -1.05
SVIP-202ENST00000525670 MKL2Q9ULH7 1088 aa8.52□□□□□ -1.05
SVIP-202ENST00000525670 KIAA1024Q9UPX6 916 aa8.52□□□□□ -1.05
SVIP-202ENST00000525670 PRG4Q92954 1404 aaPredicted RBP8.52□□□□□ -1.05
SVIP-202ENST00000525670 IQGAP2Q13576 1575 aa8.52□□□□□ -1.05
SVIP-202ENST00000525670 PALM3A6NDB9 673 aaPredicted RBP8.51□□□□□ -1.05
SVIP-202ENST00000525670 EML1O00423 815 aa8.51□□□□□ -1.05
SVIP-202ENST00000525670 FAM157BP0CG42 384 aa8.51□□□□□ -1.05
SVIP-202ENST00000525670 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
SVIP-202ENST00000525670 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
SVIP-202ENST00000525670 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
SVIP-202ENST00000525670 SERTM1A2A2V5 107 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 M0R2N6 131 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 EPXP11678 715 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 CD33P20138 364 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 TBCELQ5QJ74 424 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 C7orf43Q8WVR3 580 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 GLMNQ92990 594 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 RRAGCQ9HB90 399 aa8.5□□□□□ -1.05
SVIP-202ENST00000525670 AVENQ9NQS1 362 aaPredicted RBP8.5□□□□□ -1.05
SVIP-202ENST00000525670 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
SVIP-202ENST00000525670 NEURL1BA8MQ27 555 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 AMPD1P23109 780 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 ADH6P28332 368 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 LAMC2Q13753 1193 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 SIX5Q8N196 739 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 BTBD6Q96KE9 485 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
SVIP-202ENST00000525670 PRXQ9BXM0 1461 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 KIAA0586Q9BVV6 1533 aa8.49□□□□□ -1.05
SVIP-202ENST00000525670 NEUROD4Q9HD90 331 aa8.48□□□□□ -1.05
SVIP-202ENST00000525670 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
SVIP-202ENST00000525670 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
SVIP-202ENST00000525670 A6NJR5 290 aa8.47□□□□□ -1.05
SVIP-202ENST00000525670 EFSO43281 561 aa8.47□□□□□ -1.05
SVIP-202ENST00000525670 DKK1O94907 266 aa8.47□□□□□ -1.05
SVIP-202ENST00000525670 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
SVIP-202ENST00000525670 PSMA6P60900 246 aaKnown RBP8.47□□□□□ -1.05
SVIP-202ENST00000525670 PLA2G4EQ3MJ16 856 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms