RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ABHD17AQ96GS6 310 aa10.18□□□□□ -0.78
PABPC1-216ENST00000520868 ZNF594Q96JF6 807 aaPredicted RBP10.18□□□□□ -0.78
PABPC1-216ENST00000520868 CFHR5Q9BXR6 569 aa10.18□□□□□ -0.78
PABPC1-216ENST00000520868 ZMYND15Q9H091 742 aa10.18□□□□□ -0.78
PABPC1-216ENST00000520868 NSFL1CQ9UNZ2 370 aaKnown RBP10.18□□□□□ -0.78
PABPC1-216ENST00000520868 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
PABPC1-216ENST00000520868 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
PABPC1-216ENST00000520868 LMOD1P29536 600 aaPredicted RBP10.17□□□□□ -0.78
PABPC1-216ENST00000520868 FOXK2Q01167 660 aa10.17□□□□□ -0.78
PABPC1-216ENST00000520868 ZDHHC1Q8WTX9 485 aa10.17□□□□□ -0.78
PABPC1-216ENST00000520868 SHROOM2Q13796 1616 aa10.16□□□□□ -0.78
PABPC1-216ENST00000520868 BNIP3LO60238 219 aa10.16□□□□□ -0.78
PABPC1-216ENST00000520868 FAM69CQ0P6D2 419 aa10.16□□□□□ -0.78
PABPC1-216ENST00000520868 FIGNL1Q6PIW4 674 aa10.16□□□□□ -0.78
PABPC1-216ENST00000520868 SLC9A9Q8IVB4 645 aa10.16□□□□□ -0.78
PABPC1-216ENST00000520868 VRTNQ9H8Y1 702 aa10.16□□□□□ -0.78
PABPC1-216ENST00000520868 HCN2Q9UL51 889 aa10.16□□□□□ -0.78
PABPC1-216ENST00000520868 TXLNAP40222 546 aa10.15□□□□□ -0.78
PABPC1-216ENST00000520868 TEAD4Q15561 434 aa10.15□□□□□ -0.78
PABPC1-216ENST00000520868 NLRP8Q86W28 1048 aa10.15□□□□□ -0.78
PABPC1-216ENST00000520868 KLRG1Q96E93 195 aa10.15□□□□□ -0.78
PABPC1-216ENST00000520868 NDFIP2Q9NV92 336 aa10.15□□□□□ -0.78
PABPC1-216ENST00000520868 CHMP3Q9Y3E7 222 aa10.15□□□□□ -0.78
PABPC1-216ENST00000520868 FAM196BA6NMK8 535 aa10.14□□□□□ -0.79
PABPC1-216ENST00000520868 C2CD2LO14523 706 aa10.14□□□□□ -0.79
PABPC1-216ENST00000520868 SEC13P55735 322 aa10.14□□□□□ -0.79
PABPC1-216ENST00000520868 ARSJQ5FYB0 599 aaPredicted RBP10.14□□□□□ -0.79
PABPC1-216ENST00000520868 KANK4Q5T7N3 995 aaPredicted RBP10.14□□□□□ -0.79
PABPC1-216ENST00000520868 SH3PXD2AQ5TCZ1 1133 aa10.14□□□□□ -0.79
PABPC1-216ENST00000520868 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
PABPC1-216ENST00000520868 ATXN7L1Q9ULK2 861 aaPredicted RBP10.14□□□□□ -0.79
PABPC1-216ENST00000520868 NOS2P35228 1153 aa10.13□□□□□ -0.79
PABPC1-216ENST00000520868 PSMA6P60900 246 aaKnown RBP10.13□□□□□ -0.79
PABPC1-216ENST00000520868 CTBSQ01459 385 aa10.13□□□□□ -0.79
PABPC1-216ENST00000520868 ZCCHC2Q9C0B9 1178 aaKnown RBP10.13□□□□□ -0.79
PABPC1-216ENST00000520868 A0A1W2PNR3 127 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 SERTM1A2A2V5 107 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 SFI1A8K8P3 1242 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 DKK1O94907 266 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 MAP3K10Q02779 954 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 KCNMA1Q12791 1236 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 PTK7Q13308 1070 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 ZNF232Q9UNY5 417 aa10.12□□□□□ -0.79
PABPC1-216ENST00000520868 TTBK1Q5TCY1 1321 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-216ENST00000520868 BCRP11274 1271 aa10.11□□□□□ -0.79
PABPC1-216ENST00000520868 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-216ENST00000520868 CFAP70Q5T0N1 1121 aa10.11□□□□□ -0.79
PABPC1-216ENST00000520868 BICDL1Q6ZP65 573 aa10.11□□□□□ -0.79
PABPC1-216ENST00000520868 C1orf229Q6ZS94 237 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-216ENST00000520868 TSEN2Q8NCE0 465 aaKnown RBP10.11□□□□□ -0.79
PABPC1-216ENST00000520868 ZIC5Q96T25 663 aa10.11□□□□□ -0.79
PABPC1-216ENST00000520868 TSPAN10Q9H1Z9 355 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-216ENST00000520868 PCDHGC4Q9Y5F7 938 aa10.11□□□□□ -0.79
PABPC1-216ENST00000520868 GPC6Q9Y625 555 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-216ENST00000520868 GJA3Q9Y6H8 435 aa10.11□□□□□ -0.79
PABPC1-216ENST00000520868 DCDC2BA2VCK2 349 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L15C9J2P7 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L10C9JJH3 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L13C9JLJ4 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L12C9JPN9 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L11C9JVI0 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L21D6R901 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L18D6R9N7 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L22D6RA61 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L17D6RBQ6 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L19D6RCP7 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L20D6RJB6 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 FGFR3P22607 806 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 MAP2K3P46734 347 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 MARSP56192 900 aaKnown RBP10.1□□□□□ -0.79
PABPC1-216ENST00000520868 USP17L24Q0WX57 530 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 GAS2L2Q8NHY3 880 aa10.1□□□□□ -0.79
PABPC1-216ENST00000520868 OXCT2Q9BYC2 517 aaPredicted RBP10.1□□□□□ -0.79
PABPC1-216ENST00000520868 LGR5O75473 907 aa10.09□□□□□ -0.79
PABPC1-216ENST00000520868 IRS1P35568 1242 aa10.09□□□□□ -0.79
PABPC1-216ENST00000520868 DPYDQ12882 1025 aa10.09□□□□□ -0.79
PABPC1-216ENST00000520868 ANKMY2Q8IV38 441 aa10.09□□□□□ -0.79
PABPC1-216ENST00000520868 ABCC10Q5T3U5 1492 aa10.09□□□□□ -0.79
PABPC1-216ENST00000520868 KIF13AQ9H1H9 1805 aa10.08□□□□□ -0.8
PABPC1-216ENST00000520868 EML1O00423 815 aa10.08□□□□□ -0.8
PABPC1-216ENST00000520868 ATXN7O15265 892 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-216ENST00000520868 PPP1R12BO60237 982 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-216ENST00000520868 HIRAP54198 1017 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-216ENST00000520868 RASSF7Q02833 373 aa10.08□□□□□ -0.8
PABPC1-216ENST00000520868 ENAMQ9NRM1 1142 aa10.08□□□□□ -0.8
PABPC1-216ENST00000520868 CNTNAP5Q8WYK1 1306 aa10.07□□□□□ -0.8
PABPC1-216ENST00000520868 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
PABPC1-216ENST00000520868 BMP4P12644 408 aa10.07□□□□□ -0.8
PABPC1-216ENST00000520868 HINFPQ9BQA5 517 aa10.07□□□□□ -0.8
PABPC1-216ENST00000520868 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
PABPC1-216ENST00000520868 KHNYNO15037 678 aaKnown RBP10.06□□□□□ -0.8
PABPC1-216ENST00000520868 OIP5O43482 229 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
PABPC1-216ENST00000520868 CD33P20138 364 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 RFX1P22670 979 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 C1orf53Q5VUE5 145 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 POTEAQ6S8J7 498 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 STAG2Q8N3U4 1231 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms