RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 ZNF500O60304 480 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 TSPY26PQ9H489 355 aa9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 RRP9O43818 475 aaKnown RBP9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 ARID3AQ99856 593 aa9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 BABAM1Q9NWV8 329 aa9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 TPM2P07951 284 aa9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 CASTP20810 708 aaKnown RBP9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 SYT1P21579 422 aa9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 CWF19L2Q2TBE0 894 aaKnown RBP9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 CNTROBQ8N137 903 aa9.66□□□□□ -0.86
TNFRSF10B-208ENST00000523752 KLHL34Q8N239 644 aa9.65□□□□□ -0.86
TNFRSF10B-208ENST00000523752 ST3GAL1Q11201 340 aa9.65□□□□□ -0.86
TNFRSF10B-208ENST00000523752 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF10B-208ENST00000523752 IP6K1Q92551 441 aa9.65□□□□□ -0.86
TNFRSF10B-208ENST00000523752 FER1L4A9Z1Z3 1794 aa9.65□□□□□ -0.87
TNFRSF10B-208ENST00000523752 BTBD11A6QL63 1104 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ZSCAN22P10073 491 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 FIBPO43427 364 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 RBM10P98175 930 aaKnown RBP9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ZNF530Q6P9A1 599 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 HYPKQ9NX55 129 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 PHF8Q9UPP1 1060 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 MAP3K2Q9Y2U5 619 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 STX6O43752 255 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 LIMCH1Q9UPQ0 1083 aa9.64□□□□□ -0.87
TNFRSF10B-208ENST00000523752 USP42Q9H9J4 1324 aaKnown RBP9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 TEFQ10587 303 aa9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ZNF830Q96NB3 372 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 DIAPH3Q9NSV4 1193 aa9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 USP25Q9UHP3 1055 aa9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 EPB41L2O43491 1005 aaKnown RBP9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 HCLS1P14317 486 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 TMEM87AQ8NBN3 555 aa9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 JAKMIP1Q96N16 626 aaKnown RBP9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
TNFRSF10B-208ENST00000523752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.63□□□□□ -0.872e-9■■■■■ 32.1
TNFRSF10B-208ENST00000523752 F13A1P00488 732 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 SYAP1Q96A49 352 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 KAZALD1Q96I82 304 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 FAM227BQ96M60 508 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 TAF6LQ9Y6J9 622 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 GLRX3O76003 335 aaKnown RBP9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 GJB2P29033 226 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 NECAB1Q8N987 351 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 KCNJ4P48050 445 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 MTX1Q13505 466 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 DNTTIP2Q5QJE6 756 aaKnown RBP9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 C9orf78Q9NZ63 289 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 TTC41PQ6P2S7 1318 aa9.62□□□□□ -0.87
TNFRSF10B-208ENST00000523752 HOXB7P09629 217 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 AKAP4Q5JQC9 854 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 CCDC183Q5T5S1 534 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 AACSQ86V21 672 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 CLASRPQ8N2M8 674 aaKnown RBP9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 C17orf53Q8N3J3 647 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 KLHDC4Q8TBB5 520 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 TCEANC2Q96MN5 208 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ECHDC1Q9NTX5 307 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 SASH1O94885 1247 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ME3Q16798 604 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 SUCLG2Q96I99 432 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 PDRG1Q9NUG6 133 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 DBF4Q9UBU7 674 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 MTMR6Q9Y217 621 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 UQCRHLA0A096LP55 91 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 RNMTO43148 476 aaKnown RBP9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 UQCRHP07919 91 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ESCO1Q5FWF5 840 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 EAF2Q96CJ1 260 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 CCDC8Q9H0W5 538 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 SIL1Q9H173 461 aa9.61□□□□□ -0.87
TNFRSF10B-208ENST00000523752 STRCQ7RTU9 1775 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 PHF14O94880 888 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 IFIT2P09913 472 aaKnown RBP9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 AIMP1Q12904 312 aaKnown RBP9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 NECTIN1Q15223 517 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 JARID2Q92833 1246 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 BICC1Q9H694 974 aaKnown RBP9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 CCDC171Q6TFL3 1326 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 AP5Z1O43299 807 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 UBE2HP62256 183 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 NMIQ13287 307 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 HSP90AB4PQ58FF6 505 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 FAM173BQ6P4H8 233 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 RBM8AQ9Y5S9 174 aaKnown RBP9.6□□□□□ -0.87
TNFRSF10B-208ENST00000523752 A0A0D9SFI3 127 aa9.59□□□□□ -0.87
TNFRSF10B-208ENST00000523752 VPS37CA5D8V6 355 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF10B-208ENST00000523752 PSME1Q06323 249 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms