RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 HMGB2P26583 209 aaKnown RBP8.43□□□□□ -1.06
LINC00534-204ENST00000524361 IL13P35225 146 aa8.43□□□□□ -1.06
LINC00534-204ENST00000524361 CC2D1BQ5T0F9 858 aaKnown RBP8.43□□□□□ -1.06
LINC00534-204ENST00000524361 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
LINC00534-204ENST00000524361 RTCBQ9Y3I0 505 aaKnown RBP8.43□□□□□ -1.06
LINC00534-204ENST00000524361 SHANK3Q9BYB0 1731 aa8.43□□□□□ -1.06
LINC00534-204ENST00000524361 A0A0G2JLW4 131 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
LINC00534-204ENST00000524361 SLC34A2O95436 690 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 HSP90AB1P08238 724 aaKnown RBP8.42□□□□□ -1.06
LINC00534-204ENST00000524361 HMOX1P09601 288 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 RFC4P35249 363 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 AMOTQ4VCS5 1084 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 C1orf141Q5JVX7 400 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 ZMYND15Q9H091 742 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 LGR6Q9HBX8 967 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
LINC00534-204ENST00000524361 RPS6KA4O75676 772 aa8.41□□□□□ -1.06
LINC00534-204ENST00000524361 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
LINC00534-204ENST00000524361 SRP68Q9UHB9 627 aaKnown RBP8.41□□□□□ -1.06
LINC00534-204ENST00000524361 KIF7Q2M1P5 1343 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 NUDT7P0C024 238 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 GYS1P13807 737 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 CRKLP46109 303 aaKnown RBP8.4□□□□□ -1.06
LINC00534-204ENST00000524361 SLC39A6Q13433 755 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 NLGN1Q8N2Q7 840 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 TMC2Q8TDI7 906 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 GPBP1L1Q9HC44 474 aaPredicted RBP8.4□□□□□ -1.06
LINC00534-204ENST00000524361 BCS1LQ9Y276 419 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
LINC00534-204ENST00000524361 LY75O60449 1722 aa8.4□□□□□ -1.07
LINC00534-204ENST00000524361 KDM6AO15550 1401 aaPredicted RBP8.39□□□□□ -1.07
LINC00534-204ENST00000524361 DPEP1P16444 411 aa8.39□□□□□ -1.07
LINC00534-204ENST00000524361 RC3H1Q5TC82 1133 aaKnown RBP8.39□□□□□ -1.07
LINC00534-204ENST00000524361 ARHGAP27Q6ZUM4 889 aa8.39□□□□□ -1.07
LINC00534-204ENST00000524361 PARP3Q9Y6F1 533 aa8.39□□□□□ -1.07
LINC00534-204ENST00000524361 ATP10DQ9P241 1426 aa8.38□□□□□ -1.07
LINC00534-204ENST00000524361 KIF20BQ96Q89 1820 aa8.38□□□□□ -1.07
LINC00534-204ENST00000524361 TOGARAM1Q9Y4F4 1720 aa8.38□□□□□ -1.07
LINC00534-204ENST00000524361 PER1O15534 1290 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-204ENST00000524361 MTHFSDQ2M296 383 aaKnown RBP8.38□□□□□ -1.07
LINC00534-204ENST00000524361 AKAP4Q5JQC9 854 aa8.38□□□□□ -1.07
LINC00534-204ENST00000524361 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
LINC00534-204ENST00000524361 DNAJC10Q8IXB1 793 aa8.38□□□□□ -1.07
LINC00534-204ENST00000524361 C4BP0C0L5 1744 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 KDRP35968 1356 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 CNTNAP4Q9C0A0 1308 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 RNMTO43148 476 aaKnown RBP8.37□□□□□ -1.07
LINC00534-204ENST00000524361 DIAPH1O60610 1272 aaKnown RBP8.37□□□□□ -1.07
LINC00534-204ENST00000524361 FCHSD2O94868 740 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 TGFB2P61812 414 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 SLC52A2Q9HAB3 445 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 RYDENQ9NUL5 291 aaKnown RBP8.37□□□□□ -1.07
LINC00534-204ENST00000524361 CCDC87Q9NVE4 849 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 TUBGCP6Q96RT7 1819 aa8.37□□□□□ -1.07
LINC00534-204ENST00000524361 U2SURPO15042 1029 aaKnown RBP8.36□□□□□ -1.07
LINC00534-204ENST00000524361 KCNA3P22001 575 aa8.36□□□□□ -1.07
LINC00534-204ENST00000524361 CHRNA5P30532 468 aa8.36□□□□□ -1.07
LINC00534-204ENST00000524361 DDR1Q08345 913 aa8.36□□□□□ -1.07
LINC00534-204ENST00000524361 USPL1Q5W0Q7 1092 aa8.36□□□□□ -1.07
LINC00534-204ENST00000524361 POTEEQ6S8J3 1075 aa8.36□□□□□ -1.07
LINC00534-204ENST00000524361 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
LINC00534-204ENST00000524361 C5P01031 1676 aa8.36□□□□□ -1.07
LINC00534-204ENST00000524361 CYP19A1P11511 503 aaPredicted RBP8.35□□□□□ -1.07
LINC00534-204ENST00000524361 CANXP27824 592 aaKnown RBP8.35□□□□□ -1.07
LINC00534-204ENST00000524361 MAP2P11137 1827 aaKnown RBP8.35□□□□□ -1.07
LINC00534-204ENST00000524361 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 ZPR1O75312 459 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 TM4SF1P30408 202 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 FOXK1P85037 733 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 BICDL1Q6ZP65 573 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 IL17REQ8NFR9 667 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
LINC00534-204ENST00000524361 GPHNQ9NQX3 736 aaPredicted RBP8.34□□□□□ -1.07
LINC00534-204ENST00000524361 ZBTB1Q9Y2K1 713 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
LINC00534-204ENST00000524361 USP42Q9H9J4 1324 aaKnown RBP8.33□□□□□ -1.08
LINC00534-204ENST00000524361 PXDNLA1KZ92 1463 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 POLRMTO00411 1230 aaKnown RBP8.33□□□□□ -1.08
LINC00534-204ENST00000524361 NFIXQ14938 502 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 COL24A1Q17RW2 1714 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 C9orf131Q5VYM1 1079 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 ANKRD13DQ6ZTN6 518 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 PTCD2Q8WV60 388 aaKnown RBP8.33□□□□□ -1.08
LINC00534-204ENST00000524361 PIM2Q9P1W9 311 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
LINC00534-204ENST00000524361 ITGB4P16144 1822 aa8.33□□□□□ -1.08
LINC00534-204ENST00000524361 KCNQ3O43525 872 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 LSM11P83369 360 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC00534-204ENST00000524361 DSG2Q14126 1118 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 DALRD3Q5D0E6 543 aaKnown RBP8.32□□□□□ -1.08
LINC00534-204ENST00000524361 PLPP6Q8IY26 295 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 PHACTR3Q96KR7 559 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 BCL2L12Q9HB09 334 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 NMRK2Q9NPI5 230 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 ADCY9O60503 1353 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 ANKRD26Q9UPS8 1709 aa8.32□□□□□ -1.08
LINC00534-204ENST00000524361 SOS1Q07889 1333 aaPredicted RBP8.31□□□□□ -1.08
LINC00534-204ENST00000524361 C10orf71Q711Q0 1435 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms