RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 TOMM70O94826 608 aa24.28■■□□□ 1.48
TOP1MT-216ENST00000522121 HSPA6P17066 643 aa24.28■■□□□ 1.48
TOP1MT-216ENST00000522121 TPTE2Q6XPS3 522 aa24.28■■□□□ 1.48
TOP1MT-216ENST00000522121 CNKSR1Q969H4 720 aa24.28■■□□□ 1.48
TOP1MT-216ENST00000522121 TSPYL4Q9UJ04 414 aa24.28■■□□□ 1.48
TOP1MT-216ENST00000522121 KDM3BQ7LBC6 1761 aa24.27■■□□□ 1.48
TOP1MT-216ENST00000522121 STYK1Q6J9G0 422 aa24.27■■□□□ 1.48
TOP1MT-216ENST00000522121 NGEFQ8N5V2 710 aa24.27■■□□□ 1.48
TOP1MT-216ENST00000522121 RRP7AQ9Y3A4 280 aaKnown RBP24.27■■□□□ 1.48
TOP1MT-216ENST00000522121 ZC3H4Q9UPT8 1303 aaKnown RBP24.27■■□□□ 1.48
TOP1MT-216ENST00000522121 C21orf2O43822 256 aa24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 SRGNP10124 158 aa24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 TMPOP42166 694 aaKnown RBP24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 WDR43Q15061 677 aaKnown RBP eCLIP24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 C16orf71Q8IYS4 520 aaPredicted RBP24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 MASTLQ96GX5 879 aa24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 ZNF219Q9P2Y4 722 aaPredicted RBP24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 LAMB4A4D0S4 1761 aa24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 ANKRD31Q8N7Z5 1873 aa24.26■■□□□ 1.47
TOP1MT-216ENST00000522121 BABAM1Q9NWV8 329 aa24.25■■□□□ 1.47
TOP1MT-216ENST00000522121 ERVV-1B6SEH8 477 aa24.24■■□□□ 1.47
TOP1MT-216ENST00000522121 HLFQ16534 295 aa24.24■■□□□ 1.47
TOP1MT-216ENST00000522121 KIF6Q6ZMV9 814 aa24.24■■□□□ 1.47
TOP1MT-216ENST00000522121 FAM177BA6PVY3 158 aa24.23■■□□□ 1.47
TOP1MT-216ENST00000522121 NFKBIEO00221 500 aa24.23■■□□□ 1.47
TOP1MT-216ENST00000522121 MYL6BP14649 208 aa24.23■■□□□ 1.47
TOP1MT-216ENST00000522121 GTF2E1P29083 439 aaPredicted RBP24.23■■□□□ 1.47
TOP1MT-216ENST00000522121 ERBB4Q15303 1308 aa24.22■■□□□ 1.47
TOP1MT-216ENST00000522121 MAP3K15Q6ZN16 1313 aa24.22■■□□□ 1.47
TOP1MT-216ENST00000522121 NEUROD2Q15784 382 aa24.22■■□□□ 1.47
TOP1MT-216ENST00000522121 SOGA3Q5TF21 947 aa24.22■■□□□ 1.47
TOP1MT-216ENST00000522121 PRPF40BQ6NWY9 871 aaKnown RBP24.22■■□□□ 1.47
TOP1MT-216ENST00000522121 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
TOP1MT-216ENST00000522121 PRELPP51888 382 aa24.21■■□□□ 1.47
TOP1MT-216ENST00000522121 RUNDC1Q96C34 613 aa24.21■■□□□ 1.47
TOP1MT-216ENST00000522121 RRAGCQ9HB90 399 aa24.21■■□□□ 1.47
TOP1MT-216ENST00000522121 SBF1O95248 1867 aa24.21■■□□□ 1.47
TOP1MT-216ENST00000522121 COL11A2P13942 1736 aaPredicted RBP24.21■■□□□ 1.47
TOP1MT-216ENST00000522121 NPR1P16066 1061 aa24.2■■□□□ 1.46
TOP1MT-216ENST00000522121 RBM46Q8TBY0 533 aaKnown RBP24.2■■□□□ 1.46
TOP1MT-216ENST00000522121 NYXQ9GZU5 481 aa24.2■■□□□ 1.46
TOP1MT-216ENST00000522121 GLTPD2A6NH11 291 aa24.19■■□□□ 1.46
TOP1MT-216ENST00000522121 TTLL7Q6ZT98 887 aa24.19■■□□□ 1.46
TOP1MT-216ENST00000522121 PRKRIP1Q9H875 184 aaPredicted RBP24.19■■□□□ 1.46
TOP1MT-216ENST00000522121 KLRG2A4D1S0 409 aaPredicted RBP24.18■■□□□ 1.46
TOP1MT-216ENST00000522121 EIF2S2P20042 333 aaKnown RBP24.18■■□□□ 1.46
TOP1MT-216ENST00000522121 TAOK3Q9H2K8 898 aa24.18■■□□□ 1.46
TOP1MT-216ENST00000522121 ZBTB3Q9H5J0 574 aa24.18■■□□□ 1.46
TOP1MT-216ENST00000522121 LTBP3Q9NS15 1303 aa24.17■■□□□ 1.46
TOP1MT-216ENST00000522121 ADAMTS8Q9UP79 889 aa24.17■■□□□ 1.46
TOP1MT-216ENST00000522121 APLP1P51693 650 aa24.16■■□□□ 1.46
TOP1MT-216ENST00000522121 ERFEQ4G0M1 354 aa24.16■■□□□ 1.46
TOP1MT-216ENST00000522121 DPY19L2Q6NUT2 758 aa24.16■■□□□ 1.46
TOP1MT-216ENST00000522121 VEGFAP15692 232 aaPredicted RBP24.14■■□□□ 1.45
TOP1MT-216ENST00000522121 ALDH1B1P30837 517 aa24.14■■□□□ 1.45
TOP1MT-216ENST00000522121 FSTL1Q12841 308 aa24.14■■□□□ 1.45
TOP1MT-216ENST00000522121 CCDC93Q567U6 631 aa24.14■■□□□ 1.45
TOP1MT-216ENST00000522121 GIGYF2Q6Y7W6 1299 aaKnown RBP24.14■■□□□ 1.45
TOP1MT-216ENST00000522121 LAS1LQ9Y4W2 734 aaKnown RBP24.14■■□□□ 1.45
TOP1MT-216ENST00000522121 TNRC6CQ9HCJ0 1690 aaKnown RBP24.14■■□□□ 1.45
TOP1MT-216ENST00000522121 GPTP24298 496 aa24.13■■□□□ 1.45
TOP1MT-216ENST00000522121 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
TOP1MT-216ENST00000522121 SLX4Q8IY92 1834 aa24.12■■□□□ 1.45
TOP1MT-216ENST00000522121 CHL1O00533 1208 aa24.12■■□□□ 1.45
TOP1MT-216ENST00000522121 PDIA6Q15084 440 aa24.12■■□□□ 1.45
TOP1MT-216ENST00000522121 NUTM1Q86Y26 1132 aa24.12■■□□□ 1.45
TOP1MT-216ENST00000522121 C7orf43Q8WVR3 580 aa24.12■■□□□ 1.45
TOP1MT-216ENST00000522121 CEP350Q5VT06 3117 aa24.12■■□□□ 1.45
TOP1MT-216ENST00000522121 PPP1R42Q7Z4L9 355 aa24.11■■□□□ 1.45
TOP1MT-216ENST00000522121 ZNF34Q8IZ26 560 aa24.11■■□□□ 1.45
TOP1MT-216ENST00000522121 IBTKQ9P2D0 1353 aaPredicted RBP24.11■■□□□ 1.45
TOP1MT-216ENST00000522121 UBN2Q6ZU65 1347 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 TIAM2Q8IVF5 1701 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 PARP10Q53GL7 1025 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 SUSD4Q5VX71 490 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 RTKN2Q8IZC4 609 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 SMC1BQ8NDV3 1235 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 NECTIN2Q92692 538 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 FER1L6Q2WGJ9 1857 aa24.1■■□□□ 1.45
TOP1MT-216ENST00000522121 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
TOP1MT-216ENST00000522121 CRY2Q49AN0 593 aa24.09■■□□□ 1.45
TOP1MT-216ENST00000522121 LRP10Q7Z4F1 713 aa24.09■■□□□ 1.45
TOP1MT-216ENST00000522121 RPGRQ92834 1020 aaKnown RBP24.09■■□□□ 1.45
TOP1MT-216ENST00000522121 NUP98P52948 1817 aa24.08■■□□□ 1.45
TOP1MT-216ENST00000522121 ABCC12Q96J65 1359 aa24.08■■□□□ 1.45
TOP1MT-216ENST00000522121 ANXA1P04083 346 aa24.08■■□□□ 1.45
TOP1MT-216ENST00000522121 FKBP4Q02790 459 aaKnown RBP eCLIP24.08■■□□□ 1.45
TOP1MT-216ENST00000522121 PROSER3Q2NL68 480 aa24.08■■□□□ 1.45
TOP1MT-216ENST00000522121 RIC1Q4ADV7 1423 aa24.07■■□□□ 1.44
TOP1MT-216ENST00000522121 CACNA1SQ13698 1873 aa24.07■■□□□ 1.44
TOP1MT-216ENST00000522121 CCDC88AQ3V6T2 1871 aa24.07■■□□□ 1.44
TOP1MT-216ENST00000522121 NTSR2O95665 410 aa24.06■■□□□ 1.44
TOP1MT-216ENST00000522121 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
TOP1MT-216ENST00000522121 AIMP1Q12904 312 aaKnown RBP24.06■■□□□ 1.44
TOP1MT-216ENST00000522121 HSP90AB3PQ58FF7 597 aa24.06■■□□□ 1.44
TOP1MT-216ENST00000522121 COPS6Q7L5N1 327 aa24.06■■□□□ 1.44
TOP1MT-216ENST00000522121 DDX21Q9NR30 783 aaKnown RBP eCLIP24.06■■□□□ 1.44
TOP1MT-216ENST00000522121 KRT24Q2M2I5 525 aa24.05■■□□□ 1.44
TOP1MT-216ENST00000522121 XAGE3Q8WTP9 111 aa24.05■■□□□ 1.44
TOP1MT-216ENST00000522121 CFAP44Q96MT7 982 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms