RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 RTL1A6NKG5 1358 aa1.72□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 DDX60Q8IY21 1712 aaKnown RBP1.71□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 CGNL1Q0VF96 1302 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PCDH11XQ9BZA7 1347 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PCDH11YQ9BZA8 1340 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 LTBP3Q9NS15 1303 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ZC3H4Q9UPT8 1303 aaKnown RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 WDR87Q6ZQQ6 2873 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 BRWD1Q9NSI6 2320 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TMEM88BA6NKF7 163 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 FAM155AB1AL88 458 aaPredicted RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 NBPF26B4DH59 902 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ERVV-2B6SEH9 535 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 FZD9O00144 591 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PTCD1O75127 700 aaKnown RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CAMTA2O94983 1202 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 EGFRP00533 1210 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SRGNP10124 158 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TATP17735 454 aaPredicted RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ADRA2BP18089 450 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RFC4P35249 363 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 EPS15P42566 896 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PIP4K2AP48426 406 aaPredicted RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 AMPHP49418 695 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 FXR1P51114 621 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SCNN1DP51172 638 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SOX10P56693 466 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 DEFB115Q30KQ5 88 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 NBPF10Q6P3W6 841 aaKnown RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 C2CD5Q86YS7 1000 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 IFNL2Q8IZJ0 200 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CNTROBQ8N137 903 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 NBPF15Q8N660 670 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TTLL6Q8N841 843 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RAPGEF4Q8WZA2 1011 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 COG3Q96JB2 828 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CAPNS2Q96L46 248 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PUS7Q96PZ0 661 aaKnown RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RBM42Q9BTD8 480 aaKnown RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 DDX21Q9NR30 783 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ZNF277Q9NRM2 450 aaPredicted RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TMOD3Q9NYL9 352 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PGAP2Q9UHJ9 254 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 NARFQ9UHQ1 456 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PARP3Q9Y6F1 533 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ROCK2O75116 1388 aaKnown RBP1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 FLT4P35916 1363 aa1.71□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TRIOO75962 3097 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SPTBN4Q9H254 2564 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ASTN2O75129 1339 aaPredicted RBP1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RNF123Q5XPI4 1314 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PIEZO1Q92508 2521 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 LRRC37AA6NMS7 1700 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 YDJCA8MPS7 323 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 MGAMO43451 1857 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 A1BGP04217 495 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 EPHX2P34913 555 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 IL13P35225 146 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 NEUROD1Q13562 356 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 HLFQ16534 295 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ERFEQ4G0M1 354 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CIAPIN1Q6FI81 312 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PRPF40BQ6NWY9 871 aaKnown RBP1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 BICDL1Q6ZP65 573 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SAPCD2Q86UD0 394 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SMG6Q86US8 1419 aaKnown RBP1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 LDHDQ86WU2 507 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 C16orf71Q8IYS4 520 aaPredicted RBP1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SYNE4Q8N205 404 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 IL17REQ8NFR9 667 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ZNF496Q96IT1 587 aaPredicted RBP1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 GPR101Q96P66 508 aaPredicted RBP1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 GLIS2Q9BZE0 524 aaPredicted RBP1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 KCNQ5Q9NR82 932 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TBC1D2BQ9UPU7 963 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TLL2Q9Y6L7 1015 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CHD9Q3L8U1 2897 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 OTOFQ9HC10 1997 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 COL15A1P39059 1388 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 KIF24Q5T7B8 1368 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ABCC12Q96J65 1359 aa1.7□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 COL3A1P02461 1466 aaPredicted RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CHD7Q9P2D1 2997 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ECM29Q5VYK3 1845 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SPEF2Q9C093 1822 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 POTEFA5A3E0 1075 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 WTIPA6NIX2 430 aaPredicted RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 H0YIN7 160 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RNMTO43148 476 aaKnown RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CANXP27824 592 aaKnown RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CABP4P57796 275 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CXCL9Q07325 125 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 DGKZQ13574 1117 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 MTHFSDQ2M296 383 aaKnown RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 EAPPQ56P03 285 aaPredicted RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 HABP4Q5JVS0 413 aaKnown RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ZNF530Q6P9A1 599 aaPredicted RBP1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 MOB2Q70IA6 237 aa1.69□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 LRP10Q7Z4F1 713 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms