RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TRIM35Q9UPQ4 493 aa16.29■□□□□ 0.2
VEGFA-223ENST00000523125 CEP350Q5VT06 3117 aa16.29■□□□□ 0.2
VEGFA-223ENST00000523125 DICER1Q9UPY3 1922 aaKnown RBP16.28■□□□□ 0.2
VEGFA-223ENST00000523125 PDE6BP35913 854 aa16.28■□□□□ 0.2
VEGFA-223ENST00000523125 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.28e-10■□□□□ 9.2
VEGFA-223ENST00000523125 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
VEGFA-223ENST00000523125 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
VEGFA-223ENST00000523125 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
VEGFA-223ENST00000523125 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
VEGFA-223ENST00000523125 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
VEGFA-223ENST00000523125 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.2
VEGFA-223ENST00000523125 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
VEGFA-223ENST00000523125 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
VEGFA-223ENST00000523125 KIF3CO14782 793 aa16.26■□□□□ 0.19
VEGFA-223ENST00000523125 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-223ENST00000523125 PRELPP51888 382 aa16.26■□□□□ 0.19
VEGFA-223ENST00000523125 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
VEGFA-223ENST00000523125 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
VEGFA-223ENST00000523125 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 ERVV-1B6SEH8 477 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 SRGNP10124 158 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 MYL6BP14649 208 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 ST5P78524 1137 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 RASSF7Q02833 373 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-223ENST00000523125 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.193e-16■□□□□ 9
VEGFA-223ENST00000523125 RNF181Q9P0P0 153 aa16.25■□□□□ 0.19
VEGFA-223ENST00000523125 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
VEGFA-223ENST00000523125 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
VEGFA-223ENST00000523125 MAP3K15Q6ZN16 1313 aa16.24■□□□□ 0.19
VEGFA-223ENST00000523125 CHL1O00533 1208 aa16.24■□□□□ 0.19
VEGFA-223ENST00000523125 PDIA6Q15084 440 aa16.24■□□□□ 0.19
VEGFA-223ENST00000523125 ANKRD36CQ5JPF3 1778 aa16.23■□□□□ 0.19
VEGFA-223ENST00000523125 ERBB4Q15303 1308 aa16.23■□□□□ 0.19
VEGFA-223ENST00000523125 KLRG2A4D1S0 409 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-223ENST00000523125 NFKBIEO00221 500 aa16.23■□□□□ 0.19
VEGFA-223ENST00000523125 NPHP1O15259 732 aa16.23■□□□□ 0.19
VEGFA-223ENST00000523125 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
VEGFA-223ENST00000523125 TPTE2Q6XPS3 522 aa16.23■□□□□ 0.19
VEGFA-223ENST00000523125 SENP3-EIF4A1A0A087X0R7 540 aa16.22■□□□□ 0.19
VEGFA-223ENST00000523125 C21orf2O43822 256 aa16.22■□□□□ 0.19
VEGFA-223ENST00000523125 PROSER3Q2NL68 480 aa16.22■□□□□ 0.19
VEGFA-223ENST00000523125 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
VEGFA-223ENST00000523125 FAM177BA6PVY3 158 aa16.21■□□□□ 0.19
VEGFA-223ENST00000523125 EIF2S2P20042 333 aaKnown RBP16.21■□□□□ 0.19
VEGFA-223ENST00000523125 LMNB1P20700 586 aa16.21■□□□□ 0.19
VEGFA-223ENST00000523125 KRT24Q2M2I5 525 aa16.21■□□□□ 0.19
VEGFA-223ENST00000523125 CCDC184Q52MB2 194 aa16.21■□□□□ 0.19
VEGFA-223ENST00000523125 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
VEGFA-223ENST00000523125 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
VEGFA-223ENST00000523125 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.19
VEGFA-223ENST00000523125 UBN2Q6ZU65 1347 aa16.2■□□□□ 0.18
VEGFA-223ENST00000523125 ANXA1P04083 346 aa16.2■□□□□ 0.18
VEGFA-223ENST00000523125 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
VEGFA-223ENST00000523125 CNKSR1Q969H4 720 aa16.2■□□□□ 0.18
VEGFA-223ENST00000523125 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-223ENST00000523125 APAF1O14727 1248 aa16.19■□□□□ 0.18
VEGFA-223ENST00000523125 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
VEGFA-223ENST00000523125 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
VEGFA-223ENST00000523125 C7orf43Q8WVR3 580 aa16.19■□□□□ 0.18
VEGFA-223ENST00000523125 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
VEGFA-223ENST00000523125 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
VEGFA-223ENST00000523125 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
VEGFA-223ENST00000523125 NPR1P16066 1061 aa16.18■□□□□ 0.18
VEGFA-223ENST00000523125 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
VEGFA-223ENST00000523125 LAMB2P55268 1798 aa16.18■□□□□ 0.18
VEGFA-223ENST00000523125 ZC3H4Q9UPT8 1303 aaKnown RBP16.18■□□□□ 0.18
VEGFA-223ENST00000523125 IBTKQ9P2D0 1353 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-223ENST00000523125 GPTP24298 496 aa16.17■□□□□ 0.18
VEGFA-223ENST00000523125 ERFEQ4G0M1 354 aa16.17■□□□□ 0.18
VEGFA-223ENST00000523125 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
VEGFA-223ENST00000523125 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
VEGFA-223ENST00000523125 NYXQ9GZU5 481 aa16.17■□□□□ 0.18
VEGFA-223ENST00000523125 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
VEGFA-223ENST00000523125 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
VEGFA-223ENST00000523125 TOMM70O94826 608 aa16.16■□□□□ 0.18
VEGFA-223ENST00000523125 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
VEGFA-223ENST00000523125 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
VEGFA-223ENST00000523125 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
VEGFA-223ENST00000523125 RIC1Q4ADV7 1423 aa16.16■□□□□ 0.18
VEGFA-223ENST00000523125 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
VEGFA-223ENST00000523125 NTSR2O95665 410 aa16.15■□□□□ 0.18
VEGFA-223ENST00000523125 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
VEGFA-223ENST00000523125 CRY2Q49AN0 593 aa16.15■□□□□ 0.18
VEGFA-223ENST00000523125 MBIPQ9NS73 344 aa16.15■□□□□ 0.18
VEGFA-223ENST00000523125 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
VEGFA-223ENST00000523125 HSPA6P17066 643 aa16.14■□□□□ 0.17
VEGFA-223ENST00000523125 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
VEGFA-223ENST00000523125 RRAGCQ9HB90 399 aa16.14■□□□□ 0.17
VEGFA-223ENST00000523125 WDR90Q96KV7 1748 aa16.14■□□□□ 0.17
VEGFA-223ENST00000523125 HOXB7P09629 217 aa16.13■□□□□ 0.17
VEGFA-223ENST00000523125 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
VEGFA-223ENST00000523125 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
VEGFA-223ENST00000523125 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
VEGFA-223ENST00000523125 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
VEGFA-223ENST00000523125 CHPF2Q9P2E5 772 aa16.13■□□□□ 0.17
VEGFA-223ENST00000523125 SNED1Q8TER0 1413 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 ALDH1B1P30837 517 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms