RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
VIRMA-208ENST00000523263 IL17REQ8NFR9 667 aa12.8□□□□□ -0.36
VIRMA-208ENST00000523263 FMNL2Q96PY5 1086 aa12.8□□□□□ -0.36
VIRMA-208ENST00000523263 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
VIRMA-208ENST00000523263 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
VIRMA-208ENST00000523263 SLC34A2O95436 690 aa12.79□□□□□ -0.36
VIRMA-208ENST00000523263 NPR1P16066 1061 aa12.79□□□□□ -0.36
VIRMA-208ENST00000523263 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
VIRMA-208ENST00000523263 PNMA8AQ86V59 439 aaPredicted RBP12.79□□□□□ -0.36
VIRMA-208ENST00000523263 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
VIRMA-208ENST00000523263 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
VIRMA-208ENST00000523263 UBR2Q8IWV8 1755 aa12.79□□□□□ -0.36
VIRMA-208ENST00000523263 DICER1Q9UPY3 1922 aaKnown RBP12.78□□□□□ -0.36
VIRMA-208ENST00000523263 A1BGP04217 495 aa12.78□□□□□ -0.36
VIRMA-208ENST00000523263 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
VIRMA-208ENST00000523263 RTKN2Q8IZC4 609 aa12.78□□□□□ -0.36
VIRMA-208ENST00000523263 CCDC24Q8N4L8 307 aa12.78□□□□□ -0.36
VIRMA-208ENST00000523263 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
VIRMA-208ENST00000523263 PCNTO95613 3336 aa12.78□□□□□ -0.36
VIRMA-208ENST00000523263 FZD9O00144 591 aa12.77□□□□□ -0.37
VIRMA-208ENST00000523263 NPHP1O15259 732 aa12.77□□□□□ -0.37
VIRMA-208ENST00000523263 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
VIRMA-208ENST00000523263 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
VIRMA-208ENST00000523263 DZIP3Q86Y13 1208 aaKnown RBP12.77□□□□□ -0.37
VIRMA-208ENST00000523263 CEMIPQ8WUJ3 1361 aa12.77□□□□□ -0.37
VIRMA-208ENST00000523263 SCN7AQ01118 1682 aa12.77□□□□□ -0.37
VIRMA-208ENST00000523263 PER1O15534 1290 aaPredicted RBP12.76□□□□□ -0.37
VIRMA-208ENST00000523263 EPHX2P34913 555 aa12.76□□□□□ -0.37
VIRMA-208ENST00000523263 LBX1P52954 281 aa12.76□□□□□ -0.37
VIRMA-208ENST00000523263 CNTROBQ8N137 903 aa12.76□□□□□ -0.37
VIRMA-208ENST00000523263 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
VIRMA-208ENST00000523263 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
VIRMA-208ENST00000523263 HSPA8P11142 646 aaKnown RBP12.75□□□□□ -0.37
VIRMA-208ENST00000523263 COL11A2P13942 1736 aaPredicted RBP12.75□□□□□ -0.37
VIRMA-208ENST00000523263 ALDH1B1P30837 517 aa12.75□□□□□ -0.37
VIRMA-208ENST00000523263 SCN4AP35499 1836 aa12.75□□□□□ -0.37
VIRMA-208ENST00000523263 TPTE2Q6XPS3 522 aa12.75□□□□□ -0.37
VIRMA-208ENST00000523263 NBPF5PQ86XG9 351 aaPredicted RBP12.75□□□□□ -0.37
VIRMA-208ENST00000523263 GPC2Q8N158 579 aa12.75□□□□□ -0.37
VIRMA-208ENST00000523263 ABHD8Q96I13 439 aa12.75□□□□□ -0.37
VIRMA-208ENST00000523263 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
VIRMA-208ENST00000523263 WDR33Q9C0J8 1336 aaKnown RBP12.74□□□□□ -0.37
VIRMA-208ENST00000523263 ZNF541Q9H0D2 1346 aa12.74□□□□□ -0.37
VIRMA-208ENST00000523263 IARSP41252 1262 aaKnown RBP12.74□□□□□ -0.37
VIRMA-208ENST00000523263 RGS19P49795 217 aa12.74□□□□□ -0.37
VIRMA-208ENST00000523263 EAPPQ56P03 285 aaPredicted RBP12.74□□□□□ -0.37
VIRMA-208ENST00000523263 PSMD1Q99460 953 aa12.74□□□□□ -0.37
VIRMA-208ENST00000523263 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
VIRMA-208ENST00000523263 USP16Q9Y5T5 823 aa12.74□□□□□ -0.37
VIRMA-208ENST00000523263 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
VIRMA-208ENST00000523263 GRIPAP1Q4V328 841 aa12.73□□□□□ -0.37
VIRMA-208ENST00000523263 CC2D2BQ6DHV5 1058 aa12.73□□□□□ -0.37
VIRMA-208ENST00000523263 ZNF277Q9NRM2 450 aaPredicted RBP12.73□□□□□ -0.37
VIRMA-208ENST00000523263 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
VIRMA-208ENST00000523263 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
VIRMA-208ENST00000523263 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
VIRMA-208ENST00000523263 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
VIRMA-208ENST00000523263 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
VIRMA-208ENST00000523263 SYNE4Q8N205 404 aa12.72□□□□□ -0.37
VIRMA-208ENST00000523263 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
VIRMA-208ENST00000523263 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
VIRMA-208ENST00000523263 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
VIRMA-208ENST00000523263 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
VIRMA-208ENST00000523263 KCNQ3O43525 872 aa12.71□□□□□ -0.37
VIRMA-208ENST00000523263 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
VIRMA-208ENST00000523263 ECE1P42892 770 aa12.7□□□□□ -0.38
VIRMA-208ENST00000523263 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
VIRMA-208ENST00000523263 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
VIRMA-208ENST00000523263 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
VIRMA-208ENST00000523263 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
VIRMA-208ENST00000523263 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
VIRMA-208ENST00000523263 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
VIRMA-208ENST00000523263 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
VIRMA-208ENST00000523263 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
VIRMA-208ENST00000523263 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
VIRMA-208ENST00000523263 ABT1Q9ULW3 272 aaKnown RBP12.69□□□□□ -0.38
VIRMA-208ENST00000523263 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
VIRMA-208ENST00000523263 HOXA10P31260 410 aaPredicted RBP12.68□□□□□ -0.38
VIRMA-208ENST00000523263 MAP2K2P36507 400 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
VIRMA-208ENST00000523263 OLFM4Q6UX06 510 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 CAPNS2Q96L46 248 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 VPS33BQ9H267 617 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 SIPA1L3O60292 1781 aaPredicted RBP12.68□□□□□ -0.38
VIRMA-208ENST00000523263 BCORQ6W2J9 1755 aa12.68□□□□□ -0.38
VIRMA-208ENST00000523263 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
VIRMA-208ENST00000523263 ERVV-1B6SEH8 477 aa12.67□□□□□ -0.38
VIRMA-208ENST00000523263 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
VIRMA-208ENST00000523263 MLLT1Q03111 559 aaPredicted RBP12.67□□□□□ -0.38
VIRMA-208ENST00000523263 CC2D1BQ5T0F9 858 aaKnown RBP12.67□□□□□ -0.38
VIRMA-208ENST00000523263 GPR101Q96P66 508 aaPredicted RBP12.67□□□□□ -0.38
VIRMA-208ENST00000523263 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
VIRMA-208ENST00000523263 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
VIRMA-208ENST00000523263 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms