RNA–Protein interactions for RNA: ENST00000523908.5

CLINT1-207, Transcript of clathrin interactor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLINT1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-207ENST00000523908 C9orf78Q9NZ63 289 aaPredicted RBP23.58■■□□□ 1.36
CLINT1-207ENST00000523908 OS9Q13438 667 aaPredicted RBP23.57■■□□□ 1.36
CLINT1-207ENST00000523908 SYAP1Q96A49 352 aaPredicted RBP23.57■■□□□ 1.36
CLINT1-207ENST00000523908 TMEM63CQ9P1W3 806 aa23.57■■□□□ 1.36
CLINT1-207ENST00000523908 TM6SF1Q9BZW5 370 aa23.56■■□□□ 1.36
CLINT1-207ENST00000523908 RBSNQ9H1K0 784 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 DIAPH3Q9NSV4 1193 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 RPAP1Q9BWH6 1393 aaPredicted RBP23.55■■□□□ 1.36
CLINT1-207ENST00000523908 HIP1O00291 1037 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 ANXA1P04083 346 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 PRIM1P49642 420 aaKnown RBP23.55■■□□□ 1.36
CLINT1-207ENST00000523908 ZSCAN30Q86W11 494 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 EVI5LQ96CN4 794 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 SNRKQ9NRH2 765 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 LIMCH1Q9UPQ0 1083 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
CLINT1-207ENST00000523908 GRM8O00222 908 aa23.54■■□□□ 1.36
CLINT1-207ENST00000523908 ORAI2Q96SN7 254 aa23.54■■□□□ 1.36
CLINT1-207ENST00000523908 ZBTB7CA1YPR0 619 aa23.54■■□□□ 1.36
CLINT1-207ENST00000523908 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
CLINT1-207ENST00000523908 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.54■■□□□ 1.36
CLINT1-207ENST00000523908 ERBB3P21860 1342 aa23.54■■□□□ 1.36
CLINT1-207ENST00000523908 C5P01031 1676 aa23.53■■□□□ 1.36
CLINT1-207ENST00000523908 MAP4K4O95819 1239 aaPredicted RBP23.53■■□□□ 1.36
CLINT1-207ENST00000523908 RBM27Q9P2N5 1060 aaKnown RBP23.53■■□□□ 1.36
CLINT1-207ENST00000523908 RGPD5Q99666 1765 aa23.53■■□□□ 1.36
CLINT1-207ENST00000523908 IFIT2P09913 472 aaKnown RBP23.53■■□□□ 1.36
CLINT1-207ENST00000523908 PHF14O94880 888 aa23.52■■□□□ 1.36
CLINT1-207ENST00000523908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.51■■□□□ 1.354e-7■■■□□ 15.3
CLINT1-207ENST00000523908 AK2P54819 239 aa23.51■■□□□ 1.35
CLINT1-207ENST00000523908 VPS53Q5VIR6 699 aa23.51■■□□□ 1.35
CLINT1-207ENST00000523908 CWC27Q6UX04 472 aaKnown RBP23.51■■□□□ 1.35
CLINT1-207ENST00000523908 RASEFQ8IZ41 740 aa23.51■■□□□ 1.35
CLINT1-207ENST00000523908 RBM33Q96EV2 1170 aaKnown RBP23.51■■□□□ 1.35
CLINT1-207ENST00000523908 PDIA6Q15084 440 aa23.5■■□□□ 1.35
CLINT1-207ENST00000523908 KRT28Q7Z3Y7 464 aa23.5■■□□□ 1.35
CLINT1-207ENST00000523908 ZSCAN31Q96LW9 406 aaPredicted RBP23.5■■□□□ 1.35
CLINT1-207ENST00000523908 COL15A1P39059 1388 aa23.5■■□□□ 1.35
CLINT1-207ENST00000523908 NOL8Q76FK4 1167 aaKnown RBP23.5■■□□□ 1.35
CLINT1-207ENST00000523908 SH2B1Q9NRF2 756 aaPredicted RBP23.5■■□□□ 1.35
CLINT1-207ENST00000523908 KDM6AO15550 1401 aaPredicted RBP23.49■■□□□ 1.35
CLINT1-207ENST00000523908 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
CLINT1-207ENST00000523908 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
CLINT1-207ENST00000523908 NSFL1CQ9UNZ2 370 aaKnown RBP23.49■■□□□ 1.35
CLINT1-207ENST00000523908 COL18A1P39060 1754 aa23.49■■□□□ 1.35
CLINT1-207ENST00000523908 PDIA4P13667 645 aaKnown RBP23.49■■□□□ 1.35
CLINT1-207ENST00000523908 KAZALD1Q96I82 304 aa23.49■■□□□ 1.35
CLINT1-207ENST00000523908 SUCLG2Q96I99 432 aa23.49■■□□□ 1.35
CLINT1-207ENST00000523908 AXIN2Q9Y2T1 843 aa23.49■■□□□ 1.35
CLINT1-207ENST00000523908 ZSCAN22P10073 491 aaPredicted RBP23.48■■□□□ 1.35
CLINT1-207ENST00000523908 CWF19L2Q2TBE0 894 aaKnown RBP23.48■■□□□ 1.35
CLINT1-207ENST00000523908 ZSWIM6Q9HCJ5 1215 aa23.48■■□□□ 1.35
CLINT1-207ENST00000523908 SYCE3A1L190 88 aa23.48■■□□□ 1.35
CLINT1-207ENST00000523908 ATP6V1DQ9Y5K8 247 aa23.48■■□□□ 1.35
CLINT1-207ENST00000523908 PKD1L3Q7Z443 1732 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 CCDC171Q6TFL3 1326 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 NPHP3Q7Z494 1330 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 FOXD4L5Q5VV16 416 aaPredicted RBP23.47■■□□□ 1.35
CLINT1-207ENST00000523908 AACSQ86V21 672 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 FOXD4L4Q8WXT5 416 aaPredicted RBP23.47■■□□□ 1.35
CLINT1-207ENST00000523908 SLC52A2Q9HAB3 445 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 DCCP43146 1447 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 G3BP1Q13283 466 aaKnown RBP eCLIP23.47■■□□□ 1.35
CLINT1-207ENST00000523908 ZNF790Q6PG37 636 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 CHAMP1Q96JM3 812 aa23.47■■□□□ 1.35
CLINT1-207ENST00000523908 NECTIN1Q15223 517 aa23.46■■□□□ 1.35
CLINT1-207ENST00000523908 BICC1Q9H694 974 aaKnown RBP23.46■■□□□ 1.35
CLINT1-207ENST00000523908 SPG7Q9UQ90 795 aa23.46■■□□□ 1.35
CLINT1-207ENST00000523908 JCADQ9P266 1359 aa23.46■■□□□ 1.35
CLINT1-207ENST00000523908 PARP4Q9UKK3 1724 aaKnown RBP23.46■■□□□ 1.35
CLINT1-207ENST00000523908 SASH1O94885 1247 aa23.45■■□□□ 1.35
CLINT1-207ENST00000523908 PA2G4Q9UQ80 394 aaKnown RBP23.45■■□□□ 1.35
CLINT1-207ENST00000523908 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
CLINT1-207ENST00000523908 MCM5P33992 734 aa23.45■■□□□ 1.34
CLINT1-207ENST00000523908 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
CLINT1-207ENST00000523908 TSPY26PQ9H489 355 aa23.45■■□□□ 1.34
CLINT1-207ENST00000523908 RFX7Q2KHR2 1363 aa23.45■■□□□ 1.34
CLINT1-207ENST00000523908 PRAMEF22A3QJZ6 481 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 STX6O43752 255 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 NAP1L5Q96NT1 182 aaPredicted RBP23.44■■□□□ 1.34
CLINT1-207ENST00000523908 NOL7Q9UMY1 257 aaKnown RBP23.44■■□□□ 1.34
CLINT1-207ENST00000523908 SMC3Q9UQE7 1217 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 CYP46A1Q9Y6A2 500 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 IGKV5-2P06315 115 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 PTH1RQ03431 593 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 USP48Q86UV5 1035 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 C19orf44Q9H6X5 657 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 LAMB4A4D0S4 1761 aa23.44■■□□□ 1.34
CLINT1-207ENST00000523908 ZKSCAN1P17029 563 aaPredicted RBP23.43■■□□□ 1.34
CLINT1-207ENST00000523908 XPCQ01831 940 aaPredicted RBP23.43■■□□□ 1.34
CLINT1-207ENST00000523908 FAM184AQ8NB25 1140 aa23.43■■□□□ 1.34
CLINT1-207ENST00000523908 MAP4K1Q92918 833 aa23.43■■□□□ 1.34
CLINT1-207ENST00000523908 PDRG1Q9NUG6 133 aa23.43■■□□□ 1.34
CLINT1-207ENST00000523908 NEURL1BA8MQ27 555 aa23.43■■□□□ 1.34
CLINT1-207ENST00000523908 LETM1O95202 739 aaPredicted RBP23.43■■□□□ 1.34
CLINT1-207ENST00000523908 PHKG2P15735 406 aa23.43■■□□□ 1.34
CLINT1-207ENST00000523908 MSNP26038 577 aaKnown RBP23.43■■□□□ 1.34
CLINT1-207ENST00000523908 CSPP1Q1MSJ5 1256 aa23.43■■□□□ 1.34
CLINT1-207ENST00000523908 METTL22Q9BUU2 404 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms