RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
CDK7-213ENST00000515391 NECTIN2Q92692 538 aa17.11■□□□□ 0.33
CDK7-213ENST00000515391 ANKRD31Q8N7Z5 1873 aa17.1■□□□□ 0.33
CDK7-213ENST00000515391 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
CDK7-213ENST00000515391 ANP32CO43423 234 aa17.1■□□□□ 0.33
CDK7-213ENST00000515391 ANXA1P04083 346 aa17.1■□□□□ 0.33
CDK7-213ENST00000515391 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
CDK7-213ENST00000515391 CLEC4GQ6UXB4 293 aa17.09■□□□□ 0.33
CDK7-213ENST00000515391 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDK7-213ENST00000515391 ZNF652Q9Y2D9 606 aa17.09■□□□□ 0.33
CDK7-213ENST00000515391 H0YIN7 160 aa17.08■□□□□ 0.32
CDK7-213ENST00000515391 NPHP1O15259 732 aa17.08■□□□□ 0.32
CDK7-213ENST00000515391 PDIA6Q15084 440 aa17.08■□□□□ 0.32
CDK7-213ENST00000515391 PROSER3Q2NL68 480 aa17.08■□□□□ 0.32
CDK7-213ENST00000515391 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
CDK7-213ENST00000515391 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
CDK7-213ENST00000515391 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
CDK7-213ENST00000515391 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
CDK7-213ENST00000515391 NBPF5PQ86XG9 351 aaPredicted RBP17.07■□□□□ 0.32
CDK7-213ENST00000515391 BRIP1Q9BX63 1249 aa17.07■□□□□ 0.32
CDK7-213ENST00000515391 ZBTB3Q9H5J0 574 aa17.07■□□□□ 0.32
CDK7-213ENST00000515391 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
CDK7-213ENST00000515391 KIF6Q6ZMV9 814 aa17.06■□□□□ 0.32
CDK7-213ENST00000515391 LRP10Q7Z4F1 713 aa17.06■□□□□ 0.32
CDK7-213ENST00000515391 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
CDK7-213ENST00000515391 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDK7-213ENST00000515391 UTRNP46939 3433 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 DLEC1Q9Y238 1755 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 PDE6BP35913 854 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 ST5P78524 1137 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
CDK7-213ENST00000515391 TTLL6Q8N841 843 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 NUP98P52948 1817 aa17.05■□□□□ 0.32
CDK7-213ENST00000515391 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
CDK7-213ENST00000515391 ADCY9O60503 1353 aa17.04■□□□□ 0.32
CDK7-213ENST00000515391 ERBB4Q15303 1308 aa17.04■□□□□ 0.32
CDK7-213ENST00000515391 GPTP24298 496 aa17.04■□□□□ 0.32
CDK7-213ENST00000515391 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
CDK7-213ENST00000515391 ERVV-1B6SEH8 477 aa17.03■□□□□ 0.32
CDK7-213ENST00000515391 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
CDK7-213ENST00000515391 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
CDK7-213ENST00000515391 GOLGB1Q14789 3259 aaKnown RBP17.02■□□□□ 0.32
CDK7-213ENST00000515391 RGL2O15211 777 aa17.02■□□□□ 0.32
CDK7-213ENST00000515391 RASSF7Q02833 373 aa17.02■□□□□ 0.32
CDK7-213ENST00000515391 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.32
CDK7-213ENST00000515391 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
CDK7-213ENST00000515391 TPTE2Q6XPS3 522 aa17.02■□□□□ 0.32
CDK7-213ENST00000515391 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
CDK7-213ENST00000515391 COPS6Q7L5N1 327 aa17.01■□□□□ 0.31
CDK7-213ENST00000515391 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
CDK7-213ENST00000515391 XAGE3Q8WTP9 111 aa17.01■□□□□ 0.31
CDK7-213ENST00000515391 CHPF2Q9P2E5 772 aa17.01■□□□□ 0.31
CDK7-213ENST00000515391 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
CDK7-213ENST00000515391 C21orf2O43822 256 aa17■□□□□ 0.31
CDK7-213ENST00000515391 SRGNP10124 158 aa17■□□□□ 0.31
CDK7-213ENST00000515391 GTF2E1P29083 439 aaPredicted RBP17■□□□□ 0.31
CDK7-213ENST00000515391 GNAI1P63096 354 aa17■□□□□ 0.31
CDK7-213ENST00000515391 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
CDK7-213ENST00000515391 SUSD4Q5VX71 490 aa17■□□□□ 0.31
CDK7-213ENST00000515391 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
CDK7-213ENST00000515391 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
CDK7-213ENST00000515391 IFT57Q9NWB7 429 aa17■□□□□ 0.31
CDK7-213ENST00000515391 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
CDK7-213ENST00000515391 CACNA1SQ13698 1873 aa16.99■□□□□ 0.31
CDK7-213ENST00000515391 PRELPP51888 382 aa16.99■□□□□ 0.31
CDK7-213ENST00000515391 ERFEQ4G0M1 354 aa16.99■□□□□ 0.31
CDK7-213ENST00000515391 ZNF34Q8IZ26 560 aa16.99■□□□□ 0.31
CDK7-213ENST00000515391 GPBP1L1Q9HC44 474 aaPredicted RBP16.99■□□□□ 0.31
CDK7-213ENST00000515391 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
CDK7-213ENST00000515391 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
CDK7-213ENST00000515391 STYK1Q6J9G0 422 aa16.98■□□□□ 0.31
CDK7-213ENST00000515391 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
CDK7-213ENST00000515391 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
CDK7-213ENST00000515391 MASTLQ96GX5 879 aa16.98■□□□□ 0.31
CDK7-213ENST00000515391 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
CDK7-213ENST00000515391 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
CDK7-213ENST00000515391 SBF1O95248 1867 aa16.97■□□□□ 0.31
CDK7-213ENST00000515391 HOXB7P09629 217 aa16.97■□□□□ 0.31
CDK7-213ENST00000515391 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
CDK7-213ENST00000515391 FAM9BQ8IZU0 186 aa16.97■□□□□ 0.31
CDK7-213ENST00000515391 TNRC6CQ9HCJ0 1690 aaKnown RBP16.97■□□□□ 0.31
CDK7-213ENST00000515391 NFKBIEO00221 500 aa16.96■□□□□ 0.31
CDK7-213ENST00000515391 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
CDK7-213ENST00000515391 PRPF40BQ6NWY9 871 aaKnown RBP16.96■□□□□ 0.31
CDK7-213ENST00000515391 WWC1Q8IX03 1113 aa16.96■□□□□ 0.31
CDK7-213ENST00000515391 TSR2Q969E8 191 aaKnown RBP16.96■□□□□ 0.31
CDK7-213ENST00000515391 CNKSR1Q969H4 720 aa16.96■□□□□ 0.31
CDK7-213ENST00000515391 NYXQ9GZU5 481 aa16.96■□□□□ 0.31
CDK7-213ENST00000515391 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
CDK7-213ENST00000515391 NTSR2O95665 410 aa16.95■□□□□ 0.3
CDK7-213ENST00000515391 NPR1P16066 1061 aa16.95■□□□□ 0.3
CDK7-213ENST00000515391 DBF4Q9UBU7 674 aaPredicted RBP16.95■□□□□ 0.3
CDK7-213ENST00000515391 CCDC88AQ3V6T2 1871 aa16.95■□□□□ 0.3
CDK7-213ENST00000515391 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
CDK7-213ENST00000515391 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
CDK7-213ENST00000515391 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
CDK7-213ENST00000515391 C3orf67Q6ZVT6 689 aa16.93■□□□□ 0.3
CDK7-213ENST00000515391 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms