RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 CBX8Q9HC52 389 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 ZCCHC17Q9NP64 241 aaKnown RBP13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 DLC1Q96QB1 1528 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 ST5P78524 1137 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 TWISTNBQ3B726 338 aaPredicted RBP13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 GORABQ5T7V8 394 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 TMEM87AQ8NBN3 555 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 ESYT1Q9BSJ8 1104 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 RPAP1Q9BWH6 1393 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 F13A1P00488 732 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 HMOX1P09601 288 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 ZNF75DP51815 510 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 FILIP1Q7Z7B0 1213 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 ORAI2Q96SN7 254 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 ABCC4O15439 1325 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 GTF2A1P52655 376 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 MAP3K11Q16584 847 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 ERO1AQ96HE7 468 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 FAM53CQ9NYF3 392 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
CLNS1A-204ENST00000525428 PDE1AP54750 535 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 DDX17Q92841 729 aaKnown RBP13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 SMC3Q9UQE7 1217 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 SLU7O95391 586 aaKnown RBP13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 SKILP12757 684 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 CPA1P15085 419 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 LIG1P18858 919 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 LRRFIP2Q9Y608 721 aaKnown RBP13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 FHOD1Q9Y613 1164 aa13.33□□□□□ -0.28
CLNS1A-204ENST00000525428 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 CLCN6P51797 869 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 ANKRD44Q8N8A2 993 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 CCDC191Q8NCU4 936 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 NUP62CLQ9H1M0 184 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 DNAJC25Q9H1X3 360 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 MYO1CO00159 1063 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 FOXO3O43524 673 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 PLA2G4AP47712 749 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 TEX35Q5T0J7 233 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 MEIS3Q99687 375 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 MBIPQ9NS73 344 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
CLNS1A-204ENST00000525428 ZNF335Q9H4Z2 1342 aaPredicted RBP13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 HTATSF1O43719 755 aaKnown RBP13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 SMARCE1Q969G3 411 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 TNMDQ9H2S6 317 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 CPS1P31327 1500 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 ARHGAP29Q52LW3 1261 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 LRRC8AQ8IWT6 810 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 EFCC1Q9HA90 598 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 DACT1Q9NYF0 836 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 POLKQ9UBT6 870 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 ATP6V1DQ9Y5K8 247 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 USP16Q9Y5T5 823 aa13.31□□□□□ -0.28
CLNS1A-204ENST00000525428 ERBB3P21860 1342 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 ATP7BP35670 1465 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 ZNF165P49910 485 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 GPATCH11Q8N954 259 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 IL25Q9H293 177 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 RAD50Q92878 1312 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 APPP05067 770 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 NOP2P46087 812 aaKnown RBP13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 CCDC83Q8IWF9 413 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 DDX54Q8TDD1 881 aaKnown RBP13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
CLNS1A-204ENST00000525428 GOLGA6L4A6NEF3 574 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 SEC31AO94979 1220 aaKnown RBP13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 CHRM1P11229 460 aaPredicted RBP13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 ZSCAN26Q16670 478 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 RGS12O14924 1447 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 AK2P54819 239 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 PLA2G4DQ86XP0 818 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 CHMLP26374 656 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 BRPF1P55201 1214 aaPredicted RBP13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 CCDC34Q96HJ3 373 aa13.29□□□□□ -0.28
CLNS1A-204ENST00000525428 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms