RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 HSPA1BP0DMV9 641 aaKnown RBP9.98□□□□□ -0.81
PVT1-206ENST00000517838 EIF4A2Q14240 407 aaKnown RBP9.98□□□□□ -0.81
PVT1-206ENST00000517838 L3MBTL3Q96JM7 780 aaPredicted RBP9.98□□□□□ -0.81
PVT1-206ENST00000517838 PKD1L3Q7Z443 1732 aa9.97□□□□□ -0.81
PVT1-206ENST00000517838 POLRMTO00411 1230 aaKnown RBP9.97□□□□□ -0.81
PVT1-206ENST00000517838 TM4SF1P30408 202 aa9.97□□□□□ -0.81
PVT1-206ENST00000517838 CRKLP46109 303 aaKnown RBP9.97□□□□□ -0.81
PVT1-206ENST00000517838 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
PVT1-206ENST00000517838 USP42Q9H9J4 1324 aaKnown RBP9.97□□□□□ -0.81
PVT1-206ENST00000517838 WDR90Q96KV7 1748 aa9.96□□□□□ -0.81
PVT1-206ENST00000517838 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.81
PVT1-206ENST00000517838 ITGB4P16144 1822 aa9.96□□□□□ -0.81
PVT1-206ENST00000517838 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.81
PVT1-206ENST00000517838 GLTPD2A6NH11 291 aa9.96□□□□□ -0.82
PVT1-206ENST00000517838 VEGFAP15692 232 aaPredicted RBP9.96□□□□□ -0.82
PVT1-206ENST00000517838 CABP4P57796 275 aa9.96□□□□□ -0.82
PVT1-206ENST00000517838 RASSF7Q02833 373 aa9.96□□□□□ -0.82
PVT1-206ENST00000517838 INTS5Q6P9B9 1019 aaKnown RBP9.96□□□□□ -0.82
PVT1-206ENST00000517838 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
PVT1-206ENST00000517838 C4AP0C0L4 1744 aa9.96□□□□□ -0.82
PVT1-206ENST00000517838 POTECB2RU33 542 aa9.95□□□□□ -0.82
PVT1-206ENST00000517838 HSP90AB1P08238 724 aaKnown RBP9.95□□□□□ -0.82
PVT1-206ENST00000517838 CDCA8Q53HL2 280 aa9.95□□□□□ -0.82
PVT1-206ENST00000517838 NFATC2IPQ8NCF5 419 aa9.95□□□□□ -0.82
PVT1-206ENST00000517838 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
PVT1-206ENST00000517838 KDM6AO15550 1401 aaPredicted RBP9.94□□□□□ -0.82
PVT1-206ENST00000517838 ZC3H4Q9UPT8 1303 aaKnown RBP9.94□□□□□ -0.82
PVT1-206ENST00000517838 LMNB1P20700 586 aa9.94□□□□□ -0.82
PVT1-206ENST00000517838 TNNT2P45379 298 aaPredicted RBP9.94□□□□□ -0.82
PVT1-206ENST00000517838 PLEKHO1Q53GL0 409 aaPredicted RBP9.94□□□□□ -0.82
PVT1-206ENST00000517838 MTHFSP49914 203 aa9.93□□□□□ -0.82
PVT1-206ENST00000517838 CNGB1Q14028 1251 aaPredicted RBP9.93□□□□□ -0.82
PVT1-206ENST00000517838 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
PVT1-206ENST00000517838 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
PVT1-206ENST00000517838 NFKBIEO00221 500 aa9.92□□□□□ -0.82
PVT1-206ENST00000517838 ZPR1O75312 459 aa9.92□□□□□ -0.82
PVT1-206ENST00000517838 NFIXQ14938 502 aa9.92□□□□□ -0.82
PVT1-206ENST00000517838 AMOTQ4VCS5 1084 aa9.92□□□□□ -0.82
PVT1-206ENST00000517838 AEBP1Q8IUX7 1158 aa9.91□□□□□ -0.82
PVT1-206ENST00000517838 DNAJC10Q8IXB1 793 aa9.91□□□□□ -0.82
PVT1-206ENST00000517838 MICALL2Q8IY33 904 aa9.91□□□□□ -0.82
PVT1-206ENST00000517838 TTLL6Q8N841 843 aa9.91□□□□□ -0.82
PVT1-206ENST00000517838 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
PVT1-206ENST00000517838 SOS1Q07889 1333 aaPredicted RBP9.9□□□□□ -0.82
PVT1-206ENST00000517838 C1orf141Q5JVX7 400 aa9.9□□□□□ -0.82
PVT1-206ENST00000517838 C3orf67Q6ZVT6 689 aa9.9□□□□□ -0.82
PVT1-206ENST00000517838 SERPINB2P05120 415 aa9.89□□□□□ -0.83
PVT1-206ENST00000517838 CYP19A1P11511 503 aaPredicted RBP9.89□□□□□ -0.83
PVT1-206ENST00000517838 C2CD5Q86YS7 1000 aa9.89□□□□□ -0.83
PVT1-206ENST00000517838 MRS2Q9HD23 443 aa9.89□□□□□ -0.83
PVT1-206ENST00000517838 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.89□□□□□ -0.83
PVT1-206ENST00000517838 MKRN1Q9UHC7 482 aaKnown RBP9.89□□□□□ -0.83
PVT1-206ENST00000517838 NARFQ9UHQ1 456 aa9.89□□□□□ -0.83
PVT1-206ENST00000517838 ZNF831Q5JPB2 1677 aa9.89□□□□□ -0.83
PVT1-206ENST00000517838 BRCA1P38398 1863 aaKnown RBP9.89□□□□□ -0.83
PVT1-206ENST00000517838 FOXN1O15353 648 aa9.88□□□□□ -0.83
PVT1-206ENST00000517838 NEFLP07196 543 aa9.88□□□□□ -0.83
PVT1-206ENST00000517838 HNRNPUQ00839 825 aaKnown RBP eCLIP9.88□□□□□ -0.83
PVT1-206ENST00000517838 LGR6Q9HBX8 967 aa9.88□□□□□ -0.83
PVT1-206ENST00000517838 COL5A3P25940 1745 aaPredicted RBP9.87□□□□□ -0.83
PVT1-206ENST00000517838 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 MYH14Q7Z406 1995 aaKnown RBP9.87□□□□□ -0.83
PVT1-206ENST00000517838 G3V3G9 751 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 H0YIN7 160 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 PPP1R37O75864 691 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 SLC39A6Q13433 755 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 SULT6B1Q6IMI4 303 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 SLAIN1Q8ND83 568 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
PVT1-206ENST00000517838 ZBTB1Q9Y2K1 713 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 CARMIL3Q8ND23 1372 aa9.87□□□□□ -0.83
PVT1-206ENST00000517838 TNRC6CQ9HCJ0 1690 aaKnown RBP9.87□□□□□ -0.83
PVT1-206ENST00000517838 KIF20BQ96Q89 1820 aa9.86□□□□□ -0.83
PVT1-206ENST00000517838 C21orf2O43822 256 aa9.86□□□□□ -0.83
PVT1-206ENST00000517838 DDNO94850 711 aaPredicted RBP9.86□□□□□ -0.83
PVT1-206ENST00000517838 ERFEQ4G0M1 354 aa9.86□□□□□ -0.83
PVT1-206ENST00000517838 SLC52A2Q9HAB3 445 aa9.86□□□□□ -0.83
PVT1-206ENST00000517838 PRDM10Q9NQV6 1147 aa9.86□□□□□ -0.83
PVT1-206ENST00000517838 ANKRD26Q9UPS8 1709 aa9.86□□□□□ -0.83
PVT1-206ENST00000517838 SLC34A2O95436 690 aa9.85□□□□□ -0.83
PVT1-206ENST00000517838 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
PVT1-206ENST00000517838 BICDL1Q6ZP65 573 aa9.85□□□□□ -0.83
PVT1-206ENST00000517838 FAM9BQ8IZU0 186 aa9.85□□□□□ -0.83
PVT1-206ENST00000517838 CCDC24Q8N4L8 307 aa9.85□□□□□ -0.83
PVT1-206ENST00000517838 RYDENQ9NUL5 291 aaKnown RBP9.85□□□□□ -0.83
PVT1-206ENST00000517838 COL15A1P39059 1388 aa9.85□□□□□ -0.83
PVT1-206ENST00000517838 ADAMTS7Q9UKP4 1686 aa9.84□□□□□ -0.83
PVT1-206ENST00000517838 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
PVT1-206ENST00000517838 CANXP27824 592 aaKnown RBP9.84□□□□□ -0.83
PVT1-206ENST00000517838 IL13P35225 146 aa9.84□□□□□ -0.83
PVT1-206ENST00000517838 VEGFBP49765 207 aa9.84□□□□□ -0.83
PVT1-206ENST00000517838 ZNF622Q969S3 477 aaKnown RBP eCLIP9.84□□□□□ -0.832e-7■■■■□ 24.3
PVT1-206ENST00000517838 BRIP1Q9BX63 1249 aa9.84□□□□□ -0.83
PVT1-206ENST00000517838 CNTNAP1P78357 1384 aa9.84□□□□□ -0.83
PVT1-206ENST00000517838 PASKQ96RG2 1323 aa9.83□□□□□ -0.84
PVT1-206ENST00000517838 RNMTO43148 476 aaKnown RBP9.83□□□□□ -0.84
PVT1-206ENST00000517838 CTCFP49711 727 aaPredicted RBP9.83□□□□□ -0.84
PVT1-206ENST00000517838 EIF5P55010 431 aaKnown RBP9.83□□□□□ -0.84
PVT1-206ENST00000517838 TBC1D9BQ66K14 1250 aa9.83□□□□□ -0.84
PVT1-206ENST00000517838 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms