RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 LMNB1P20700 586 aa7.52□□□□□ -1.21
SDC2-206ENST00000521590 KCNH5Q8NCM2 988 aa7.52□□□□□ -1.21
SDC2-206ENST00000521590 AK7Q96M32 723 aa7.52□□□□□ -1.21
SDC2-206ENST00000521590 DLEC1Q9Y238 1755 aa7.51□□□□□ -1.21
SDC2-206ENST00000521590 FAM208AQ9UK61 1670 aaKnown RBP7.51□□□□□ -1.21
SDC2-206ENST00000521590 HMGB2P26583 209 aaKnown RBP7.51□□□□□ -1.21
SDC2-206ENST00000521590 KCNK17Q96T54 332 aa7.51□□□□□ -1.21
SDC2-206ENST00000521590 PITPNM2Q9BZ72 1349 aa7.51□□□□□ -1.21
SDC2-206ENST00000521590 PALLDQ8WX93 1383 aa7.5□□□□□ -1.21
SDC2-206ENST00000521590 FER1L6Q2WGJ9 1857 aa7.5□□□□□ -1.21
SDC2-206ENST00000521590 CCDC87Q9NVE4 849 aa7.5□□□□□ -1.21
SDC2-206ENST00000521590 CUL9Q8IWT3 2517 aa7.5□□□□□ -1.21
SDC2-206ENST00000521590 TRPM7Q96QT4 1865 aa7.49□□□□□ -1.21
SDC2-206ENST00000521590 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
SDC2-206ENST00000521590 VPS9D1Q9Y2B5 631 aa7.49□□□□□ -1.21
SDC2-206ENST00000521590 CHRNA5P30532 468 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 HS6ST3Q8IZP7 471 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 NLGN1Q8N2Q7 840 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 OXER1Q8TDS5 423 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 ANKRD24Q8TF21 1146 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 GPR101Q96P66 508 aaPredicted RBP7.48□□□□□ -1.21
SDC2-206ENST00000521590 BEGAINQ9BUH8 593 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 UNC80Q8N2C7 3258 aa7.48□□□□□ -1.21
SDC2-206ENST00000521590 AFDNP55196 1824 aaKnown RBP7.48□□□□□ -1.21
SDC2-206ENST00000521590 NFKBIEO00221 500 aa7.47□□□□□ -1.21
SDC2-206ENST00000521590 TBC1D12O60347 775 aa7.47□□□□□ -1.21
SDC2-206ENST00000521590 TMF1P82094 1093 aa7.47□□□□□ -1.21
SDC2-206ENST00000521590 SLC17A8Q8NDX2 589 aa7.47□□□□□ -1.21
SDC2-206ENST00000521590 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
SDC2-206ENST00000521590 CAPNS2Q96L46 248 aa7.47□□□□□ -1.21
SDC2-206ENST00000521590 CABP1Q9NZU7 370 aa7.47□□□□□ -1.21
SDC2-206ENST00000521590 DDNO94850 711 aaPredicted RBP7.46□□□□□ -1.22
SDC2-206ENST00000521590 GYS1P13807 737 aa7.46□□□□□ -1.22
SDC2-206ENST00000521590 PTPN5P54829 565 aa7.46□□□□□ -1.22
SDC2-206ENST00000521590 NBPF15Q8N660 670 aa7.46□□□□□ -1.22
SDC2-206ENST00000521590 TTC21BQ7Z4L5 1316 aa7.46□□□□□ -1.22
SDC2-206ENST00000521590 MYH14Q7Z406 1995 aaKnown RBP7.46□□□□□ -1.22
SDC2-206ENST00000521590 COL5A3P25940 1745 aaPredicted RBP7.45□□□□□ -1.22
SDC2-206ENST00000521590 GNPATO15228 680 aa7.45□□□□□ -1.22
SDC2-206ENST00000521590 AOC2O75106 756 aa7.45□□□□□ -1.22
SDC2-206ENST00000521590 NKX1-1Q15270 411 aaPredicted RBP7.45□□□□□ -1.22
SDC2-206ENST00000521590 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
SDC2-206ENST00000521590 ZNF454Q8N9F8 522 aa7.45□□□□□ -1.22
SDC2-206ENST00000521590 TAF1DQ9H5J8 278 aaPredicted RBP7.45□□□□□ -1.22
SDC2-206ENST00000521590 PARP3Q9Y6F1 533 aa7.45□□□□□ -1.22
SDC2-206ENST00000521590 MEGF6O75095 1541 aa7.45□□□□□ -1.22
SDC2-206ENST00000521590 BHMG1C9JSJ3 638 aaPredicted RBP7.44□□□□□ -1.22
SDC2-206ENST00000521590 CA12O43570 354 aa7.44□□□□□ -1.22
SDC2-206ENST00000521590 MAP2K2P36507 400 aa7.44□□□□□ -1.22
SDC2-206ENST00000521590 ITPK1Q13572 414 aa7.44□□□□□ -1.22
SDC2-206ENST00000521590 MPRIPQ6WCQ1 1025 aa7.44□□□□□ -1.22
SDC2-206ENST00000521590 STAC3Q96MF2 364 aa7.44□□□□□ -1.22
SDC2-206ENST00000521590 ABT1Q9ULW3 272 aaKnown RBP7.44□□□□□ -1.22
SDC2-206ENST00000521590 CENPFP49454 3210 aa7.44□□□□□ -1.22
SDC2-206ENST00000521590 ECE1P42892 770 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 SRPK2P78362 688 aaKnown RBP7.43□□□□□ -1.22
SDC2-206ENST00000521590 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 CNTROBQ8N137 903 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 ARHGEF1Q92888 912 aaKnown RBP7.43□□□□□ -1.22
SDC2-206ENST00000521590 SMARCC1Q92922 1105 aaPredicted RBP7.43□□□□□ -1.22
SDC2-206ENST00000521590 CRISPLD2Q9H0B8 497 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 BCL2L12Q9HB09 334 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 ZNF831Q5JPB2 1677 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 NRXN2Q9P2S2 1712 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 BRCA2P51587 3418 aa7.43□□□□□ -1.22
SDC2-206ENST00000521590 MON2Q7Z3U7 1717 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 LOC102724428A0A0B4J2F2 783 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 FOSBP53539 338 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 SIK1P57059 783 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 FMR1Q06787 632 aaKnown RBP eCLIP7.42□□□□□ -1.22
SDC2-206ENST00000521590 DDR1Q08345 913 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 NBPF1Q3BBV0 1214 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 ERFEQ4G0M1 354 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 MAP1SQ66K74 1059 aaPredicted RBP7.42□□□□□ -1.22
SDC2-206ENST00000521590 SLC4A5Q9BY07 1137 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 TTC21AQ8NDW8 1320 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 CACNA1SQ13698 1873 aa7.42□□□□□ -1.22
SDC2-206ENST00000521590 IQCA1LA6NCM1 817 aa7.41□□□□□ -1.22
SDC2-206ENST00000521590 GRM1Q13255 1194 aa7.41□□□□□ -1.22
SDC2-206ENST00000521590 CST9Q5W186 159 aa7.41□□□□□ -1.22
SDC2-206ENST00000521590 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
SDC2-206ENST00000521590 PIGBQ92521 554 aa7.41□□□□□ -1.22
SDC2-206ENST00000521590 DDX21Q9NR30 783 aaKnown RBP eCLIP7.41□□□□□ -1.22
SDC2-206ENST00000521590 SCN11AQ9UI33 1791 aa7.41□□□□□ -1.22
SDC2-206ENST00000521590 AKAP11Q9UKA4 1901 aa7.4□□□□□ -1.22
SDC2-206ENST00000521590 RANBP2P49792 3224 aaKnown RBP7.4□□□□□ -1.22
SDC2-206ENST00000521590 BRPF1P55201 1214 aaPredicted RBP7.4□□□□□ -1.22
SDC2-206ENST00000521590 EAPPQ56P03 285 aaPredicted RBP7.4□□□□□ -1.22
SDC2-206ENST00000521590 PPP1R15BQ5SWA1 713 aa7.4□□□□□ -1.22
SDC2-206ENST00000521590 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
SDC2-206ENST00000521590 USP31Q70CQ4 1352 aa7.4□□□□□ -1.22
SDC2-206ENST00000521590 PAXIP1Q6ZW49 1069 aaPredicted RBP7.39□□□□□ -1.23
SDC2-206ENST00000521590 TTLL6Q8N841 843 aa7.39□□□□□ -1.23
SDC2-206ENST00000521590 IP6K1Q92551 441 aa7.39□□□□□ -1.23
SDC2-206ENST00000521590 MPHOSPH9Q99550 1183 aa7.39□□□□□ -1.23
SDC2-206ENST00000521590 RTCBQ9Y3I0 505 aaKnown RBP7.39□□□□□ -1.23
SDC2-206ENST00000521590 TLL2Q9Y6L7 1015 aa7.39□□□□□ -1.23
SDC2-206ENST00000521590 HTTP42858 3142 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms