RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PTPRCP08575 1304 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 TJP1Q07157 1748 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SLC4A10Q6U841 1118 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 CLEC4GQ6UXB4 293 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 KSR2Q6VAB6 950 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PPP1R42Q7Z4L9 355 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 MRPL50Q8N5N7 158 aaKnown RBP6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 MTFR1LQ9H019 292 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PHAXQ9H814 394 aaKnown RBP6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SPON1Q9HCB6 807 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 MAP3K15Q6ZN16 1313 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PNPLA7Q6ZV29 1317 aa6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 USP42Q9H9J4 1324 aaKnown RBP6.91□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RREB1Q92766 1687 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 LAMB4A4D0S4 1761 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PI4KAP2A4QPH2 592 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 FAM177BA6PVY3 158 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RGL2O15211 777 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PDIA6Q15084 440 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PROSER3Q2NL68 480 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PARP10Q53GL7 1025 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 GIGYF2Q6Y7W6 1299 aaKnown RBP6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 TTLL7Q6ZT98 887 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SMIM5Q71RC9 77 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NBPF5PQ86XG9 351 aaPredicted RBP6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 KLHL34Q8N239 644 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PI4KAP1Q8N8J0 262 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 MYD88Q99836 296 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NYXQ9GZU5 481 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 CHMP4BQ9H444 224 aaKnown RBP6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SRP68Q9UHB9 627 aaKnown RBP6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NOB1Q9ULX3 412 aaKnown RBP6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 HDAC5Q9UQL6 1122 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NIP7Q9Y221 180 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ATF5Q9Y2D1 282 aaPredicted RBP6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 MAP3K2Q9Y2U5 619 aa6.9□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NUP188Q5SRE5 1749 aa6.9□□□□□ -1.31
SCARNA16.4-201ENST00000516956 BCAR3O75815 825 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CAMTA2O94983 1202 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 MMP10P09238 476 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 GYS1P13807 737 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 GPTP24298 496 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ST5P78524 1137 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TCIRG1Q13488 830 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TPTE2Q6XPS3 522 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 G2E3Q7L622 706 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 DNAAF4Q8WXU2 420 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ARHGAP45Q92619 1136 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 METTL22Q9BUU2 404 aaPredicted RBP6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 SRCIN1Q9C0H9 1055 aa6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 C9orf78Q9NZ63 289 aaPredicted RBP6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CICQ96RK0 1608 aaPredicted RBP6.89□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TAF1LQ8IZX4 1826 aa6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 COL5A3P25940 1745 aaPredicted RBP6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ATP5J2-PTCD1G3V325 749 aa6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CCT4P50991 539 aaKnown RBP6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 FKBP8Q14318 412 aa6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 HLFQ16534 295 aa6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ATF7IPQ6VMQ6 1270 aa6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 DZIP1LQ8IYY4 767 aaKnown RBP6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CNBD1Q8NA66 436 aa6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 UTP14AQ9BVJ6 771 aaKnown RBP6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CWC25Q9NXE8 425 aaPredicted RBP6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TRMT112Q9UI30 125 aaKnown RBP6.88□□□□□ -1.31
SCARNA16.4-201ENST00000516956 EP400Q96L91 3159 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CARMIL3Q8ND23 1372 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 DCAF8L1A6NGE4 600 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 F6X3S4 739 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ALDH1L1O75891 902 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 SERPINB2P05120 415 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 NEFLP07196 543 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 BRPF1P55201 1214 aaPredicted RBP6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 NFIXQ14938 502 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TBC1D9BQ66K14 1250 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CCDC191Q8NCU4 936 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 LINS1Q8NG48 757 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CLUAP1Q96AJ1 413 aa6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TMX4Q9H1E5 349 aaPredicted RBP6.87□□□□□ -1.31
SCARNA16.4-201ENST00000516956 RNF123Q5XPI4 1314 aa6.86□□□□□ -1.31
SCARNA16.4-201ENST00000516956 PDE6BP35913 854 aa6.86□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TRIM28Q13263 835 aaKnown RBP6.86□□□□□ -1.31
SCARNA16.4-201ENST00000516956 AMIGO3Q86WK7 504 aa6.86□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ITPRIPQ8IWB1 547 aa6.86□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ZNF34Q8IZ26 560 aa6.86□□□□□ -1.31
SCARNA16.4-201ENST00000516956 PDZRN3Q9UPQ7 1066 aa6.86□□□□□ -1.31
SCARNA16.4-201ENST00000516956 SH3TC1Q8TE82 1336 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 GNAI3P08754 354 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TM4SF1P30408 202 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CWF19L2Q2TBE0 894 aaKnown RBP6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 RTL5Q5HYW3 569 aaPredicted RBP6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 SUSD4Q5VX71 490 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 LRP10Q7Z4F1 713 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 NLRP10Q86W26 655 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ZBTB38Q8NAP3 1195 aaPredicted RBP6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 RPGRQ92834 1020 aaKnown RBP6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 NLRP3Q96P20 1036 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms